ID Class Order Superfamily Length Start End Strand View
R1_LTR-Gypsy_61 RetrotransposonsLTRLTR-Gypsy1351021907510219209+
R1_LTR-Gypsy_62 RetrotransposonsLTRLTR-Gypsy7131022374610224458-
R1_LTR-Gypsy_63 RetrotransposonsLTRLTR-Gypsy4081022466610225073-
R1_LTR-Gypsy_64 RetrotransposonsLTRLTR-Gypsy4401022543610225875-
R1_LTR-Gypsy_65 RetrotransposonsLTRLTR-Gypsy821024765510247736-
R1_LTR-Gypsy_66 RetrotransposonsLTRLTR-Gypsy1321024899710249128-
R1_LTR-Gypsy_67 RetrotransposonsLTRLTR-Gypsy1411026301610263156+
R1_LTR-Gypsy_68 RetrotransposonsLTRLTR-Gypsy4951070663210707126-
R1_LTR-Gypsy_69 RetrotransposonsLTRLTR-Gypsy2061092708510927290+
R1_LTR-Gypsy_70 RetrotransposonsLTRLTR-Gypsy2081092843710928644+
R1_LTR-Gypsy_71 RetrotransposonsLTRLTR-Gypsy2831230524912305531-
R1_LTR-Gypsy_72 RetrotransposonsLTRLTR-Gypsy6691258215312582821+
R1_LTR-Gypsy_73 RetrotransposonsLTRLTR-Gypsy1491312828413128432-
R1_LTR-Gypsy_74 RetrotransposonsLTRLTR-Gypsy2961374876613749061-
R1_LTR-Gypsy_75 RetrotransposonsLTRLTR-Gypsy941375037413750467-
R1_LTR-Gypsy_76 RetrotransposonsLTRLTR-Gypsy7211375122113751941-
R1_LTR-Gypsy_77 RetrotransposonsLTRLTR-Gypsy1871375206913752255-
R1_LTR-Gypsy_78 RetrotransposonsLTRLTR-Gypsy6941375233413753027-
R1_LTR-Gypsy_79 RetrotransposonsLTRLTR-Gypsy7741375375913754532-
R1_LTR-Gypsy_80 RetrotransposonsLTRLTR-Gypsy2231375455613754778-

< 4 5 6 7 8 > Total 1242


Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

135

Start:

10219075  

End:

10219209

Strand:

+

>R1_LTR-Gypsy_61

CTACCACAGTCAAGCTAAATGACTTTAACCAAGCGCTGAGTGGGAGGCAACCCACTATTAGGTTTTCTTTTTTCTTTATTATATTTCATTTTCTTTTTGCTTTTATTTTTTTCGATTTTATTTTGCAGTTTTTAT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

713

Start:

10223746  

End:

10224458

Strand:

-

>R1_LTR-Gypsy_62

ACCGGTTTCAACTGTGATATGTGAAAAACCGGATGCACCTTCGAACCTTCTGGCAACTTCAACCTATACGCTACCTTCCCAACTCTCTCCAACACTTCAAATGGCCCACAGTAGCGAGTCGCTAGCTTTTGATATAATCTTCGACTAACTGATTGCTGGCGATAAGGTCGGAGTTTCAGATAAACTCTCATTCCAACAGACAACACCAAATCGCGACGGTGCTTGTTGGTGTTATTCTTCATCACTTCCTGAGCACATAACAGATGCTGCTTCATATCACACAACAGAGCATCCCTTTCTCTCATCATTGTCTCCAACTCAAAATTCTTTGTAGATCCCTCTTCAAAGCGCAACAATGGTGGAGGATCACGTCCATACACCATCTTAAACGGTGTGCATTGAGTCGCCATGTGATAGGATGTGTTATACCACAATTCAGCCCACATCAGAAACTTTCCACACGTTTTAGGATGAGATGATGCAAAACTCCTTAGATAGGTTTCCAAACATCGATTCAAAACTTCTGTTTGCCCATCTGATTGAGGGTGAAATGCTGTGCTAAAGCGCAAACGTGTTCCCGATGCCTTGAAACAGTCCTTCCAAAAATTGCTGAGAAAGATCTTGTCTCTATCCGATATGATTGACTTAGGAAACCCGTGAAGGCGAACTATCTCCTGCACAAAATTATGTGCCATGTCTGACGCTGTAAACGG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

408

Start:

10224666  

End:

10225073

Strand:

-

>R1_LTR-Gypsy_63

ACTTGCTTCCCTTGATACATGAATGTGTATTCATGCTTCTCCCAATCAATCTCGCACTTACCAAGGGTTCGCAACCAATACATTCCAAGAATCACATCGATGTTTCCTAACTCCAACACGATAAAGTCTGTGGTAAAAGACCAACCTTGCAGAGTTATCTGAACTTTTCTACACACTCCGACTCCTTGAACTGAAACTCCTGTTCCCAATAACACATCTAGCCCATTCATTCTATCAGTTTCCAACTTCAAATGCGATGCCATAGCTGGAGATATGAAGTTGTGAGTGGCACCACTATCCAACATTACCACCATCGTATGTTTCTTAATATTTCCTTTGAGTTTTGTTGTAGTTGGTGAATCCCTCCCATAGAAAGAGTTCAACGATATTGATCTCATTTCAGGCTCC

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

440

Start:

10225436  

End:

10225875

Strand:

-

>R1_LTR-Gypsy_64

AACCAAGCTATACAAAGAGCTATCTTCCATTTGATAAGCTGTAGCGATCATATCAGGAAGATCAGTCGGTTTACACATATTCACTACCTCACGCATCTCTTCTGTTAAACCGTTCATAAAGATTCCTTCTCTCTGAGTATCTGAGATTCATGTCACTTGAGTTGAAAGATCTTCGAACTTGTGAATGTATTCAGCTACTGATCCCGTCTGTTGAACCGCAAAGAACGGTTGACTCGGATCTCATAACTTTACTCTGCTAAATCTTGCGATCAATCTGGTCTTGAAATCAAACCAACACTCAAAAGGTCTCCTAATAATTTCACTGTTGAACCAGCTCAACACATCACCACTGAGACTTATCAAACCCAATTCAATCTTCGCCGTTTCGTCGTAACCTCCGATTCGGAAAAATCGTTCGGCTAGTGCGATCCAACCGTACG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

82

Start:

10247655  

End:

10247736

Strand:

-

>R1_LTR-Gypsy_65

TGATAGTGCTCAAATTACCCTAAAGAGCTTACTCTATCAAATAAGAGGTTCAACTGTAGTATTTAGGGATTGAATCACGAAG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

132

Start:

10248997  

End:

10249128

Strand:

-

>R1_LTR-Gypsy_66

CATGGTAGAAAATGGGTGAAATCCATGGTATATCAACTCCCCCAGACTTACTCCTTTGCTTGTCCTCAAACAAAAACTCAGTAGTCTTTGGAAAAGGTTTGAAAATAGTAGGGACTCAAAGATTCAAAATAT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

141

Start:

10263016  

End:

10263156

Strand:

+

>R1_LTR-Gypsy_67

AAGTTGATCTTTAGACATCTCCCACCCACAAGGTGTTCGATGATATGTCTGAGTCAACTCTCCTAAGCTCTTAACACACTTTACCAAAGACATTTGTTGTTAAGGGTGTTAAGATAGCCAATAGACTTGTTGTTAATGATT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

495

Start:

10706632  

End:

10707126

Strand:

-

>R1_LTR-Gypsy_68

ACCAGAGACCTCTTCTGAGAGCCTCGATGGCGACCTGGTCGTTGGGGTTTGAGAGCTTAGTTCCCACTGCTCTGAATTTTTCGATGTAGGCTCGTGGTGAGTCTCCCACTCCCTGTCTGATTTTCCAGAGGTCAGCCTCGGATGCTTGCTTTAGGATATGAGTCGAGTATTGCTTCATGAAAGCGTTGCTTAACTGGTCGAAGCTATCTATCGAATTTGGTTCGAGACCACAGAGAACCATTCGAGGGCTGTTCCGACTAGATTTTCGGCGAATGTCCTGCAGTAACCTGCTTCGCATTCTTCTTTCGTAAAGTGAGCTTTCACGATAGCTAGCCGGAAGGCTCTCAGGTAAGCCTTTGGGTCTGAGGTCCCGTCGTATTCGGGGATCCTAATTTTTCGTGTGTCTCTTATGTAAGAGTTGGCAATTCTGTCAGTGAATGGAGTTCCACAGGTCTCCTCGATCAAGCTCTCGATCTCGGGAGCTGAGCTCGTTGC

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

206

Start:

10927085  

End:

10927290

Strand:

+

>R1_LTR-Gypsy_69

TAAACTTGAAATGAAATAGCTTGTTAAAGCTTTATTGAGTGCAAGAAACTAAAGAGGAGAAGACTAGAGAGTTGTCACCAAAAGATAAAAAAGTAGGATTGATTCATAAAATGGGAAAGGAGGCTGCTCAAACTGCAGCCAAAGTTGCATTCATCAAGACACATTACAACATATATATGAATCTAGAAACTCTAGTTATATGAGTT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

208

Start:

10928437  

End:

10928644

Strand:

+

>R1_LTR-Gypsy_70

TAAACTTGAAATGAAATAGCTTGTTAAAGCTTTATTGAGTGCAAGAAACTAAAGAGGAGAAGACTAGAGAGTTGTCACCAAGAGATAAAAGAGTTTAGGATTGATTCATAAAATGGGAAAGGAGGCTGCTCAAACTGCAGCCAAAGTTGCATTCATCAAGACACATTACAACATATATATGAATCTAGAAACCCTAGTTACATGGGTT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

283

Start:

12305249  

End:

12305531

Strand:

-

>R1_LTR-Gypsy_71

GAAGTAGACTTGTGGCCTCGTTAAAAACCTTCCTTTGGAAAACCCAGTGGGACAAAACCAAAGGTTAGGAAAAGAGCACACACAAGCTACTTGCCTAGATGATGATCAACTTGAAGGTGGAGTAGCTTGAATGATGGTTAAGGTATCTTGGATGATCAAGCTTTGGCCAAGACCAATATAATCTTCTTGTTTCCAAGCATTCTTCAATGTTTCATCCTCAGATACAAGCTCTTCAGGTTCAGGTTCATGCTTCCATTCTTTGGTGCTTTCCATGATCATATCA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

669

Start:

12582153  

End:

12582821

Strand:

+

>R1_LTR-Gypsy_72

TGATATATTATAGGTTTACTTGTTTTTTAACATGATATAAATCACAATTTAGAGTATATTATATATATAAAAATATATTTGGAATCATTTTAGAGCTTTTTCAGGCTTATGTTCACTTTGGACGAATTTGGAGATTGTAGAGAAAATTGGAGTTTGAAGCAAAGTGACGCCGAAGAGATCATCTCGGTTTCAAACTATGAAGATGGTCGATCGCCACCAAGGCTGGTGTCGGTCGACACCCATGCTGTACGAGCAAGCTGACACATGTTTAATAAAGTTTCAATAAATTATAGAAAGACCCAAAAGTTTACGATATCTGTAAGAAGAGTTGTAAACATGTTTTACACTATATTAACTTATCTTAAGCCATTGTTTAGTCTCCACTTTATTTACTTTTAGAGAGTTTTTGAAGAGACAAGTCAGAACTCCTTCGGAAAGAATATTTCAAGCTCATTTAATTCTTTATTTGATTTATCTATGCAATTTATTTAGAATATGATTTGATTTTCGTTGATTATGTATGAGTAAAACACTGTTCGATTTATGGTTTTCTAGGGTTATGATGAATTTCTATATTGATAGAACTACTAGAGTTATTTTTATTCATTGTCTTGATTGTTCTTAATGCTAGATTTAGATTGATAACCTGAAATCTAGATCTTAGGGTAA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

149

Start:

13128284  

End:

13128432

Strand:

-

>R1_LTR-Gypsy_73

TGATGTAGCAGAAACTACGATAACACAATGAATCATATTTAGTCTGAGAATACCTAGGATCAAAATCTTCTTGATTCGTTAAGAACTCTCGAGTTATACTCGTAACAAAGAAATAAATGTTTCAAACTTCTCTTTATAAAAAATCAATA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

296

Start:

13748766  

End:

13749061

Strand:

-

>R1_LTR-Gypsy_74

AAAGCAATCATTAAGAACAAGTCTAATAGCTATCTTAGCATCTTTAACAACAAATGTCTTTGGCAAAGTACACTAAAAGCTTAGGAGAGTTGTCTCAGACATTTCATCAAACACCTTTTGGGTGGGAAAAGCCTAATGATCAACTTTTAAGTAGCTAACTCAAAAGATGCATTATGAATACTCTACTAGCAAGGAACAAGAATGATTTACACTAAAACATCCTAGAACTAGCCTAATCACCCTTAATCTCCCTAACCCATGAATTCAAAAGGTGATTACTCACTAATCTCCATGAT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

94

Start:

13750374  

End:

13750467

Strand:

-

>R1_LTR-Gypsy_75

TATCAACTTGCATTCTCAGTCCTTTACTTGTCCACAAGTAAACTTTCAAGAACCAAGGAGAAGAGGTTTGAAGAGTGGGGACTCATAATCAAAA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

721

Start:

13751221  

End:

13751941

Strand:

-

>R1_LTR-Gypsy_76

AATCTAGCAGGAATGAAGACTAAGCATTGTCGTTCCCAATACTCTCAACATTATGCACATGTAAAGCTTTCCAAAGAGGACTCACTCAACAAATAATGATGGTTTAAAAAGGAAGTATGGGTTTTGGGAGTGGAGTACCACTTGAGTTTGTCATGAAGATTGGTAAAAAGGATGGGACAACTCAATTGTGTATATCCATGACTGAGTACACAAGGGACCATATGCAAGAGACATTAAAACAGGATCTTGCTTCAAAGAGAGAGTATCAACAGTCAAATGAGTTTCAAGAGGAGCATTCAAGGCGCGAAGTTTACAAGCTTTCCAAAGGGTGCTCAAGCTACTTGTCATGATTACAAAGGTCAACAAATTCAGTACTTAACATGAGCTCTTTACAAGGTAGAAATCCCCCTAATGCATGAATGCAACATATATGCTTCTAGACTCAATCATAAAAATGCAAATGATGCAACTAAATGATTCTTTTTGTGTTTTTCAAATTTTTTTTTGGTTTTTCTATGCAAATAAGAATGTAAAATGTAATGTATGAGACTCAAAATCATCAAAGCAAACATGATCAAATACTTGGTACCTCCCCCACACTTGAATCACACAGTCTCTGTGTGAGTGAGAGATAGAAACCCAAAAGAAAACTAAAATGCAGAGAAAAACTGGTATATACAAGGGTAAGGTAGTGGAGTGGTACCTCAAATAGAGAGTGGAG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

187

Start:

13752069  

End:

13752255

Strand:

-

>R1_LTR-Gypsy_77

CCTTTACATCTGATCTTGTACTCAATAGCTCCATCCTTAAGCTTCATTGGGTGAAGAGTGAGAGTGTGTGGCAGTGTATCAAGAGGTGGAGGGTGAGGTTCTTTCATCATCTTCTTCTTGACATGAGTAGCCTTTGCAGCTCTACTCACCTCCTCCTTTTTAGCACTTTCCAAGTGCTCATCACACA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

694

Start:

13752334  

End:

13753027

Strand:

-

>R1_LTR-Gypsy_78

CTTCACAAGTGATTGTTCCACAATACACAGACTTCATCTCCAGGGGCTGGAGAGGATATGAGACAGCTTTGTTCACTTTGAGGAGTGTGACCTTCTTGTTATCAAAGTCTATGCAAGCTCCTACAGTTGTGAGAAATGGAGTGCCAAGGATGAGTGGGAACCTCTTTGCAGTTGCCATCTTTAGGACAGTGAGGTCAACAGGGATGGTGCATGCTCCAATCTTCATAGGAAAATCCTTGATGAGACCAATTGGGGTTGTAGAAGAAGAATCCCCAAACTGTAGTAAAGATCTGGTTGGCTCCATGCTCTCAATCCCTAGAGTCTTTACCATCTCTATAGAGATCACATTCACACTTGCACCAGAATCAACAAGAGCATCATCAAAAGTGAGCTTACCAAGGGAGCAAGACAAGGTAAACATCCCCTGGTGCTCTTGTTTAGAGAGAGACTTTGGTGGGACTTGTGGGTCAAGTTGCAGAGTAGAGAAGTTCAGAAGCTCTGCTACCTTATCTTTGTGAGTTAGAATGTCCTTGATGAGCATCATTTGTACACGAGCCTCTCGCATACCCGAGATCTCTGGAAGCTTTACCCCAACATCACTAAGATCTTTCCTGAACTTGGAGATGACCTTCTTCTGAGCTTTGGTGAGGACCCTCTGTGGAAATGGCAGTTTATCATAAAGTGACTGCTCAAC

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

774

Start:

13753759  

End:

13754532

Strand:

-

>R1_LTR-Gypsy_79

AGTGAACCTGCTCTTGAGTAGCTTTATTAGCAATGAGGATGTCAATCTTATCCTGTAGAGCTTTCAAATCCCTTCTTGTTTGCTTGTCATCTGTCCTATTGGCTCTGTCATGATCTCCACTGTAGACTGCATCACTCTTAACCATGTTGTCAACCAGCTGCGCTGCTTCTCTCTCAGTTATGTCCAAGAAGTTCCCATTGCTTGCAGTATCCAATCTGGCTCTGTACTCAGGGAGAGCACCTCTATAAAATGTACTGAGCAAACTTCCCTTGTTGAAACCATGGTGTGGACACTGAGCTAGGTAGCCATTGAACCTCTCCCATACTTCACTGAATCCTTCCAAGTTCTTCTGTTTGAAACCATATATCTTATTCCTGTAGTCAGCTGTCTTAGAAGTAGAGAAGAACTTTTCTAAGAAAGCATTCTTGCAGTCATCCCAAGTGGTGATGGAGCTGCTTAGCAGAGACTTCTCCCACTGACGTGCCTTGTCCCCCAAAGAGAAAGGGAAAAGCTTGAGCTTGAAAGCATCCTCTGATACACCATTGGTTTTGGATAGGCCACACTATCTATCAAAGCTGTCCAAGTGGTCGAATGGGTTCTCTGCAGCCAGGCCATGAAACTTGTTGTTCTCAATCTGGTTCAGCAATCCTGACTTGATCTCAAAGTTGTTTGTTGCCACAGCTGGTGTTTTGATTCCTAACAGTTGACCGTTGTTGGTCGGGCGGTCATAAGCACCAATAGGGCGAGCTGGTGGTTGTGGGTCAGCCATGTCAA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

223

Start:

13754556  

End:

13754778

Strand:

-

>R1_LTR-Gypsy_80

AGCTGCTCTTCTTATCTTCTCTTTCTAGCACACTCTCTCTCTAAAGCTCTGATGTCTTCTGCTCTTGGAACTGGGTTTGTTGGACCCTTGCTCCTCAAGTGCATACACCTGTAAATCAAAAGTAGGTGAAGAAAAAGAATCAGTAACCAGCGAAAATAAAAATGACTTAGTCTCAAACAAGCTCAATGTTTAAATCTACTCAGAAATTTGGCAACGGCGCCAA