TBGR-Browse-Bju-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
A06_LINE_81	Retrotransposons	LINE	LINE	174	19364215	19364388	+
A06_LINE_82	Retrotransposons	LINE	LINE	88	19364486	19364573	+
A06_LINE_83	Retrotransposons	LINE	LINE	364	24801965	24802328	+
A06_LINE_84	Retrotransposons	LINE	LINE	102	25292433	25292534	+
A06_LINE_85	Retrotransposons	LINE	LINE	102	30895609	30895710	+
A07_LINE_86	Retrotransposons	LINE	LINE	120	5329539	5329658	+
A07_LINE_87	Retrotransposons	LINE	LINE	114	11741733	11741846	-
A07_LINE_88	Retrotransposons	LINE	LINE	83	11862889	11862971	+
A07_LINE_89	Retrotransposons	LINE	LINE	87	12926939	12927025	-
A07_LINE_90	Retrotransposons	LINE	LINE	114	15104475	15104588	-
A07_LINE_91	Retrotransposons	LINE	LINE	109	15284527	15284635	-
A07_LINE_92	Retrotransposons	LINE	LINE	107	16358609	16358715	+
A07_LINE_93	Retrotransposons	LINE	LINE	84	18755603	18755686	+
A07_LINE_94	Retrotransposons	LINE	LINE	85	24891250	24891334	-
A07_LINE_95	Retrotransposons	LINE	LINE	82	25082238	25082319	+
A07_LINE_96	Retrotransposons	LINE	LINE	106	27441642	27441747	+
A07_LINE_97	Retrotransposons	LINE	LINE	174	27730640	27730813	+
A07_LINE_98	Retrotransposons	LINE	LINE	83	27730911	27730993	+
A07_LINE_99	Retrotransposons	LINE	LINE	88	29643811	29643898	+
A07_LINE_100	Retrotransposons	LINE	LINE	96	31299341	31299436	-

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

174

Start:

19364215

End:

19364388

Strand:

+

>A06_LINE_81

GTTTTTTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGCTCTACCCGTGTTCGAGGTTTTGAGGGCAGCCTTGGGTGGTGGTGCTCGTGGCAACGACGATGAGGACTCTAGATCTTTAGATCTGTGGCAACAACACAAATGTCCAAGCTTTTAAGTTTGGAATCGGTGTTTC

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

88

Start:

19364486

End:

19364573

Strand:

+

>A06_LINE_82

TTACTCTGTTCTCTTTGTTTCCTCTGTAATTTCTGTCAAAAATTTTAAAATTGGTATAAAATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

364

Start:

24801965

End:

24802328

Strand:

+

>A06_LINE_83

GTTTGAAGTTGTCTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGCGTTACCCGCGTTTGAGGTTTTGAGGGCAGCCTTAAGTGGTGATGCTCGTGGCAACGACGATGAGGACTCAAGATCTTAGGATCTGTGGCAACAACACAAATGTCCGAGCTTTAGGGTTTGGAATCGGTGTTTCTACATGTTGGATCTTCTAGTTGCTTAGATGTGTTCTTGTTGATTGTGACCATTTTTTGGTTTCTGCGGTTACTTAGTCTTAGTTTTAGATTTTAATTACTCTGTTTTCTTTGTTTTCTCTGTGTAATCTCTGTCAAAAATTAAAATTGGTATAAAATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

102

Start:

25292433

End:

25292534

Strand:

+

>A06_LINE_84

GTGTTTAGTCTTTTATTTTTCTTTGATCTGCTTCTTGTAGTCTTTGTACTTCTGTCAAAAATTGAAAATTGGTAATAATATCTTTACATTTTTACCAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

102

Start:

30895609

End:

30895710

Strand:

+

>A06_LINE_85

GTTTTTAGTTTTTCAGTCTTATCCACTGTTGGTGGTTTATGTAACTTCTGTCAAAAACAAAAAAAATTGGTATAAAATTCAACTACACATTAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

120

Start:

5329539

End:

5329658

Strand:

+

>A07_LINE_86

ATGTGGTTTTTTGTTTTCGGTGTTGTGATAATCGTTTTTTATTTTATACTATTTGTTTCTACGTAATTTCTCTCAAACAAAAAATCGTATAAAATTTAACATTTTACTCCAGAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

114

Start:

11741733

End:

11741846

Strand:

-

>A07_LINE_87

TTTTTTTTTGGGTAAAAATGTTAAAGTATATTTACCATTTTCGAGTTTTTGACAGAACAACATAGAAACTAGGAATAGACATACTGAAAGTAAAGCTAAAAACAAAATAACAAC

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

11862889

End:

11862971

Strand:

+

>A07_LINE_88

TTCATCCGCTTCTTGTAATCTCTGTTCATCTGTCAAAAATTAAAATCTGGTAATAATACTTTAACATTTTTACCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

87

Start:

12926939

End:

12927025

Strand:

-

>A07_LINE_89

TTTTTTTTTTTTTGGTAAAAATGTTAAAGTTTTATTACCAGATTTTTCATTTTTGACAGAGTTTACAGAGATAACAAGAAACAGATT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

114

Start:

15104475

End:

15104588

Strand:

-

>A07_LINE_90

TTTTTTTTTTTGGGTAAAATGTTAAATATTATACCAATTTTAAATTTTTGACAGACTTTACAAAGAGAAACTAGTAGCGGAAAATAAACAAACAACAAACAACTACAGACAACA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

109

Start:

15284527

End:

15284635

Strand:

-

>A07_LINE_91

TTTTTTTTTTTAGGTAACAATGTTAAAGCTTTATTACCATTTTTAAATTTTAGACATAACTACAAAGAATACAAAGAACAGAAGATGCAAGAAATTAAGCTAAACAACA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

16358609

End:

16358715

Strand:

+

>A07_LINE_92

GTGTTTAGTTTTTTTTTTGATCTTTATCCGCTTCTAGTTTTCTTTGTAACTTCTGTCAAAAACAAAAATTTGGTATAAAATTTAACATTTACACCCAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

84

Start:

18755603

End:

18755686

Strand:

+

>A07_LINE_93

TCCGCTACTAGTTGTCTTTGTAAGTTCTGTCTCAAATTTGAAAATTGGTAATAATATTTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

24891250

End:

24891334

Strand:

-

>A07_LINE_94

TTTTTTTTTTTTTGGTAAAATGTTAAATATTATACCAAGTTTTCAAGTTTGTGACAGAAATTACAAAGAAACTAGTAGCGGATTA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

25082238

End:

25082319

Strand:

+

>A07_LINE_95

TCCGCTACTAGTTTCCTCTGTAATTTCTGTAAAAAATTGAAAACTTTGGTATAATAATTTAACATTTTACCAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

27441642

End:

27441747

Strand:

+

>A07_LINE_96

TGTTGTTTTAGTTTAATTTTCTGCGAATCTGCCTCTTGTGATCTCTTTAACTCTGGCTAAAATAAAAAATGGTAATAAATTTAACATTTTTACCAAAAGGAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

174

Start:

27730640

End:

27730813

Strand:

+

>A07_LINE_97

GTTTTTTCGTTTTTGTGTTAGTCTTCGGAGAAGCTGTAGGCTCTACCCGTGTTCGAGGTTTTGAGGGCAGCCTTGGGTGGTGGTGCTCGTGGCAACGACGATGAGGACTCTAGATCTTTAGATCTGTGGCAACAACACAAATGTCCAAGCTTTTAAGTTTGGAATCGGTGTTTC

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

27730911

End:

27730993

Strand:

+

>A07_LINE_98

TTACTCTGTTCTCTTTGTTTCCTCTGTAATTTCTGTCAAAAATTTTAAAATTGGTATAAAATTTAACATTTTACCAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

88

Start:

29643811

End:

29643898

Strand:

+

>A07_LINE_99

TTTGATCTGTTTCTTGTTGCCATTGTACTTCTGTCAAAAACATAAAATTGGTAATAATATCTTTACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

96

Start:

31299341

End:

31299436

Strand:

-

>A07_LINE_100

TTTTTTTTTTTTTGGTAAAATGTTAAAATATTATACCAATTTTTCGTTTTTGACAGACATTACAATAGAAGACTAGTAGCGGGTAAGTAAACAACA