ID Class Order Superfamily Length Start End Strand View
scaff_73751_1_LTR-Cassandra_901 RetrotransposonsLTRLTR-Cassandra353419771+
scaff_74008_1_LTR-Cassandra_902 RetrotransposonsLTRLTR-Cassandra3101406314372-
scaff_74048_1_LTR-Cassandra_903 RetrotransposonsLTRLTR-Cassandra3754894749321-
scaff_74048_1_LTR-Cassandra_904 RetrotransposonsLTRLTR-Cassandra984932349420-
scaff_74048_1_LTR-Cassandra_905 RetrotransposonsLTRLTR-Cassandra3174942349739-
scaff_74235_1_LTR-Cassandra_906 RetrotransposonsLTRLTR-Cassandra31211211432-
scaff_74658_1_LTR-Cassandra_907 RetrotransposonsLTRLTR-Cassandra19429222+
scaff_74839_1_LTR-Cassandra_908 RetrotransposonsLTRLTR-Cassandra3324203742368-
scaff_74839_1_LTR-Cassandra_909 RetrotransposonsLTRLTR-Cassandra954241642510-
scaff_74839_1_LTR-Cassandra_910 RetrotransposonsLTRLTR-Cassandra3324251342844-
scaff_74894_1_LTR-Cassandra_911 RetrotransposonsLTRLTR-Cassandra285195479+
scaff_75031_1_LTR-Cassandra_912 RetrotransposonsLTRLTR-Cassandra9847144-
scaff_75078_1_LTR-Cassandra_913 RetrotransposonsLTRLTR-Cassandra261239499-

< 42 43 44 45 46 > Total 46


Arabis alpina (v4.0)

ID:

scaff_73751_1_LTR-Cassandra_901

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

353

Start:

419  

End:

771

Strand:

+

>scaff_73751_1_LTR-Cassandra_901

TGTAACACCCATATTCTGTAAATGGATGGTGCATGCATAGAGACTTAAAAGAATTGATTTGGCTAGCTATGTCACCAAAGTGCACTTATCTTTTCGGTTGCACATCATGAGAGAACTCAAGAGTTAAGAGTGCTTGAGTTGGAGCAATTTCATGATGGGTGACTGAATGGGAAGTAACTTCTAGTACCGAGCAAGGGAGGCCAAAACACAGGATAAGATCGCATGGAGATTGCAAGGGTCTATAAACTTGCATTTCGAGTCTCCAGGACTAACGCACCGACCATCTGAAAAGTTCTAGCCCTCGCGCCAAGAGTGGGATTGGAGTCCACATGCAGGGCGGTCATGGCGTTATA

Arabis alpina (v4.0)

ID:

scaff_74008_1_LTR-Cassandra_902

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

310

Start:

14063  

End:

14372

Strand:

-

>scaff_74008_1_LTR-Cassandra_902

TATAACGTCCCAACCGCCCTGCCTGTGGGCCCCAAGACCACTCTCGGCCCGCGGGCCGAGACTTCTCTGACCGTCGGTGTGTTAGTCTAGGAGACTCGAAATGTATGTTTATTGACCCTGCAGTTACCACACGATCTTCTCCGTATTTTGGCCTCACTCGCACGATACTGGAAATTACTTTCCAATAGGTCACCCGTCATGAAATTGCTCCAGCTCAGGATGTGTGACCGAAACGATAAGTGGATTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTCTCCGCATGCATCACTTATTCTAAAA

Arabis alpina (v4.0)

ID:

scaff_74048_1_LTR-Cassandra_903

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

375

Start:

48947  

End:

49321

Strand:

-

>scaff_74048_1_LTR-Cassandra_903

TATAACGCCCCGACCGCCCTTCATGTGGGTCCCACACCCACTCTCGGCCCGCGAGCCGAAACTTATGCGACGATCGGCGCGTTTGTCTAGGAGGCTCGAAATGCATGTTTACTGACCCTGCAATCACACGATCTTTCCTCGTGTTTTGCCCTCACTCGCATGGTAATGAAAATGACTCTCCAGTAGCTCACCAATCTTTTGATTGCTCCAACTCAAACATCTTTCGATTGCTCTAACTCAAGCACGCTTAACTCTAGAGTTTTCTCAAGATAAGTGACCGAAAGGATAAGTGCCTTTTGGTTACATAGGTAACCAAATCAATTCCTTTAAGCCTCTCCGCATGCACCACACATTTCCAAAATCCAAGGTATTACA

Arabis alpina (v4.0)

ID:

scaff_74048_1_LTR-Cassandra_904

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

49323  

End:

49420

Strand:

-

>scaff_74048_1_LTR-Cassandra_904

TCACCCCCACTCACAGAATGCAACGTCCTCGTTGCGTACCAAGATCGTCACCATGATAGTGTTATACGCACACTCATCAAGGTTCGTCTCTGAAACCA

Arabis alpina (v4.0)

ID:

scaff_74048_1_LTR-Cassandra_905

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

317

Start:

49423  

End:

49739

Strand:

-

>scaff_74048_1_LTR-Cassandra_905

TATAACGCCCCGACCACCCTTCATGTGGGCTCCACGCCCACTCTTGGCTTACGGACCAAAACTTATCTGACCTTCGACGCGTTAGTCCGGGAGTCTCAAAATGCATGTTTACTGACCCTACAATCATCATGCGATGTTTCCCCGTGTTTTGGCCTCACACATCCTTCGATTGCTCCAGCTCAAGCACGTTTAACTCTTGAGTTTTCTCAAGACAAGTTACCGAAACGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTCTCCGCATGCACCACGCAATTCCAGAATGTAGGGTGTTACA

Arabis alpina (v4.0)

ID:

scaff_74235_1_LTR-Cassandra_906

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

312

Start:

1121  

End:

1432

Strand:

-

>scaff_74235_1_LTR-Cassandra_906

TATAACGCCCCGACCGCCCTGCCGTGGGCCCCACGTCCACTTTCGGCTCGCAAGCCGAAACTTCTCGGCCCGCAGGCCCGAGACTTCTCTGGCGGTCGGTGCGTTAGTCCGGGAGAGTAGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTTCCCGAGTTTTGGCCTCACTCGCCCGGTACTAGAAATGACTTCCCAATAGGTCACCCATCATTCGATTGCTCCAGCTCAAGCACGCTTAACTTTGGAGTTCTCTCAAGACAAGTGACCGAACAGATATATGCACTTTGGTGACATAGGTAG

Arabis alpina (v4.0)

ID:

scaff_74658_1_LTR-Cassandra_907

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

194

Start:

29  

End:

222

Strand:

+

>scaff_74658_1_LTR-Cassandra_907

TGTAACACTCCATATTCTGTAAATGGAAGGTGCATGCATAGAGACTTAAAAGAATTGATTTGGCTAGCTATGTCACCAAAGTGCACTTATATTTTCGGTTGCACATAATGAGATAACTCAGAGTTAAACGTGCTTGAGCTGGAGCAATTTCATAATGGGTGACCGACTGGGAAGTAATTTCCAGTACCGAGCGA

Arabis alpina (v4.0)

ID:

scaff_74839_1_LTR-Cassandra_908

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

42037  

End:

42368

Strand:

-

>scaff_74839_1_LTR-Cassandra_908

TATAACGCCCTGACCGCCCTGCCGTGGGCCCCACACCCACTCTCGGCTAGCAAGCCGAGACTTCCCTGATGGTCGGTGCGTTAGTCCGGGAGACTCGAAATGCATGTTTACTGACCCTGCAATCACCACGCGATCTTTCACCGAGTTTTGGCCTCACTCGCCAGGTACTGGAAATAACTTCCCAGTAGGTCACCCATCCTTCGATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGACAAGTGACCGAAAAGATAAGTGCACTTTAGTGACATAGGTAGCCAAATCAATTCTTTTAAGCCTCTCCGCATGCACCACATATTC

Arabis alpina (v4.0)

ID:

scaff_74839_1_LTR-Cassandra_909

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

95

Start:

42416  

End:

42510

Strand:

-

>scaff_74839_1_LTR-Cassandra_909

CCCCCTCTCACAGCGCGCAACGTCCTCGTTGCGTACCAAGATCGTTACCCTGACAGTGTTATACCCACACTCGTCAATGTTCGTCTCTGATACCA

Arabis alpina (v4.0)

ID:

scaff_74839_1_LTR-Cassandra_910

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

42513  

End:

42844

Strand:

-

>scaff_74839_1_LTR-Cassandra_910

TATAACGCCCCGACCGCCCTGCCGTGGGCCCCACACCCACTCTTGTCTCGCAAGCCGATACTTCTCCGACGGTCGGTGCGTTAGTCCGGGAGACTCGAAATGCATAATTACTGACCCTACAATCACCACGCGATCTTTCCCCGAGTTTTGGCCTCACTCGCCAGGTACTGGAAATGACTTCCCAGTAGGTCACCCATCCTTCGATTGCTCCAGCTCAAGCACGCTTAACTCTGGAGTTCTCTCAAGACAAGTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAACCAATTCTTTTAAGCCTCTTTGCATGCACCACATATTC

Arabis alpina (v4.0)

ID:

scaff_74894_1_LTR-Cassandra_911

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

285

Start:

195  

End:

479

Strand:

+

>scaff_74894_1_LTR-Cassandra_911

TGTAACACGCCATATTCTGTAAATGGATGGTGCATGCATAGAGACTTAAAAGAATTGATTTGGTTAGCTATTTCACCAAAGTGCACTTATCTTTTCTATTGCACATCATGAAAGAACTCCAGAGTTAAGCGTGCTTGAGCTGGAGCAATTTGATGATGGGTGACCGACTGGGAAGTAATTTCCAGTACCGAGCGAATGAGGTCAAAACACAGGGAAAGATCGCGTGGTGATTACAGGGTCTGTAAACATGCATTTCTATTCTCCCGGACTAACGCAGCGACCGTC

Arabis alpina (v4.0)

ID:

scaff_75031_1_LTR-Cassandra_912

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

98

Start:

47  

End:

144

Strand:

-

>scaff_75031_1_LTR-Cassandra_912

TCACCCCCTCTCAGAGCGCAACGTCCACGTTACATACCAAGATCGTTACTCTTGTAGTGTTATACCCACACTAGTCAAGATTCATCTTTGCTATCACT

Arabis alpina (v4.0)

ID:

scaff_75078_1_LTR-Cassandra_913

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

239  

End:

499

Strand:

-

>scaff_75078_1_LTR-Cassandra_913

TATAACGTCCCGACCGCCCTGCATGTGGACCCCAAGCCCACTTTTCGGTCCACGGGCCGAGATTTTTCTGACGGTCGGTGTGTTAATCCGGGAGGCTCGAAATGCATGTTTACTGACCCTGCAATAACCACACGATCTTTTCCTGTGTTTTGGTCTCATTCGCACGGTATTGGAAATGACTTCCGAGTGGGTCACCCATCTTTCGATTGCTCTAACTCAAACACGCTGAACTATGAAGTTCTCTCAAGACAAATGACCGAA