ID Class Order Superfamily Length Start End Strand View
Aa.chr1_LTR-Cassandra_41 RetrotransposonsLTRLTR-Cassandra3571967307819673434+
Aa.chr1_LTR-Cassandra_42 RetrotransposonsLTRLTR-Cassandra1491968799119688139-
Aa.chr1_LTR-Cassandra_43 RetrotransposonsLTRLTR-Cassandra1701971112619711295+
Aa.chr1_LTR-Cassandra_44 RetrotransposonsLTRLTR-Cassandra1832100746121007643-
Aa.chr1_LTR-Cassandra_45 RetrotransposonsLTRLTR-Cassandra822100850721008588-
Aa.chr1_LTR-Cassandra_46 RetrotransposonsLTRLTR-Cassandra3322100858921008920-
Aa.chr1_LTR-Cassandra_47 RetrotransposonsLTRLTR-Cassandra3382232405822324395+
Aa.chr1_LTR-Cassandra_48 RetrotransposonsLTRLTR-Cassandra2432262945122629693-
Aa.chr1_LTR-Cassandra_49 RetrotransposonsLTRLTR-Cassandra3612289754722897907-
Aa.chr1_LTR-Cassandra_50 RetrotransposonsLTRLTR-Cassandra3542339981623400169-
Aa.chr1_LTR-Cassandra_51 RetrotransposonsLTRLTR-Cassandra3452340028023400624-
Aa.chr1_LTR-Cassandra_52 RetrotransposonsLTRLTR-Cassandra2042340065623400859-
Aa.chr1_LTR-Cassandra_53 RetrotransposonsLTRLTR-Cassandra3492522142625221774+
Aa.chr2_LTR-Cassandra_54 RetrotransposonsLTRLTR-Cassandra271196095196365-
Aa.chr2_LTR-Cassandra_55 RetrotransposonsLTRLTR-Cassandra355583125583479+
Aa.chr2_LTR-Cassandra_56 RetrotransposonsLTRLTR-Cassandra26912498581250126+
Aa.chr2_LTR-Cassandra_57 RetrotransposonsLTRLTR-Cassandra33113908161391146+
Aa.chr2_LTR-Cassandra_58 RetrotransposonsLTRLTR-Cassandra10013911471391246+
Aa.chr2_LTR-Cassandra_59 RetrotransposonsLTRLTR-Cassandra33314300541430386-
Aa.chr2_LTR-Cassandra_60 RetrotransposonsLTRLTR-Cassandra28716597911660077-

< 3 4 5 6 7 > Total 46


Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

357

Start:

19673078  

End:

19673434

Strand:

+

>Aa.chr1_LTR-Cassandra_41

AAGAATATGTGGTGCATGCGGAGAGGCTTAAAAGAATTGATTTGACTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCACTTGTTTTGAGAGAACTCCAGAGTTAAGCGTACTTGAGCTGGAGCAATCGAAGGATGGGTGACCTACTGGGAAGTCATTTCCAGTACCGGGCGAGTGAGGCCAAAACTCGGGAAAAGATCACGTGGTGATTGCAGGGTCAGTAAACATGCATTTCTAGCCTCCCGGACTAACGCACCTACCGCCAGAGAAGTCTCGGACCTGCGGGCCTAGAAGTTTCGGCTTGCGAGCCGAAAGTGGGCGTGGGGCCCACGGCAGGGCGGTCAGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

149

Start:

19687991  

End:

19688139

Strand:

-

>Aa.chr1_LTR-Cassandra_42

TATAACGCCCCGACCGTCCTGTCTGTGGGCCCTAAGCCCACTATCGGTCTGCGGGCCGAGACTTTTCTGACGATCGATGCGTTAATCCGAGAAGCTCGAAATGCATGTTTACTGACTTGCAATCACCACACGATCTTTCCCCGTGTTTT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

170

Start:

19711126  

End:

19711295

Strand:

+

>Aa.chr1_LTR-Cassandra_43

TGTAACACTCGATTCCTGACAATATGTGGTGCATTCAGAGATTTTAAAAAAATTGATTTGACTACCTATATCACCAAAGTGCACTTATCTTTTCAGTCATAGGTTCTAAAAGAACTCCAAAATGCGTGTTTGACCTCGAGCAATTTAAGGATATGTGACCTACTGAAAAG

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

183

Start:

21007461  

End:

21007643

Strand:

-

>Aa.chr1_LTR-Cassandra_44

TATAACGCCCCGACCGCCCTGCCGTGGGCCCTACGCCCACTTTCGGCTCGCAAGCCGAAACTTCTCCGACGGTCGGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTACTGACACTGCAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCCGGTACTGGAAATGACTTCCC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

82

Start:

21008507  

End:

21008588

Strand:

-

>Aa.chr1_LTR-Cassandra_45

CGCAACGTCCTCGTTGCATACCAAGACCGTTACCCTGACAGTGTCATACCCACACTCGTCAAGGTTCGTCTCTGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

21008589  

End:

21008920

Strand:

-

>Aa.chr1_LTR-Cassandra_46

TATAACGCCCCGACCGCCCTGCCGTGGGCCCTACGCCCACTTTCGGCTCGCAAGCCGAAACTTCTCCGACGGTCGGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCCGGTACTGGAAATGACTTCCCAGTAGGTCACCCATCCCTCGATTGCGCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGACAAGTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTCTCCGCATGCACCACATATTC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

22324058  

End:

22324395

Strand:

+

>Aa.chr1_LTR-Cassandra_47

TTTGAGAATATGTGGTGCATGCGGAAAGGCTTTAAAAGAATTGATTTAGCTACCTATGTCACCAAAGTCCACTTATCTTTTCGGTCATACATCATGGAAGAACTCCAGAGTTAAACGTGCTTGAGCTAGAGCAATTTCAAGATGGATGACTTACGGGGAAGTCATTTCCAGTACCGTGCGAGTGAGGCCAAAACTCGGAGAAAGATTGCGTGGTGATTGCAGGGTCAGTAAATATGCATTTCGAGCCTCCCGGACTAACGCACCGACCGTCAGAGAAGTTTCGGCTTACGAGCCGAGAATGGGCGTGGGGCCCACGGCAGAGCGGTCGGGGCATTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

243

Start:

22629451  

End:

22629693

Strand:

-

>Aa.chr1_LTR-Cassandra_48

GAGGCTCGAAAGATTTATTTACAGAATATGAAATCATGTTCTCGTGTTTTTTTCTTACTCACTCACACGGGTTGTGGAAATGACTCTCCATTTGATCATAAATTATAAAATTGCTCACGTTTAATCCTAAAGTTTTGTCACAATGAGCTATAAAAAAGCCAAGTACATTTTAGTAGCATAGTCAAATCATTTTTTTTAATCCTCATTGCATGCACCATATATTTCTAGAAATGAGGTCTTACA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

361

Start:

22897547  

End:

22897907

Strand:

-

>Aa.chr1_LTR-Cassandra_49

TATAACGCTCCGACCGCTCTGCCGTGGGTTCCACGTCCACTCTTGGCTCGTAAGCCGAAATTTCTCGGCCCGCAGGCCCGAGACTTTTCTGGCGTCGGTGCGTTAGTACGGGAAGCTCGAAATGCATGTTTACTAACCATGCAATCACCACGCGATCTTTCCCCAAGTTTTTGACCTCACTCGCACGATATTGGAAATGACTTCCCAGTAGGTCACCCATCTTTCGATTGTTCCAGCTTGAGCACGTTTAACTCTGAAGTTCTCTCAAAACAAGTGACCGAAAAGATAAATGCACTTTGATGACATAGGTAGCCAAATCAATTCTCTTAAGTATCTTCGCATGCACCATATATTTTTAGAA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

354

Start:

23399816  

End:

23400169

Strand:

-

>Aa.chr1_LTR-Cassandra_50

TGAAACGCCCCGACCTCCACCATTTGTGGCCTCCAAGTTCTCTCTCGGCCCGTCGAATCCACTTTTGTTTAAAAATCAATGCGTTATTTCATGAGGCTCAAAAGACTTATTTACTAATCCATTAAATCACCACTAGATCTTTCTCCATATTTTTTCCACACTCACACGGGGCTGGAAATGACTTCCAATAGGTCATTTATCATGTAATTGATCCTGCTGAAGCATGCTAAACTTTGGAGTCCTATCAGGATGAGTTACGAAAATGATAAGTGCACTTTATAATATAGGTAGCCAAATCAATACTATTAAGTCTATTTACATGCACCACTATTTTTTTTAAATCAGGGTGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

23400280  

End:

23400624

Strand:

-

>Aa.chr1_LTR-Cassandra_51

TATAACGCTCCAACTACCGTCGTATGTGGCCCCACATGCCCTCTCTCCGCTTGTGGGATCCACCTTCGTCCGACAACCGATGCACTATTTCGGGTGGCTCAACTAACTTGTTTACTGATCCTACAAATCACCACGAGATTTTTGAACGTGTTTTATCTTCACTCACACGATGCTGAAAATGACTTACCAGTAGATCACTCATCTTGAAATTGCTTCAATTTAGACATGCTTAACTTTGTAGTTCTATTAGGATGAGTTACTGAAAAGAAGTGTACATTGCTGATATAAATCAATTATCTAAAGCCTCTCTCCATGCACCATTATTTCTAAAATCAAGGTGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

204

Start:

23400656  

End:

23400859

Strand:

-

>Aa.chr1_LTR-Cassandra_52

TGTTTTATCTTCACTCATATGGTGCTGAAAATGACTTTCCAATAGGTCACCCATCTTGAAATTGTTTCAGATAATATACGCTTAACTCTTTAGTTCTATCAGAAGAGTTATTGAAAAGATAAGTGTACATTGGTAATATAAGTAGCCAAATCAATTTTGTTAAGTCTATGTGCATACACCAATATATCCAAAAATCAATGTGTT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

25221426  

End:

25221774

Strand:

+

>Aa.chr1_LTR-Cassandra_53

GTAACACCTTAATTTTTAAGAATATGTGGTGCATGCGGAGATGTTCAAAAGAATTGATTTGACTACTTATGTCACCAAAGTGCATTTATCATTTCGGTCACTTGTCTTGAGAGAACTTCAGAGTTAAGCGTGCTTGAGCAATCGAAGAATGGGTGATGTATTGGGAAATTATTTCCAGTACCGTGTGAGTGAGGCCAAAACACGGGGAAAGATCGCGTGGTGATTGCAGCCTGCAGAGTCAATAAACATGCATTTCGAATCTTCCGGACTAACGCACCAACCGTCAGATAAGTTTGGGCCCGTAGGCCGAGAGTGGGTGGCCCACAGGAAGGGCGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

271

Start:

196095  

End:

196365

Strand:

-

>Aa.chr2_LTR-Cassandra_54

TATAACGCCCCGACTGCCCTGCCGTGGGCCCTACGACCACTTTCGGCTTGCAAGCCAAAACTTCTCGGCCCGCAGGCCCGAGACTTCTTTGGCGCTCGGTGCGTTAGTCTGGGAGGCTAGAAATGCATGTTTACTGACCCTACAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCCGGTACTGGAAATGACTTCCCAATAGGTCACCCACCCCTTGATTGCTCCAGCTCAACCACGCTTAACTCTGGAGTTCTCTCAAGAC

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

583125  

End:

583479

Strand:

+

>Aa.chr2_LTR-Cassandra_55

GAATATGTGGTGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCACTTGTCTTGAGAGAACTCCAGAGTTAAGCGTGTTTGAGCTGGAGCAATCGAAAGATGGGTGACCTACTCGGAAGTCATTTCTAGTACCGGGCGAGTGAGGCCAAAACTCGGGAAAAGATCGCGTGGTGATTGCAGGGTCAGTAAACATGCATTTTTAGCCTCCCGGACTAACGCACCGACCGCCAGAGAAGTCTCAGACTTGCGGGCCGAGAAGTTTCGGCTTGCGAGCCGAAAGTGGGCGAGGGTCCCACGGCAGGGCGGTCGGGGAATTATA

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

269

Start:

1249858  

End:

1250126

Strand:

+

>Aa.chr2_LTR-Cassandra_56

TATAACACTCCGGATTCTGAAAATGTGTGGTGCATGCAGAGAGGCTTAAAAAAATTGATTTGGCTATCTATGTCACCAAAATGTACTTATCTTTTCATTTACTTGTCTTGAGAGAACTCTAGAGTTAAGCGTGCTTGAGCTGGAGCAATTGAAAGATGGGTGACCTACTGAGAAGTCATTTCCAGTACCGTGCGAGTGAGGCCAAAAACATATGAAAAGATCGTGTGGTGATTGCAGGTCAATAAACATGCATTTCGAGCCTTCTCGAC

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

1390816  

End:

1391146

Strand:

+

>Aa.chr2_LTR-Cassandra_57

TTTTGAGAATATGTGGTGCATGCGGAGAGGCTTAGAAGAATTGATTTGGCTACCTATGTCACCAAGGTGCAATTATCTTTTTAGTCACTGGTCTTGAAAGAACTTCAAAGTTAAGCGTGCTTGAGCTGGAGCAATTTCATGATGGGTGACCTACCGGGAAGTAATTTCCAGTACCATGTGAGTGAGGTCAGAACACGAAGAAAGATCACGTGGTGATTGCAGGGTCAGTAAATATGGATTTCGAGTCTCCCTGACTAACGCACCGACCGTCAGAGAAGTCTCGGCCGAGAGTGGGCTTGGGGCCCATAGGCAGGACGGTCGGGACGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

1391147  

End:

1391246

Strand:

+

>Aa.chr2_LTR-Cassandra_58

AGTGGTATCAGAGACAAACCTTGACAAGTGTGAGTATAAAACTGTCAGGGTGGCGATCTTGGTACGCAACGAGGACGTTGCGCGCTATGAGAGGGGGTGA

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

1430054  

End:

1430386

Strand:

-

>Aa.chr2_LTR-Cassandra_59

TATAACGCCCCAGCCGCCCTGCCTGTGGGCCCCAAGCCCACTCTCGGCCTGCAGGCTGAGACTTCTCTAACGGTCGGTGCGTTAGTCCGGGAGACTCGAAATACATGTTTATTGATCCTGCGATCACCACGCGAAATGTCTCCGTGTTTTGGCCTCACTCGCATGGTACTGGAAATGACTTCCTAATAGGTCACCCATCCTTCGATTGCTCCAGCTCAAGCAAGCTTAACTTTGGAGTTCTCTCAAGAGAAGTGACTAAAAAGATAAGTGCACTTTGGTGACATAGGTAGTCAAATCAATTCTTTTAAGCCTCTCTGCATGCACTACATATTC

Arabis alpina (v4.0)

ID:

Aa.chr2_LTR-Cassandra_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

287

Start:

1659791  

End:

1660077

Strand:

-

>Aa.chr2_LTR-Cassandra_60

TAACACCCAGACCGCCCTTTCTGTCAGCCCCACGCCCACTTTCAGCACGCGAGCCTAAGCTTGTCCGAAGACGATACGTTAATCCGAGAGGCTTGAAATGCATGTTAACCGACCCCGCATAAATCACCACGTGATCTTTCCCGTGTTTTGTCTTCACTCACGGTACTGGAAATGACTTTCCAGTAGGTCACCCATCCTTAAATTACTTCAGCTCAAGAACGCTTAACTTTGGAGTTCTCTCAGGATGTGTGACGAAAAAGATAAGTGCACTTTGGTGACATAGGTAG