ID Class Order Superfamily Length Start End Strand View
R1_LTR-Gypsy_41 RetrotransposonsLTRLTR-Gypsy5541003342310033976-
R1_LTR-Gypsy_42 RetrotransposonsLTRLTR-Gypsy6551003441810035072-
R1_LTR-Gypsy_43 RetrotransposonsLTRLTR-Gypsy9181003959210040509-
R1_LTR-Gypsy_44 RetrotransposonsLTRLTR-Gypsy3071004305810043364-
R1_LTR-Gypsy_45 RetrotransposonsLTRLTR-Gypsy10481004376110044808-
R1_LTR-Gypsy_46 RetrotransposonsLTRLTR-Gypsy4571004758910048045-
R1_LTR-Gypsy_47 RetrotransposonsLTRLTR-Gypsy6191004910510049723-
R1_LTR-Gypsy_48 RetrotransposonsLTRLTR-Gypsy1411006385510063995-
R1_LTR-Gypsy_49 RetrotransposonsLTRLTR-Gypsy1441007329510073438-
R1_LTR-Gypsy_50 RetrotransposonsLTRLTR-Gypsy7091007414510074853-
R1_LTR-Gypsy_51 RetrotransposonsLTRLTR-Gypsy1541008331610083469+
R1_LTR-Gypsy_52 RetrotransposonsLTRLTR-Gypsy2021008353210083733+
R1_LTR-Gypsy_53 RetrotransposonsLTRLTR-Gypsy1351008588710086021-
R1_LTR-Gypsy_54 RetrotransposonsLTRLTR-Gypsy12601011553310116792-
R1_LTR-Gypsy_55 RetrotransposonsLTRLTR-Gypsy3761011680610117181-
R1_LTR-Gypsy_56 RetrotransposonsLTRLTR-Gypsy4561011718310117638-
R1_LTR-Gypsy_57 RetrotransposonsLTRLTR-Gypsy5471016169310162239+
R1_LTR-Gypsy_58 RetrotransposonsLTRLTR-Gypsy18331016240910164241+
R1_LTR-Gypsy_59 RetrotransposonsLTRLTR-Gypsy8841018067810181561+
R1_LTR-Gypsy_60 RetrotransposonsLTRLTR-Gypsy861021141210211497-

< 3 4 5 6 7 > Total 1242


Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

554

Start:

10033423  

End:

10033976

Strand:

-

>R1_LTR-Gypsy_41

CGCAATTTATGTTCGGCCAGGAAGCAGAGTCACGACTGTTTTTGGCTTCCCCAGATTACCGCTGTTCCAGTCGGTGTTGGAAACTTGACGCTAAGATGGTAAGTGGACGGGACTGCCTTCATGGCGTTTATCCAAGGAGTTCCCATTATGGTGTTATAGATAGCCGGGTTATCCACTACCGCGAATTCGACGATCTTCGTGACTTCCTTAGCCATGACCGGGAGTCTGATTTTTCCGAGGGTCATGGACGTGACTCCCGAGAACCCAGTCAACGGTCTCGGTTCTGGGATGACTTCTCTGAGGGGTATGTTCATCCTCTGCAGAGTGTCGCGGAACATGATGTTGACCGTGTTTCCTGGGTCGATGAGGATGCGGCCGACTTCGAGATCCTAAATCACCAAGTCGATGACCAGAGGATCGTAGTGGGGTTTATCGAGTCCGGCCGTATCCTGTTCCTCGAAGACGATTGCGTGATCGGGAACGTCGTCCTCTGGACACCATCCGGGGCTTGTTTCGGCCCTCCGTCCGTAGGCTTTGATCGACGAAACGGAGTC

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

655

Start:

10034418  

End:

10035072

Strand:

-

>R1_LTR-Gypsy_42

CGGTCCATGCTTTTGCGCTAGGACTTTCATCTCTTCTTCCATGATGATGAAATCCGTCGCCTTGTGGAGAGTGTCCTGGATGGTGCGTGGCCTCTCCAAAGAAATCCACTTTCGGAATTTCGATTTGTACCAGAGGTTTTTTCTCAGGGCGTCGATGGCGACTCTGTCGCTGAGGCCTGTTACCCTGGACATCACGAGTTTGAACCTCCTTATGTAGTCGCGGAGCGGTTCATCTTCCTTTTGAATTAGACTCCAAAGGTCTACGTCGGAAGTTTCCCTGTCCATGAACATGGAGAATTGCTTCAGAAAAGCTGAAGCAAGCTGGCGGAAACTTCCGATGGAGTTTCTTTTCAAGTGTGAGAACCACTCGAGCGCAGCACCTCTGAGGTTCTCGACGAATAGGAGACAGCAGCCGACGTCCTTTTCCCGCTCCGGAAGTTTAGACCTCGCCATCGCAATCTGGAAGGACTGCAGATGTGCCTTCGGATCTGTGGTTCCGTCGTAGGTGGGAAGCTTTATTTTCCCGGGATCTGAGACTCGTGCGTCCGTGATTCGAGAGGTGAACGGAGTCTTTCTCGATTCCTCGAGGAGCAGGTCGATCTCGGGGGCAGTGCTGGTTGCGTGGTGAATCTGCGATTTTACCGCTTTCACCTCG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

918

Start:

10039592  

End:

10040509

Strand:

-

>R1_LTR-Gypsy_43

GCTAATTTTTCCATTGTAGGGTACCTAGTTTCGGCGTCTATCAGACTCTTGCTAGTGTAATAGACAGGTCTCTGTTCGTTTTGTTTCTCTCGTACCAGCACGCCGCTAACTGCAGCAATTGATACGGCGAGGTACATATACAGTGGCTCTCCTACTACAAGTTTGGACAGGATCGGAGGTTCGGAGAGGTAAGCTTTCAATTGCTTGAAGGCTTCCTCACATTTCTCATCCCATAAGAACTTCTTATTATTTTTAGAAGTTTATAGAATAGGAGGCACTTATCGGTTGACCTGGATATGAATCGATTTAACGCTGCGATTCGTCCAGTCAATCTTTGTACCTCTCTGGTTGTCTTAGGTGACGGAATTTCCAGGAATGTTGCTATCTGATGCGGGTTGGCTTCAATACCTCTGTCAGTTACAAGGTAGCCTAGGAACTCGCCTGAGGGTACCCCGAAGGTACATTTAGTGGGATTGAGCTTCATATCGTACTTGTTAAGGATATCGAAGCATTCCCTTAAGTGGAAGATATGGTCTTCTCCAGCTGAGGATTTGACTAGCATATCATCAATATAGACCTCCATGGTTTTTCCGAGTTGTCCAGCAAACATCTTATTTACTAGCCTCTGATAGGTAGCTCCTGTGTTCTTTAACCCGAATGGCATAACCTTGTAACAATAGGTTCCTCGTTCGGTTATGAATGCAGTTTTTTCTTGATCCTCAGGATCTATCCTCATTTGGTTGTATCCTGAGAAGGCATCCATGAAGGATAGGAGTCGATGGCCAGCTGTTGCTTCAACCAGGCGGTCGATGTGAGGTAACGGGAAGCTGTCTTTAGGACAAGCCTTGATTAGGTCGGTGAAGTCTACACAGATTCTCCGTTTCCCGTTTTTCTTTTTTACTAAACTACCGGGTTAGC

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

307

Start:

10043058  

End:

10043364

Strand:

-

>R1_LTR-Gypsy_44

TCCCTTCCTCTTCAAAAGGATTTGTCCACAAATCTGGATCATCTGCAAGAAAAGGAGAAAGATCAGAAACATTAAAACTTGAAGAAATATCATATTTACCTTGCAGATCAAGTTGATACGCATTGTCACTGATCTTCCTAAGTATAGGAAATGGTCCATCGATCCGGGGCATGAGTTTGGACTTCCTTTCGTCTGGGAACCGTTCCTTCCTCAAGTGAACCCAAACAAGGTCTCCTTCCTCAAAAACGACCTTGGTCCTCTTCTGGTTTGCCTTTCTCTCATAGATCTTTGTCTTGGCCTCGATGTT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1048

Start:

10043761  

End:

10044808

Strand:

-

>R1_LTR-Gypsy_45

TCTATCTCAGCTTTAGTAGCTATGTCGATGCTCAGTTTTTCGATTCCTTCTACGGGTATGATCCGTTTTACGAGGGGGTCTGATGTGGAGGCTAAAGCAGCCAACGCATCTGCTGAGGAGTTCTCTCCTCGTGGGATCCTTGTTAGCTAACTTGTCGAACTGCCTAGTGAGGTTCTGGACGACTTCGAGATATGCCCCCATTCTTTCGTCCCTCGTTTCGTATTCTCCGTGAAACTGGCTAGCTACTAGCTGTGAATCACTATAAGCGTTTATCTCTCGGATTCCGAGGCTTAGGGCGAGTTTCAACCATGCGATTAGTGCTTCATATTCAGCCTCGTTGTTTGAGGCGTTGAATCCGAGCCTATAGGACTGCTCGATGGTTTCTCCAGCTGAAGAGGTCAGCCTTAGCCCGACACCGGAGCCTTGTTTTGATGAGGCTCCGTCGACATACAGGCTCCACTTTGGAGATTCCATTTCCGAGTCTAATTGCTCGGATGCTAGCTCAATGATAAAATCGGCAAGGACCTGAGCCTTTGCTGCTGCTCGAGGTCTGTATTCGATGTCGTATTCACTGAGCTCTATGGCCCATTTAGCCAATCGCCCTGACTGGCTGGGGCTGTGCAATATCATTCGTAATGGTTGCAAAGTCATTACGATGATCGAGTGCGATTGGAAGTAGGTCGTAATTTCCTGGCGGCTGTTACGACTCGCTAGCGCTAATTTTTCCATTGTAGGGTACCTAGTTTCGGCGTCTATCAGACTCTTGCTAGTGTAATAGACAGGTCTCTGTTCGTTTTGTTTCTCTCGTACCAGCACGCCGCTAACTGCAGCAATTGATACGGCGAGGTACATATACAGTGGCTCTCCTACTACAAGTTTGGACAGGATCGGAGGTTCGGAGAGGTAACGCTTTCAATTGCTTGAAGGCTTCCTCACATTTCTCGTCCCATAAGAACTTCTTATTATTTTTTAGAAGTTTTATAAAATGGGAGGCAATTATCGGTTGACCTGGATATGAATCTATTTAATGCTGCGATTCGTCCAGTCA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

457

Start:

10047589  

End:

10048045

Strand:

-

>R1_LTR-Gypsy_46

TCTGTAATTGCTATTGGGGGGACTTTTTGAGGATTTCGAATCCTCCCAGGTAACAGATCCTGGAGATCTTCTGGCTACCATGTACGGTAGTTATCCCTTCAAGTGTTGGGAATTTCACACATTGATGATAAGTCGAGGCTACTGCTTTCATCTTGTGAATCCAGGGTCTTCCTAGGATCGCATGGAACAGGGAAGGTCTGTCGATGACTACTAAGTTGGTCATTTTCATTATTCCGCTAGCTATGATTGAGAGCTTGATAGTTCCCAATGAGGTAGCTGTTTCTCCGGAAAAGCCGACGAGATTAGCTTTTTGGCCAATAATTTCGTAGTCGTCTATTTCCATCCCTTTCAGGGTGTTGTTGAAAATAAGGTCAACAGAGCTTCCAGTGTTTATCATAAGTTTAGGCACCTCGTATCCTGCGATGTTCAGGGTGACGATCAGAGCATCATCGTGAGG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

619

Start:

10049105  

End:

10049723

Strand:

-

>R1_LTR-Gypsy_47

TCTTCCTCCAAAGTAATATATCTAGTGGCTTTATGAAGAGCATCATCGATAGTTGGAGGAGTATTGAATGTTAGCTCCGACCAGGAATCCGATTTATACCACAGACCTCTTCTAAGGGCCTCGATGGCGACTTGGTCGTTGGGATTCGAGAGCTTAGTTCTTACTGCTCTGAATTTCTCGATGTAGACTCGTAGCGAGTCCCCCATTCCTTGTCTGACCTTCCAGAGGTCGGTTTCAGAGGCTTGCTTCAGGATATGGGTCGAGTACTGCTTCATGAAGGCATTAGTTAACTGATCAAAACTGTTTATCGAGGCTGGTTCAAGACCAGAAAACCTCTCAAGGGCTGTTCCAACCAGGTTTTCGGCGAATGTCATGCAGTAACCTGCTTCACATTCTTCCTGCGTAAAATGGGCTTTCACGATAGCTAATCGGAAGGCCCTCAAATAGGCCTTTGGGTCAGAGGTCCCATCATACTCGGGAATTCTGATTTTTCGGGTATCTCTTATGTAAGAGCTGGAAATTCTGTCAGTGAATGGAGTCCCACGGGTTTCTTCAATAAAGCTCTCGATTTCGGGAGCTGAGCTCGTTGCCTTATGAACTTGAGCATTCAACTTTTGGA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

141

Start:

10063855  

End:

10063995

Strand:

-

>R1_LTR-Gypsy_48

GTTAAAAATGGGTAAAATCCATGGTATATCAACTCCCCCAGACTTACTCCTTTGTTTGTCCTCAAGCAAAAACAGTAGTCTTTGGAAAATGTTTGGAAATAGCAGGAACTCAAAGATTTAATATATTGAAGTCATCACTCT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

144

Start:

10073295  

End:

10073438

Strand:

-

>R1_LTR-Gypsy_49

ATGACTTTTGCCCACTGGGCTTTAATTTCGTTTATGTACCAGATTTGCAGCCTGAGGAGGCTTTTAAACCTTGACTTGTTTTAGGGTCTTCGGAACCCTTGGTAGCCTGGGGAAGCTTTTAAACCCTTTACTATTTAAACTTGG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

709

Start:

10074145  

End:

10074853

Strand:

-

>R1_LTR-Gypsy_50

TTGAAATGAGTTTGGGGCTGCACTCATGACGGAGTTGCCTACGTACCCAGTCAAGGGATCAATCCTAACATAGTTCAAGAAATTTTAGGTACCTAATGATAGTATCTCTTAAGATTTGTGGCGTTCCACGATCTGATTTCAGGTACCCCGGTTCGCCCCTTTTGGAGCTTGTAAACGCCAGGTCGTACCAGGTGGATAATCCGGTAGGGACCCTCCCAGTTGGTTCCTAACTTCCCAGCATCTGGTTCCTTGGTTCCTTCGAACACTTTCCTAAGTACTAGGTCGCCTACAGCGAACTGCTGGGGCCTAACTTTGGAGTTGTACTGTCGTGTCATTGCTTGCTGATAGTTTTGAATGCAAATCAGAGCTCGGTCCCGTCTTTCCTCGATTAGATCAAGGCTGTCCGTCAGGAGCTGGTCATTAGCTGCAGGATCGGACGTACAGAGTTCCCGGCGGAGGCTACCAGCAATGGTTTTGGCTGGGACGACAGCTTCCATCCCGTAGGCTAAGGAGAAAGGGGTTTCATCTGTAGCCTTTCGTGGGGTGGTTCGACATGCCCAAAGTACTTCGGGTAACTTTTCTGACCAGAGTTCCTTCTGGGTTCCGAGGCGTTTCTTGAGGTTTGCTAATACTGATTTATTAGCAGCCTCCGCCTGGCCGTTTCCTTGAGGGCGTCGGGGTGTTGAGAAGGTCAGGCGGATATTCTATT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

154

Start:

10083316  

End:

10083469

Strand:

+

>R1_LTR-Gypsy_51

CCAACTGAGTCACATACCCACCAAATTTAAGCTAAATGACTATAACAAAGCGCTGAGTGGGAGGCAACCCACTATTAGGTTTTCTTTTACTTTCTTTGTAAGTTGTTTTTACATTTTTACTTTTATTTTTCGCATTTATTTTTGCAGTTTTTCA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

202

Start:

10083532  

End:

10083733

Strand:

+

>R1_LTR-Gypsy_52

ACGACCATCATTAACGATCGACGTACATCTCTACGTATCGATCGACACCATATCGGTCAGGTTTAGTCGTTCTATCTTGTTATATTCAGTTCTTATGATTTATTTATTTACTTCACTCCGGCTGTGTTACACTGGGACAGTGTAATTTAAGTCTGGGGGGGGGGGGAGTTTACTAATATGTGTTTTTATTTTGGTTTTTATT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

135

Start:

10085887  

End:

10086021

Strand:

-

>R1_LTR-Gypsy_53

GCTCTAGTTAGCTACTCTAGAACAAACTTAGGGTGCAATCTATTTGATGAATATCACAACTTAGCAATTATAGTTTGGGGCTAATCCCACAAACCTATTTAAACCCTAGATCTAACAAGTAGACTACTCAGACAT

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1260

Start:

10115533  

End:

10116792

Strand:

-

>R1_LTR-Gypsy_54

ATTCTCCCCTACTAATAGAGAATTCGTCCCCGAATTCAAATCATGAGTCGGCTGTACAATACCATCCGAAAAAGCTCTGAACATTAAATCCTTATTTGATTCTCGGTCTCCCAGATCTCTTCTTGGATCTTGTCTCTCTCAACAAACTTTGACCAACATGGTCATCATCCTCTGAACCTTATTTTTTTATTCGCCGGTTGTATAATCTCAACTGACTGTCAAAGTGCAAACAATTTTTTTTTTTTTTTTTACCTATGATCACTTGGCGACTACTGCAAAATAATTTTTTTTTCTCTCTCCTGACCTTCCTCAAAACTGACATATGGATTACGTCTTGAAACCCTGACAACTCTTGCTGATAACTTTAAACTATAAGCCACTGCTCCAATCCGTTCTCCAATGGGGTATGGTCTCATATATCTTGGTTTAAACTTCTTTAGCTTTCGAATCTTAGATCCTTCTTGAGATGTCCTCACTTCCATATATATTAAGTCTCCACCTGAAACTCCAAATCTTTATTGTGCTGATTTGCATAACTCTTTTGACGGTCATGGGCTTCCTTAAGGTGAACCTTGAGCACCTCAACTTGCTCTACCATCTCCTGAACATTGCTGATTCAAGTCTCGTCTCTCCCCCACTTATGTCCAAAAAGTGGTGTACGACAAGCCTACCATGAAGTGCCTCATATGGTGCCATCTCATACTCGAATGATAGATGTTGTTGTAGGCAAACTCTGCTAAAGGTAGATACTTTTTGCAGCTCCTTTCTCAATCCAAAATACAAGTCCTAAAGGTATCTTCCAAAGTCTGAATAGTCCTCTCTGACTGCTCATATGTCTGCAAATGATAAGTTGTACTCATGTGAAATTTTGTATTAAGTGTCTTCTGAAAGGCTCTCCAAAATGTCGATGTGAACTTTTGCATCATGATCTGATACAATACTTACGAGAACTCCATGCAACCTCGTAATCTCTCTGATGTACATCTGCGCCAATTGATCAGCTCCATTTGTTTTCATAAACGCTAGAAAATGAGCAGACTTGGTGAATCTATCATCAACAACCCAATAGGATTCTTTCCACATGAAGCTTTTTTTTTTGTAACACAATCACAAATCCATAGTCACCAAGTACCATTTCCACTATGGCAATGGCAGATCATTCAGTAACCCGCTAAGCACAAGATTCTCAACCTTAACCATCTGACATGTTTGACACTGCGATACATTGTAGCAACATTGTTCTTCATACCAGGCCAATAA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

376

Start:

10116806  

End:

10117181

Strand:

-

>R1_LTR-Gypsy_55

TCTCTATAACTCTTAGATGTCGGTCACGCTAAAATCGTAGTGATATTTTCCAAATCTTGAGCAGCTCCTGCTTCCGGAACCACATAACCCAAAATCCCTTTTTTTTCTCCTGCCAAAAGAAAAACTTACCAAGCTAGCAAATAATTGATGCTCTCCAGCTTAACCAACACAATCCGTTAATGCTTCGCATGCTCCTCTCTGCTCAAAAAATAAATTACGATGTCGTCGATGAAGGCAATCGCACACTTATCCATGTGCTGACGAAAGACTTCGCTCATAATATTTTTGAATGCTACCGATGCATTTCGAAAACCTAATCAGCATCACCACGAGCTCATAATGTCCATAACATGTACAAAATCCCGTCTTATGTACA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

456

Start:

10117183  

End:

10117638

Strand:

-

>R1_LTR-Gypsy_56

GCTCTCAATGGTGAAGTACTCGACCTGATGAAAACCTTATCCGAGAGTTCATTCAGCTGCTTTTTCAACTCAGTTATCTCTGCTGGTATTAAACGGTACTGCGCTTGTGAAACCGGTTCTTTCCTTGGTTCCAACTCAATCATACGAGCGTCTACTCTGGCTGGTGGTTCTTCAAAAAGCCTCAAATACATCCTCATACTTTGCAACCACTGAAATGTCCTGCAACTCATGATGTCCATCATTCTTAACCATCTCGATAGTCGCCAGAAATCCCTATGCTCCCCTCTCCAATAGATCCTCAGCATGCAACATGAAGACAATAGAAATTCCCCTCTGCGCAGGAGTACCCTCAAATGCGATCTTCCCATCACCTCTAGAAATATGAACTTTTGCCCTCGGGCAATCTAGTACCTTTCGATGATGTGACAGCCAATCCATCCCAAGTATAACATCATA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

547

Start:

10161693  

End:

10162239

Strand:

+

>R1_LTR-Gypsy_57

CCGATACACATTTCGTGGAAGAGATTGCCTCGGTAGAGATGCCGCGAAAGTTCTCTTTCCCAAGCATAAAGATGTACGAAGGTACTGGGGATCCCGACAATCACATTGCTCAGTACAAGCAACACATGCTAGCAGTAGCAATCCCTCGTGATGCACGGGAAGCTACCATGTGTAAAGGATTCGGATCGACCTTGACCGGCCCTGCTCTTCAGTGGTATACCAACTTGCCCACCAAATCCATCAAATCCTTTGCGGCCCTTAGCGATAAATTCATGGAGCAGTTCGCTAGCAGCCGTGACCTTGAGAAGAATTCGGATGATCTCTATGAGATCCTCCAGCATAGGAATGATCCCCTTCGTTCTTACATAGCTCGCTTCAACCAGGCGAAGGTAGCTATTCCTGAGTGCAACGCTGATACGGCTATCTCAGCCTTCAAGAGGGGTCTACTTCCAGAGGGAGACCTTTACAAGGAGCTGACCAAATACAAATGCAGAATTATGGAAGATGTGCTGTCTCGTGCTTGGGCTCAAGTAAGATGGGAAGAAGA

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1833

Start:

10162409  

End:

10164241

Strand:

+

>R1_LTR-Gypsy_58

TCTACTTGGCCTGACATCTCCCATCTCGCGATATCCAAACCGGAGCTGATCGGTGTCTTACGACAAATGGGTCCTCAAGTCAAGTGGCCTTCCTAAGATGAAGGCCGCGGAGGCTAATCGAAATCCCAAGCGATGGTGCGAGTTCCATAGCGATCATGGTCATACTACGGAGGATTGCATAGCCCTAAAGATGGAAGTCGCCGAGCTCCTCAAGAAAGGCTACCTACGGGAATTCCTCTTGGATAAAGCCAAGAAACTTATAAATAAAGAAGGTCCCAGTCTCCCTATCGAAGTAGCTCATGCACTGCCACCACAGCAAGATCGGGTGATCCACGTCATCACCGGCGGATCAGAGGTGAGCGGAATTAGCAGTGCCGCAGCCAAGAAAAGTACTCGTAATGCCAGGAACAGCCAAGAGGCCGAGGGTCCCAAGGGCCTACTCCTTGGAACAGATGAGATCAGTTTCACTACAAGGGAGCAGGAGAAGGTCCTCACCCCTCATCATGATGCTCTCGTCATTTCACTTACCATAGCAAACTGCTTGGTTAAGCGGATACTAGTAGATAATGGGAGCTCCAGCAACATAATCTTCCATTCGGCTTTCACTGACCAGGGTTTGGAACCTACAGCTCTAACCAGAAAGGCAACTCCTCGCGTAGGCTTCAGTGGAGAAGTCAAATAAACCTTGGGAGAAGTCTTTCTTCCTGTGTATGCCGAAGGGGTAACCCAAGCCATGAAGTTCCTGGTCGTCGACTGCCCCTCATCATATAACGTGATATTGGGAAGGCCTTGGATCCATGACATGGGAGCTGTACCTTCAACTTTGCACCAGCTGGTCAAGTTCCCAACCCCTTGGGGCATCAGAGCGGTCAAGGGGGATCGGGAGAATGCTAGGTCTTGCTATCAGACTACCCTTAGGGGAAAAAGACTCAGGTCTTATAGCAATTACAGAGAGCCGGAACGTGGAAGAAAATGGATGAGGTCCCACTCACGGAGGAACGTCGAGTCGAAACTTAAAGATAGGCTCCAAGCTGCCGTAAGGCTTTAGAAGGAGACTGGTCGATTTCTTAAGATCCAACTCCAATTGCTTTGCCTGGTCTCACGAAGACATGCCTGTAATTGATCCCGATGTTATCATGCATCAACTCAAGGTGGATCTAATGCATCCTCCTGTCAGACAGAAGAGGAGAAAATTCGCCCCTGAAAGGGATGAGATAATCAACGAAGAGGTCAAGAACCTACTAGATGCTGGATTCATACGAGAGGTGCAATACCCGGAATGGTTAGCCAACGTGGTGGTCGTCAGGAAGAAGAATGGGAAGTGGAGAGTCTGCATCGATTTCACGGACCTTAATAAGTCCTGTCCTAAAGATCCTTTCCCTCTGCCTCACATTGACAAGCTGGTCAACGCAACAGCAGGCCACGAGCTGATGATTTTCATGGATGCGTTCTCTGGATATAACTAGATCCTAATGCACCCTGACGATCAAGAGAAGACCTCATTCATGATCTCAAGGGGTATCTACTATTACAAGGTTATGCCTTTCGGGTTGAAGAACGCCGGCTTGACCTACCAAAGGCTTATCAACATGATGTTCGCCGACCAGATAGGGCAGACCATGGAAGTCTACATTGATGACATGTTGGTAAAGTCCCTAGACGTCGAAGATCATATTTAACATCTTCAACAAGCCTTCACCACTCTCAGGAGATACAATATGAAGCTAAACCCTTCAAAATGCTCGTTCGGAGTAAGCTCTGGAAAGTTCCTAGGGTACATAGTCACTCAGAGGGGCACTGAAGCTAACCCAGAGCAGGTGAGAGCAATCCAGG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

884

Start:

10180678  

End:

10181561

Strand:

+

>R1_LTR-Gypsy_59

AGAGCCGGAACGTGGAAGAAAATGGATGAGGTCCCACTCACGGAAGGGAACGTCGAGTCGAAACTTAAAGATAGGCTCCAAGCTGCCGTAAGGCTTTAGAAGGAGACTGGTCGATTTCTTAAGATCCAACTCCAATTGCTTTGCCTGGTCTCACGAAGACATGCCTGTAATTGATCCCGATGTTATCATGCATCAACTCAAGGTGGATCTAATGCATCCTCCTGTCAGACAGAAGAGGAGAAAATTCGCCCCTGAAAGGGATGAGATAATCAACGAAGAGGTCAAGAACCTACTAGATGCTGGATTCATACGAGAGGTGCAATACCCGGAATGGTTAGCCAACGTGGTGGTCGTCAGGAAGAAGAATGGGAAGTGGAGAGTCTGCATCGATTTCACGGACCTTAATAAGTCCTGTCCTAAAGATCCTTTCCCTCTGCCTCACATTGACAAGCTGGTCAACGCAACAGCAGGCCACGAGCTGATGATTTTCATGGATGCGTTCTCTGGATATAACTAGATCCTAATGCACCCTGACGATCAAGAGAAGACCTCATTCATGATCTCAAGGGGTATCTACTATTACAAGGTTATGCCTTTCGGGTTGAAGAACGCCGGCTTGACCTACCAAAGGCTTATCAACATGATGTTCGCCGACCAGATAGGGCAGACCATGGAAGTCTACATTGATGACATGTTGGTAAAGTCCCTAGACGTCGAAGATCATATTTAACATCTTCAACAAGCCTTCACCACTCTCAGGAGATACAATATGAAGCTAAACCCTTCAAAATGCTCGTTCGGAGTAAGCTCTGGAAAGTTCCTAGGGTACATAGTCACTCAGAGGGGCACTGAAGCTAACCCAGAGCAGGTGAGAGCAATCCAGG

Raphanus sativus (v1.0)

ID:

R1_LTR-Gypsy_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

86

Start:

10211412  

End:

10211497

Strand:

-

>R1_LTR-Gypsy_60

TGATAGTGCTCAAATTACCCAATAGAGCTTACTTTCTAAAATAAGAGCTACATCTGTAGTACTTAGGGATCGAATCATGAGGAGTT