ID Class Order Superfamily Length Start End Strand View
Aa.chr1_LTR-Cassandra_21 RetrotransposonsLTRLTR-Cassandra32698431849843509+
Aa.chr1_LTR-Cassandra_22 RetrotransposonsLTRLTR-Cassandra33199121379912467+
Aa.chr1_LTR-Cassandra_23 RetrotransposonsLTRLTR-Cassandra2011032123010321430+
Aa.chr1_LTR-Cassandra_24 RetrotransposonsLTRLTR-Cassandra1071032143110321537+
Aa.chr1_LTR-Cassandra_25 RetrotransposonsLTRLTR-Cassandra3321032158010321911+
Aa.chr1_LTR-Cassandra_26 RetrotransposonsLTRLTR-Cassandra2221051840810518629-
Aa.chr1_LTR-Cassandra_27 RetrotransposonsLTRLTR-Cassandra1001051880610518905-
Aa.chr1_LTR-Cassandra_28 RetrotransposonsLTRLTR-Cassandra3311051890610519236-
Aa.chr1_LTR-Cassandra_29 RetrotransposonsLTRLTR-Cassandra981089283410892931-
Aa.chr1_LTR-Cassandra_30 RetrotransposonsLTRLTR-Cassandra2251707080317071027-
Aa.chr1_LTR-Cassandra_31 RetrotransposonsLTRLTR-Cassandra3561726872317269078-
Aa.chr1_LTR-Cassandra_32 RetrotransposonsLTRLTR-Cassandra3321727051217270843-
Aa.chr1_LTR-Cassandra_33 RetrotransposonsLTRLTR-Cassandra1001727088617270985-
Aa.chr1_LTR-Cassandra_34 RetrotransposonsLTRLTR-Cassandra3101727098617271295-
Aa.chr1_LTR-Cassandra_35 RetrotransposonsLTRLTR-Cassandra3261727132717271652-
Aa.chr1_LTR-Cassandra_36 RetrotransposonsLTRLTR-Cassandra3021732907317329374+
Aa.chr1_LTR-Cassandra_37 RetrotransposonsLTRLTR-Cassandra2511876711718767367+
Aa.chr1_LTR-Cassandra_38 RetrotransposonsLTRLTR-Cassandra2901876780518768094+
Aa.chr1_LTR-Cassandra_39 RetrotransposonsLTRLTR-Cassandra1251967281219672936+
Aa.chr1_LTR-Cassandra_40 RetrotransposonsLTRLTR-Cassandra1001967293719673036+

< 2 3 4 5 6 > Total 46


Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

9843184  

End:

9843509

Strand:

+

>Aa.chr1_LTR-Cassandra_21

GAATATGTGGTGTATGCAGAGAGGCTTAAAATAATTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCAGTCACTTGTCTTGAGAGAACTCCAGAGTTAAACGTGCTTGAGCTGGAGCAATCGAATGATGGATGACCTATTGGAAAGTTATTTCCAGTACCGCGCAAGTGAGGCCAAAACATGAGAAAAGATCGTTTGGTAATTGTAGGGTTAGTAAACAAGTATTTCGAGCCTCCCATACTAAAGCACCGACTGTCAGAGCAGTCTCGGTCCGAGAGTGGGCTTGGAGTCAACAAACAGGGCGGTCAGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

9912137  

End:

9912467

Strand:

+

>Aa.chr1_LTR-Cassandra_22

GAATATGTGGTGCATGCGGAGAGACTTAGAAGAATTGATTTGGCTACCTATGTTACCAAAGTGCACTTATTTTTTCGGTTACACATCATGGGAGAACTCTAAAGTTAAGCGTGCTTGAGCTGGAGCAATTTTAAGATGAGTGACCTACTGGGAAGTAATTTCCAGTACCGTGCGAGTGAGATCAAAACACGGGGAAAGATCGTGTGGTGATTGCAGGATCAGTAAACATGCATTTCGAGCCTCCCGGACTAACGCACCGACCGTCAGGGAAGTTTCGGCTTGCGAGCCGAGAGTAGGTGTGGGCCCACGGCAGGGCGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

201

Start:

10321230  

End:

10321430

Strand:

+

>Aa.chr1_LTR-Cassandra_23

AGAGTGGGTGACCTACTAGAAAGTCATTTTCGGTATCGTGCGACTGAGGCCAAAATACGAGGAAAGATTGTGTGGTGATTGCAAGGTTAATAAACATGCATTTCAAGCTTTCCGGACTAATGCACCGACCGTCAGAAAAGTCTCAGCCTGCGAGCCGATGGTGGGCGTGGAGCCCAGTAGCAGGGGAGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

10321431  

End:

10321537

Strand:

+

>Aa.chr1_LTR-Cassandra_24

AGTGGTATCAGAGCCAAACTTTGACAAGTGTGGGTATAACACTGTCAGAGACTCAGGATAACGATCTTGGTACGCAACGAGGACGTTGCACGCTGTGAGAGGGGTGA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

10321580  

End:

10321911

Strand:

+

>Aa.chr1_LTR-Cassandra_25

GAATATGTGGTGCATGCGGAGAAGATTAAATGAATTGATTTGACTACCTATGTCACCAAATGACACATATCTTTTTAGTCACTTGTCTTGAGAAAACTCCATAGTTAAACGTGTTTGATGTGGAGCAATCGAAGGATGGGTGATCTACTAGGAAGTCATTTCAAGTACCGTGCGAGTGAGGCCAAAACACGGGGAAATATCACGTGGTGGTTGCAGGGTCAGTAAACATGCATTCGAGACTCCCGGACTAACGCATTGACCGTCAGAAGAGTCTCGGTCTGCGGGCCGAAGGTGGGTGTGGGGCCCACTGGCAGGGCGGTCGAGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

222

Start:

10518408  

End:

10518629

Strand:

-

>Aa.chr1_LTR-Cassandra_26

TATAACTCCCCGACCGCCCTGCCATGGGCCATACGCCCACTTTCGGCTCGCAAGCCGAAACTTCTCGGCCAGCAGACCCGAGACTTCTCTGGCGGTCGGTGCGTTAGTCCGGGAGGCTAGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCCGGTACTGGAAATGACTTCCCAGTAGGTCACCTATCC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

10518806  

End:

10518905

Strand:

-

>Aa.chr1_LTR-Cassandra_27

TCACCCCCTCTCACAGCGCGCAACATCCTCGTTGCGTACCAAGACCGTTACCCTGACAGTGTCATACCCACACTCGTCAAGGTTCGTCTCTGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

10518906  

End:

10519236

Strand:

-

>Aa.chr1_LTR-Cassandra_28

TATAACGCCTTATAACGCCCCGGCTCGCAAGCCGAAACTTTTCGGCCCGCAGGCCCGAGACTTCTCTGGCGGTCGGTGCGTTAGTCCGGGAGGCTAGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGTCCGGTACTGAAAATGACTTCCCAGTAGGTCACCCATCCCTCGATTGCTCCAGATCAAGCACGCTTAACTCTGGAGTTCTCTCAAGATAAGTGACCGGAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTCTCCGCATGCACCACATATT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

10892834  

End:

10892931

Strand:

-

>Aa.chr1_LTR-Cassandra_29

ACCCCCTCTCACAGCGCGCAACGTCCTCGTTGCGTACCAAGATCGTTACCCTGACAGTGCTATACCCACACTCGTCAAGGTTCGGCTCTGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

225

Start:

17070803  

End:

17071027

Strand:

-

>Aa.chr1_LTR-Cassandra_30

TATAACGCCCCGACCGCCATGCCGTGGGCCCCACGCCCACTCTCGGCTCGAAAGCCGAGATTCTCCGACGGTCGGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCCGGTACTGGAAATAACTTCTCAGTAGGTCACCCATCCTTCGATTGCTCCAGCTCAAGCACGCTT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

17268723  

End:

17269078

Strand:

-

>Aa.chr1_LTR-Cassandra_31

TATAACGCCCCGACCGCCTTGTCGTGGGCCCCACGCCCACTCTCAGCTCGCAAGCCGAAGCTTTTCGGCCCGCAAGCCCGAGACTTCTCTGGTGGTCGGTGCGTTAATCCGGGAGACTCGAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGTGTTTTGGCCTCACTCGCACGGTACTGAAAATGACTTCCCAGTAGATCACCCATCTTTCGATTGCTCCAACTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGACAAGTGACCGAAAAGATAAGTGCACTTTGGTGACATATGTAGCCAAATCAATTCTTTTACACCTCTCCGCATGCACCACATATTCTT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

17270512  

End:

17270843

Strand:

-

>Aa.chr1_LTR-Cassandra_32

TATAACGCCCCGACCGCCCTGCCGTGGGCCCCAAACCCACTCTCGGACCGCGGACTGAGACTTCTCTGACGGTCGGTGTGTTAGTTTGGGAGGCTCAAAATGCATGTTTACTGACCATGCAATCACCACGCAATCTTTCCCCGTGTTTTGGCCCCACTCACATGATACTGGAAATTACTTCCCGATAGGTCACCCATCATGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTAATGATGTGTGACCGAAAAGATAAGTGCATTTTGGTGACATAGGTAGCCAAATTAGTTCTTTTAAGCCTCTCCGCATGCATGACATATTC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

17270886  

End:

17270985

Strand:

-

>Aa.chr1_LTR-Cassandra_33

TCACCCCCTCTCACAGCGCGCAACGTCCTCGATGCATACCAAGATCGTCACCCTGACAGTGTTATACCCACACTTTTCAAGGTTCGGCTCTGATACCACT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

17270986  

End:

17271295

Strand:

-

>Aa.chr1_LTR-Cassandra_34

TATAACGTCTCGACTGCCTGCATGTGGGCCCTAAGCCCACTCTCGACCCGCAAGCCGAGAATTCTCTCACAGTCGGTACGTTAGTCCGGGAGGCTCGAAATGCATGTTTACTGACCCTACATTCACCACGCGATCTTTCCCTGTGTTTTGGCCTCACTCGCACGGTACTATAAATGACTTCCCAATAGGTCACTCATCCTTCGATTGCTCCAGCTCAAGCACGCTTTACTATGAAGTTTTCTCATGATGTGTGACCGAAAAAATAAGTGGATTTTAGTGACATAGATAGCCAAATCAATTCTTTTAAGCC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

326

Start:

17271327  

End:

17271652

Strand:

-

>Aa.chr1_LTR-Cassandra_35

TATAACGCCCAGACCGCCATGCCATGAGCCCCAAGCCCACTCTTGGCCCACTTCTCTGACGGTCGGTGCGTTAGTCCGGGAGGCTCGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCCCCGTGTTTTGGCATCTCACTCTCACGATACTGAAAATTACTTCCCAGCAGGTCACCTATTATGAAATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGATGTGTGACCGAAAAGATAAATGCATTTTGGTGACAAAGCTAGCCAAATTAATTCTTTTAAGCATCTCCGCATGCATAACATATTCTT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

302

Start:

17329073  

End:

17329374

Strand:

+

>Aa.chr1_LTR-Cassandra_36

AAGAATATGTGGTGCATGCGGAGAGGCTTAAAAGAATTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCACTTGTCTTGAGAGAACTCCAGAGTTAAGCGTGTTTGAGCTGGAGCAATCGAATGATAGGTGACCTACTGGGAAGGCATTTCCAGTACCGGGCGAGTGAGGCCAAAACTCGGGGAAAGATCGCGTGGTGATTGCAGGGTCAGTAAACATGCATTTCGAGTCTCCCGGACTAACGCACCGACCGTCGGAGAAGTCTCGGGCCGAGAGTGGGCGTGGGGCCC

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

251

Start:

18767117  

End:

18767367

Strand:

+

>Aa.chr1_LTR-Cassandra_37

TGTAACAATTTAATTTCAGAAAATATGTGGTTTATGGGAAGAAGTTTTAAAAGAATTAGTTTGGTTATTTTTATATCATAAAAGTGTATTTGTCGGTCACTGATCATGAAATAACTTTAGAGTTAAATGTATTTGAGCTGAAACAATTTTACGAAATGGATGATCTATTGGAAAAAAATTCAATACCATGTAAGTGATGACAAAAGAGGAGAAAAAAATTACATAATAATTTTTAGGATTAGTAACCAAGT

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

290

Start:

18767805  

End:

18768094

Strand:

+

>Aa.chr1_LTR-Cassandra_38

TGTAACAATTCAATTTCAAAAAATATGTGGTTTATGGGAAGAAGTTTTAAAAATTTAATTTGGCTATTTATATCATAAAAGTGTATTTGTATGTCACTGGTCATGAAATAACTTTAAAGTTAAACGTATTTAAGTTGAAGCAATTTTACGAAAGGATGATGTATTCAAAGAATTTCACTACCATGTAAGTGAGGACAAACAAGGGAAAAAAATCACATAATAATTTACGGGATTATTAACCAAGTATTTTGAGTTTCGTACAATAACGTACCAACCGTTAGACGAAAGTG

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

125

Start:

19672812  

End:

19672936

Strand:

+

>Aa.chr1_LTR-Cassandra_39

GTGATTGCAGGGTCAGTAAACATGCATTTCGAGTCTCCCGGACTAATGTACCGACCGTCGGAGAAATCTCGGCTTGCGAGCCGAGAGTGGGCGTGGGCCCACGGCAGGGCGGTCGGGGCGTTATA

Arabis alpina (v4.0)

ID:

Aa.chr1_LTR-Cassandra_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

100

Start:

19672937  

End:

19673036

Strand:

+

>Aa.chr1_LTR-Cassandra_40

AGTGGTATCAGAGCCGAACCTTGACGAGTGTCGGTATAGCACTGTCAGGGTAACGATCTTGGTACGCAACGAGGACGTTGCGCGCTGTGAGAGGGGGTGA