Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_61Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
135Start:
10219075End:
10219209Strand:
+>R1_LTR-Gypsy_61
CTACCACAGTCAAGCTAAATGACTTTAACCAAGCGCTGAGTGGGAGGCAACCCACTATTAGGTTTTCTTTTTTCTTTATTATATTTCATTTTCTTTTTGCTTTTATTTTTTTCGATTTTATTTTGCAGTTTTTAT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_62Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
713Start:
10223746End:
10224458Strand:
->R1_LTR-Gypsy_62
ACCGGTTTCAACTGTGATATGTGAAAAACCGGATGCACCTTCGAACCTTCTGGCAACTTCAACCTATACGCTACCTTCCCAACTCTCTCCAACACTTCAAATGGCCCACAGTAGCGAGTCGCTAGCTTTTGATATAATCTTCGACTAACTGATTGCTGGCGATAAGGTCGGAGTTTCAGATAAACTCTCATTCCAACAGACAACACCAAATCGCGACGGTGCTTGTTGGTGTTATTCTTCATCACTTCCTGAGCACATAACAGATGCTGCTTCATATCACACAACAGAGCATCCCTTTCTCTCATCATTGTCTCCAACTCAAAATTCTTTGTAGATCCCTCTTCAAAGCGCAACAATGGTGGAGGATCACGTCCATACACCATCTTAAACGGTGTGCATTGAGTCGCCATGTGATAGGATGTGTTATACCACAATTCAGCCCACATCAGAAACTTTCCACACGTTTTAGGATGAGATGATGCAAAACTCCTTAGATAGGTTTCCAAACATCGATTCAAAACTTCTGTTTGCCCATCTGATTGAGGGTGAAATGCTGTGCTAAAGCGCAAACGTGTTCCCGATGCCTTGAAACAGTCCTTCCAAAAATTGCTGAGAAAGATCTTGTCTCTATCCGATATGATTGACTTAGGAAACCCGTGAAGGCGAACTATCTCCTGCACAAAATTATGTGCCATGTCTGACGCTGTAAACGG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_63Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
408Start:
10224666End:
10225073Strand:
->R1_LTR-Gypsy_63
ACTTGCTTCCCTTGATACATGAATGTGTATTCATGCTTCTCCCAATCAATCTCGCACTTACCAAGGGTTCGCAACCAATACATTCCAAGAATCACATCGATGTTTCCTAACTCCAACACGATAAAGTCTGTGGTAAAAGACCAACCTTGCAGAGTTATCTGAACTTTTCTACACACTCCGACTCCTTGAACTGAAACTCCTGTTCCCAATAACACATCTAGCCCATTCATTCTATCAGTTTCCAACTTCAAATGCGATGCCATAGCTGGAGATATGAAGTTGTGAGTGGCACCACTATCCAACATTACCACCATCGTATGTTTCTTAATATTTCCTTTGAGTTTTGTTGTAGTTGGTGAATCCCTCCCATAGAAAGAGTTCAACGATATTGATCTCATTTCAGGCTCC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_64Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
440Start:
10225436End:
10225875Strand:
->R1_LTR-Gypsy_64
AACCAAGCTATACAAAGAGCTATCTTCCATTTGATAAGCTGTAGCGATCATATCAGGAAGATCAGTCGGTTTACACATATTCACTACCTCACGCATCTCTTCTGTTAAACCGTTCATAAAGATTCCTTCTCTCTGAGTATCTGAGATTCATGTCACTTGAGTTGAAAGATCTTCGAACTTGTGAATGTATTCAGCTACTGATCCCGTCTGTTGAACCGCAAAGAACGGTTGACTCGGATCTCATAACTTTACTCTGCTAAATCTTGCGATCAATCTGGTCTTGAAATCAAACCAACACTCAAAAGGTCTCCTAATAATTTCACTGTTGAACCAGCTCAACACATCACCACTGAGACTTATCAAACCCAATTCAATCTTCGCCGTTTCGTCGTAACCTCCGATTCGGAAAAATCGTTCGGCTAGTGCGATCCAACCGTACG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_65Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
82Start:
10247655End:
10247736Strand:
->R1_LTR-Gypsy_65
TGATAGTGCTCAAATTACCCTAAAGAGCTTACTCTATCAAATAAGAGGTTCAACTGTAGTATTTAGGGATTGAATCACGAAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_66Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
132Start:
10248997End:
10249128Strand:
->R1_LTR-Gypsy_66
CATGGTAGAAAATGGGTGAAATCCATGGTATATCAACTCCCCCAGACTTACTCCTTTGCTTGTCCTCAAACAAAAACTCAGTAGTCTTTGGAAAAGGTTTGAAAATAGTAGGGACTCAAAGATTCAAAATAT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_67Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
141Start:
10263016End:
10263156Strand:
+>R1_LTR-Gypsy_67
AAGTTGATCTTTAGACATCTCCCACCCACAAGGTGTTCGATGATATGTCTGAGTCAACTCTCCTAAGCTCTTAACACACTTTACCAAAGACATTTGTTGTTAAGGGTGTTAAGATAGCCAATAGACTTGTTGTTAATGATT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_68Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
495Start:
10706632End:
10707126Strand:
->R1_LTR-Gypsy_68
ACCAGAGACCTCTTCTGAGAGCCTCGATGGCGACCTGGTCGTTGGGGTTTGAGAGCTTAGTTCCCACTGCTCTGAATTTTTCGATGTAGGCTCGTGGTGAGTCTCCCACTCCCTGTCTGATTTTCCAGAGGTCAGCCTCGGATGCTTGCTTTAGGATATGAGTCGAGTATTGCTTCATGAAAGCGTTGCTTAACTGGTCGAAGCTATCTATCGAATTTGGTTCGAGACCACAGAGAACCATTCGAGGGCTGTTCCGACTAGATTTTCGGCGAATGTCCTGCAGTAACCTGCTTCGCATTCTTCTTTCGTAAAGTGAGCTTTCACGATAGCTAGCCGGAAGGCTCTCAGGTAAGCCTTTGGGTCTGAGGTCCCGTCGTATTCGGGGATCCTAATTTTTCGTGTGTCTCTTATGTAAGAGTTGGCAATTCTGTCAGTGAATGGAGTTCCACAGGTCTCCTCGATCAAGCTCTCGATCTCGGGAGCTGAGCTCGTTGC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_69Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
206Start:
10927085End:
10927290Strand:
+>R1_LTR-Gypsy_69
TAAACTTGAAATGAAATAGCTTGTTAAAGCTTTATTGAGTGCAAGAAACTAAAGAGGAGAAGACTAGAGAGTTGTCACCAAAAGATAAAAAAGTAGGATTGATTCATAAAATGGGAAAGGAGGCTGCTCAAACTGCAGCCAAAGTTGCATTCATCAAGACACATTACAACATATATATGAATCTAGAAACTCTAGTTATATGAGTT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_70Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
208Start:
10928437End:
10928644Strand:
+>R1_LTR-Gypsy_70
TAAACTTGAAATGAAATAGCTTGTTAAAGCTTTATTGAGTGCAAGAAACTAAAGAGGAGAAGACTAGAGAGTTGTCACCAAGAGATAAAAGAGTTTAGGATTGATTCATAAAATGGGAAAGGAGGCTGCTCAAACTGCAGCCAAAGTTGCATTCATCAAGACACATTACAACATATATATGAATCTAGAAACCCTAGTTACATGGGTT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_71Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
283Start:
12305249End:
12305531Strand:
->R1_LTR-Gypsy_71
GAAGTAGACTTGTGGCCTCGTTAAAAACCTTCCTTTGGAAAACCCAGTGGGACAAAACCAAAGGTTAGGAAAAGAGCACACACAAGCTACTTGCCTAGATGATGATCAACTTGAAGGTGGAGTAGCTTGAATGATGGTTAAGGTATCTTGGATGATCAAGCTTTGGCCAAGACCAATATAATCTTCTTGTTTCCAAGCATTCTTCAATGTTTCATCCTCAGATACAAGCTCTTCAGGTTCAGGTTCATGCTTCCATTCTTTGGTGCTTTCCATGATCATATCA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_72Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
669Start:
12582153End:
12582821Strand:
+>R1_LTR-Gypsy_72
TGATATATTATAGGTTTACTTGTTTTTTAACATGATATAAATCACAATTTAGAGTATATTATATATATAAAAATATATTTGGAATCATTTTAGAGCTTTTTCAGGCTTATGTTCACTTTGGACGAATTTGGAGATTGTAGAGAAAATTGGAGTTTGAAGCAAAGTGACGCCGAAGAGATCATCTCGGTTTCAAACTATGAAGATGGTCGATCGCCACCAAGGCTGGTGTCGGTCGACACCCATGCTGTACGAGCAAGCTGACACATGTTTAATAAAGTTTCAATAAATTATAGAAAGACCCAAAAGTTTACGATATCTGTAAGAAGAGTTGTAAACATGTTTTACACTATATTAACTTATCTTAAGCCATTGTTTAGTCTCCACTTTATTTACTTTTAGAGAGTTTTTGAAGAGACAAGTCAGAACTCCTTCGGAAAGAATATTTCAAGCTCATTTAATTCTTTATTTGATTTATCTATGCAATTTATTTAGAATATGATTTGATTTTCGTTGATTATGTATGAGTAAAACACTGTTCGATTTATGGTTTTCTAGGGTTATGATGAATTTCTATATTGATAGAACTACTAGAGTTATTTTTATTCATTGTCTTGATTGTTCTTAATGCTAGATTTAGATTGATAACCTGAAATCTAGATCTTAGGGTAA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_73Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
149Start:
13128284End:
13128432Strand:
->R1_LTR-Gypsy_73
TGATGTAGCAGAAACTACGATAACACAATGAATCATATTTAGTCTGAGAATACCTAGGATCAAAATCTTCTTGATTCGTTAAGAACTCTCGAGTTATACTCGTAACAAAGAAATAAATGTTTCAAACTTCTCTTTATAAAAAATCAATA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_74Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
296Start:
13748766End:
13749061Strand:
->R1_LTR-Gypsy_74
AAAGCAATCATTAAGAACAAGTCTAATAGCTATCTTAGCATCTTTAACAACAAATGTCTTTGGCAAAGTACACTAAAAGCTTAGGAGAGTTGTCTCAGACATTTCATCAAACACCTTTTGGGTGGGAAAAGCCTAATGATCAACTTTTAAGTAGCTAACTCAAAAGATGCATTATGAATACTCTACTAGCAAGGAACAAGAATGATTTACACTAAAACATCCTAGAACTAGCCTAATCACCCTTAATCTCCCTAACCCATGAATTCAAAAGGTGATTACTCACTAATCTCCATGAT
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_75Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
94Start:
13750374End:
13750467Strand:
->R1_LTR-Gypsy_75
TATCAACTTGCATTCTCAGTCCTTTACTTGTCCACAAGTAAACTTTCAAGAACCAAGGAGAAGAGGTTTGAAGAGTGGGGACTCATAATCAAAA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_76Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
721Start:
13751221End:
13751941Strand:
->R1_LTR-Gypsy_76
AATCTAGCAGGAATGAAGACTAAGCATTGTCGTTCCCAATACTCTCAACATTATGCACATGTAAAGCTTTCCAAAGAGGACTCACTCAACAAATAATGATGGTTTAAAAAGGAAGTATGGGTTTTGGGAGTGGAGTACCACTTGAGTTTGTCATGAAGATTGGTAAAAAGGATGGGACAACTCAATTGTGTATATCCATGACTGAGTACACAAGGGACCATATGCAAGAGACATTAAAACAGGATCTTGCTTCAAAGAGAGAGTATCAACAGTCAAATGAGTTTCAAGAGGAGCATTCAAGGCGCGAAGTTTACAAGCTTTCCAAAGGGTGCTCAAGCTACTTGTCATGATTACAAAGGTCAACAAATTCAGTACTTAACATGAGCTCTTTACAAGGTAGAAATCCCCCTAATGCATGAATGCAACATATATGCTTCTAGACTCAATCATAAAAATGCAAATGATGCAACTAAATGATTCTTTTTGTGTTTTTCAAATTTTTTTTTGGTTTTTCTATGCAAATAAGAATGTAAAATGTAATGTATGAGACTCAAAATCATCAAAGCAAACATGATCAAATACTTGGTACCTCCCCCACACTTGAATCACACAGTCTCTGTGTGAGTGAGAGATAGAAACCCAAAAGAAAACTAAAATGCAGAGAAAAACTGGTATATACAAGGGTAAGGTAGTGGAGTGGTACCTCAAATAGAGAGTGGAG
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_77Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
187Start:
13752069End:
13752255Strand:
->R1_LTR-Gypsy_77
CCTTTACATCTGATCTTGTACTCAATAGCTCCATCCTTAAGCTTCATTGGGTGAAGAGTGAGAGTGTGTGGCAGTGTATCAAGAGGTGGAGGGTGAGGTTCTTTCATCATCTTCTTCTTGACATGAGTAGCCTTTGCAGCTCTACTCACCTCCTCCTTTTTAGCACTTTCCAAGTGCTCATCACACA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_78Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
694Start:
13752334End:
13753027Strand:
->R1_LTR-Gypsy_78
CTTCACAAGTGATTGTTCCACAATACACAGACTTCATCTCCAGGGGCTGGAGAGGATATGAGACAGCTTTGTTCACTTTGAGGAGTGTGACCTTCTTGTTATCAAAGTCTATGCAAGCTCCTACAGTTGTGAGAAATGGAGTGCCAAGGATGAGTGGGAACCTCTTTGCAGTTGCCATCTTTAGGACAGTGAGGTCAACAGGGATGGTGCATGCTCCAATCTTCATAGGAAAATCCTTGATGAGACCAATTGGGGTTGTAGAAGAAGAATCCCCAAACTGTAGTAAAGATCTGGTTGGCTCCATGCTCTCAATCCCTAGAGTCTTTACCATCTCTATAGAGATCACATTCACACTTGCACCAGAATCAACAAGAGCATCATCAAAAGTGAGCTTACCAAGGGAGCAAGACAAGGTAAACATCCCCTGGTGCTCTTGTTTAGAGAGAGACTTTGGTGGGACTTGTGGGTCAAGTTGCAGAGTAGAGAAGTTCAGAAGCTCTGCTACCTTATCTTTGTGAGTTAGAATGTCCTTGATGAGCATCATTTGTACACGAGCCTCTCGCATACCCGAGATCTCTGGAAGCTTTACCCCAACATCACTAAGATCTTTCCTGAACTTGGAGATGACCTTCTTCTGAGCTTTGGTGAGGACCCTCTGTGGAAATGGCAGTTTATCATAAAGTGACTGCTCAAC
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_79Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
774Start:
13753759End:
13754532Strand:
->R1_LTR-Gypsy_79
AGTGAACCTGCTCTTGAGTAGCTTTATTAGCAATGAGGATGTCAATCTTATCCTGTAGAGCTTTCAAATCCCTTCTTGTTTGCTTGTCATCTGTCCTATTGGCTCTGTCATGATCTCCACTGTAGACTGCATCACTCTTAACCATGTTGTCAACCAGCTGCGCTGCTTCTCTCTCAGTTATGTCCAAGAAGTTCCCATTGCTTGCAGTATCCAATCTGGCTCTGTACTCAGGGAGAGCACCTCTATAAAATGTACTGAGCAAACTTCCCTTGTTGAAACCATGGTGTGGACACTGAGCTAGGTAGCCATTGAACCTCTCCCATACTTCACTGAATCCTTCCAAGTTCTTCTGTTTGAAACCATATATCTTATTCCTGTAGTCAGCTGTCTTAGAAGTAGAGAAGAACTTTTCTAAGAAAGCATTCTTGCAGTCATCCCAAGTGGTGATGGAGCTGCTTAGCAGAGACTTCTCCCACTGACGTGCCTTGTCCCCCAAAGAGAAAGGGAAAAGCTTGAGCTTGAAAGCATCCTCTGATACACCATTGGTTTTGGATAGGCCACACTATCTATCAAAGCTGTCCAAGTGGTCGAATGGGTTCTCTGCAGCCAGGCCATGAAACTTGTTGTTCTCAATCTGGTTCAGCAATCCTGACTTGATCTCAAAGTTGTTTGTTGCCACAGCTGGTGTTTTGATTCCTAACAGTTGACCGTTGTTGGTCGGGCGGTCATAAGCACCAATAGGGCGAGCTGGTGGTTGTGGGTCAGCCATGTCAA
Raphanus sativus (v1.0)
ID:
R1_LTR-Gypsy_80Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
223Start:
13754556End:
13754778Strand:
->R1_LTR-Gypsy_80
AGCTGCTCTTCTTATCTTCTCTTTCTAGCACACTCTCTCTCTAAAGCTCTGATGTCTTCTGCTCTTGGAACTGGGTTTGTTGGACCCTTGCTCCTCAAGTGCATACACCTGTAAATCAAAAGTAGGTGAAGAAAAAGAATCAGTAACCAGCGAAAATAAAAATGACTTAGTCTCAAACAAGCTCAATGTTTAAATCTACTCAGAAATTTGGCAACGGCGCCAA