TBGR-Browse-Bju-LINE.LINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
A02_LINE_21	Retrotransposons	LINE	LINE	127	12747828	12747954	+
A02_LINE_22	Retrotransposons	LINE	LINE	107	16201191	16201297	+
A02_LINE_23	Retrotransposons	LINE	LINE	341	18279280	18279620	-
A02_LINE_24	Retrotransposons	LINE	LINE	85	19404077	19404161	+
A02_LINE_25	Retrotransposons	LINE	LINE	107	24459083	24459189	+
A02_LINE_26	Retrotransposons	LINE	LINE	84	26239216	26239299	+
A02_LINE_27	Retrotransposons	LINE	LINE	91	28986400	28986490	-
A02_LINE_28	Retrotransposons	LINE	LINE	91	28998435	28998525	-
A02_LINE_29	Retrotransposons	LINE	LINE	106	29830335	29830440	-
A02_LINE_30	Retrotransposons	LINE	LINE	98	29854030	29854127	+
A02_LINE_31	Retrotransposons	LINE	LINE	106	29858959	29859064	-
A02_LINE_32	Retrotransposons	LINE	LINE	104	31703159	31703262	-
A02_LINE_33	Retrotransposons	LINE	LINE	104	31713775	31713878	+
A02_LINE_34	Retrotransposons	LINE	LINE	104	31718105	31718208	-
A02_LINE_35	Retrotransposons	LINE	LINE	117	32312754	32312870	-
A02_LINE_36	Retrotransposons	LINE	LINE	83	36695697	36695779	-
A03_LINE_37	Retrotransposons	LINE	LINE	113	7301674	7301786	+
A03_LINE_38	Retrotransposons	LINE	LINE	86	10092617	10092702	-
A03_LINE_39	Retrotransposons	LINE	LINE	82	27000780	27000861	-
A03_LINE_40	Retrotransposons	LINE	LINE	82	27036236	27036317	+

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_21

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

127

Start:

12747828

End:

12747954

Strand:

+

>A02_LINE_21

AGTTTGTTGAGTATAGCACTGGTGTTTAGATTACTTTTTAATGTCTCCGCTACTTGTATTCTCATGTAATCTCTGTTAAAAAACAGAAAATTTGGTATAATCAATTTAATATTTTACCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_22

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

16201191

End:

16201297

Strand:

+

>A02_LINE_22

TTGTTTAGCTTAATTTTCTGCAAATCTGTTTCTTGTTCATCTCTGTATTTCTGTAAAAAATTGAAAATCTGGTAATAATATTTAACATTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_23

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

341

Start:

18279280

End:

18279620

Strand:

-

>A02_LINE_23

TTTTTTTTTTGGTAAAATGTTAAATTTTATATCAATTTTAAATTTTTTGACAGAATACAGAGACAACAAAGAAAACAGAAAGACCCAAACTACAAAAAAAGCTGAGCTACAAAAGAAACATGTGAAATCAACAAGCAGTGAACACCACAAAGCAAATTAAGAGGATCATGGATGACGACACACCAATTCCGAGCATTGAACTTGGACATTTGCAAAGTTGCCGCAGATCTGAAGAACTGGAGTCCTCATTGTTGTTGCCACGAGCTCCTCCTTCCGAGGCCAGCCCTCAAACCTCGTAAGTGGGAAGAGCCTACAGCTTCTCCGAGGACTATGCAAAAACG

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_24

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

85

Start:

19404077

End:

19404161

Strand:

+

>A02_LINE_24

TTTTATCTGCTACTAGTACTCTATGTAACTGCTGTCAAAATTCTAAAACTTTGGTATAAAATTTAACATTTAGACCAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_25

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

107

Start:

24459083

End:

24459189

Strand:

+

>A02_LINE_25

TTGTGTTTAGTTTATTTTATGTAATTTCTGCTTCTAGTTTTCCCTGTAATTTCTGTCAAAACTTAAAAATCTTGGTATAAAATTTAACATTTTAGCAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_26

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

84

Start:

26239216

End:

26239299

Strand:

+

>A02_LINE_26

TTAATCTGCTACTAGTCTATCCTTGTAACTTATGTCAAAAAGAAAAACTTGGTATAAAATTTAACATTTAGACCAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_27

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

28986400

End:

28986490

Strand:

-

>A02_LINE_27

TTTTTTTTTTGGTAAAAATATAAAGATATTATTACCAAATTTTAAGTTTTTGACAGAAATTATAAAGGTTAACAAGAAACAGAGAAAAACA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_28

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

91

Start:

28998435

End:

28998525

Strand:

-

>A02_LINE_28

TTTTTTTTTTGGTAAAAATATAAAGATATTATTACCAAATTTTAAGTTTTTGACAGAAATTATAAAGGTTAACAAGAAACAGAGAAAAACA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_29

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

29830335

End:

29830440

Strand:

-

>A02_LINE_29

TTTTTTTTTTGGTAAAAATGTTAATATATTATTACCAATTTTCTTTTTTTTTGACAGAACTACAGAGAAAACAAGAATCGGAAAAAAACAAAAACAAAAAACTAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_30

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

98

Start:

29854030

End:

29854127

Strand:

+

>A02_LINE_30

TTTTTTGTTTTGTTTTCCGATTCTTGTTTTCTCTGTAATTCTGTCAAAAAAAGAAAATTGGTAATAATATCTTAACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_31

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

106

Start:

29858959

End:

29859064

Strand:

-

>A02_LINE_31

TTTTTTTTTTGGTAAAAATGTTAATATATTATTACCAATTTTCTTTTTTTTTGACAGAACTACAGAGAAAACAAGAATCGGAAAAAAACAAAAACAAAAAACTAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_32

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

31703159

End:

31703262

Strand:

-

>A02_LINE_32

TTTTTTTTTTTTGGTAAAATGTTAAAATTTTATATCAAAGTTTTAAATTTTTGACAGAGATTACAAAGATAACAAGTAGCGGGAAACTAAACTAAACTACACAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_33

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

31713775

End:

31713878

Strand:

+

>A02_LINE_33

TTGTGTAGTTTAGTTTAGTTTCCCGCTACTTGTTATCTTTGTAATCTCTGTCAAAAATTTAAAACTTTGATATAAAATTTTAACATTTTACCAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_34

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

104

Start:

31718105

End:

31718208

Strand:

-

>A02_LINE_34

TTTTTTTTTTTTGGTAAAATGTTAAAATTTTATATCAAAGTTTTAAATTTTTGACAGAGATTACAAAGATAACAAGTAGCGGGAAACTAAACTAAACTACACAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_35

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

117

Start:

32312754

End:

32312870

Strand:

-

>A02_LINE_35

TTTTTTTTTTTTTGGTAAAAATGTAAAGATATTATTACCAATTTTAAGATTTTTGACAGAAGTACAATGATAACGGGAAGCAGAGCAAAGAAAAAAAAAACTAAACAACACCTCAAA

Brassica juncea (Tumida_V1.5)

ID:

A02_LINE_36

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

83

Start:

36695697

End:

36695779

Strand:

-

>A02_LINE_36

TCTTTTTTTTTTTGGTAAAATGTTAAATTTATTATACCAAATTTTTAATTTTTTACAGAAGAACGAAGAAGACAAGTAGCGGA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_37

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

113

Start:

7301674

End:

7301786

Strand:

+

>A03_LINE_37

GTTGTGTTTAGTTTTTAATTTCGTTTACTCTGCTTCTTGTTATCCTTTGTAATTCTGTCAAAAACGTAAAATCTGGTAATAATATCTTTACATTTTTACCAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_38

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

86

Start:

10092617

End:

10092702

Strand:

-

>A03_LINE_38

TTTTTTTTTTTTTGGTAAAAATTTTAAAAATTATACCAGATTTTCAGTTTTTTACAGAAGTTACATAGATACACAAGAAGCAGATT

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_39

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

27000780

End:

27000861

Strand:

-

>A03_LINE_39

TTTTGTTTTTTTGGTAAAATGTTAAATTTATTATACCAAATTTTTAATTTTTTACAGAAGAACGAAGAAGACAAGTAGCGGA

Brassica juncea (Tumida_V1.5)

ID:

A03_LINE_40

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE

Length:

82

Start:

27036236

End:

27036317

Strand:

+

>A03_LINE_40

TCCGCTACTTGTCTTCTTCGTTCTTCTGTAAAAAATTAAAAATTTGGTATAATAAATTTAACATTTTACCAAAAAAACAAAA