ID:

scaffold_2_LTR-Caulimovirus_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

184

Start:

4661890  

End:

4662073

Strand:

+

>scaffold_2_LTR-Caulimovirus_61

ATCAAGAACCCAAATATAAAGAATCCTGACGGAACGATAAATCAAGCTATTGTTATAAAAGTAACCTTGATTTGGCATTTAGAAAACTCAGCAACTCAAAATCACCTCTTACACCAAATTGATAAGAAAAAGTCATTATTTCATATATTTCCAGAAAAGAAATAACAAAAAATATGTCATCACT

ID:

scaffold_2_LTR-Caulimovirus_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

170

Start:

4662076  

End:

4662245

Strand:

-

>scaffold_2_LTR-Caulimovirus_62

GAGAGGGTATTTTTTTTGTGATTTCCTTTATGGAAATATCGAGAATGGTTAACTTTTTATTAATTTGGCTCAACAGGATACTCTGAGCTGCAAAGTTTTCGGATTGCCAATTTACGGTTGCTCTCGCATCATTGATTTGCTTCACTGTTCCATCAAAATTCTTTATGTTT

ID:

scaffold_2_LTR-Caulimovirus_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

121

Start:

4662241  

End:

4662361

Strand:

-

>scaffold_2_LTR-Caulimovirus_63

TGTTTTCCTTGTATCCTTAGGTGCTAAGAATATAAAGAAAACAATTATGAGGTACCAGCTATGCAAACAGAGGCAACACAATTCTTTTATCAAATAAGTTTCAAGGTGTTTAGAGGTTATA

ID:

scaffold_2_LTR-Caulimovirus_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

94

Start:

4665436  

End:

4665529

Strand:

+

>scaffold_2_LTR-Caulimovirus_64

CCTCCTACATACGTGGTTGTACCTACTATGTGTTTTGGTATCAGAACCATGGCAGTCTAAGCTTTAGCTCTTCGATATATAAAAGGTAGTATGC

ID:

scaffold_2_LTR-Caulimovirus_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

4667788  

End:

4668119

Strand:

+

>scaffold_2_LTR-Caulimovirus_65

ACCGGTGCCACACAAATCAGAAACACATATGCAGCGACATTACATCAGCAAATGGCATATAGAGTCCAGAATTATGCAATGGACCTAAGTCTCCCTCGCGACACTGAAGACGCCTTACTTATTCAACTAGAGTCACAACACAGTTGATCGTGCATCCACATTCCAAGGCAAATCTCAAGAAGCGAGATAGTCAAGCTACTCCCATAATCATGGGTAACCAATTATGAAAAACTCCATGCAAGGAGTACACCAATACAATCAGTGGATTCCTCTATCCATAAAAGAAAAGATGGAAATGTAGAAATCGCATTCAAAGCACAAGAAAAAAATCA

ID:

scaffold_2_LTR-Caulimovirus_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

524

Start:

4668120  

End:

4668643

Strand:

-

>scaffold_2_LTR-Caulimovirus_66

TTCTTCCATGTCCGGGGTTCCTGGGGTCGGGCTATTCAAATACAAAACATAGTAATCAAACTTTCCACTACTTGTTTCACCAAGAAGTCCGACCTGAGGATCTCCTGATTCGTATCTTTCTTTGAGGATTTGTTGTGAAGATTTCCTTCGTCTTCTCCGCCTCGAGACTTCTTCTTCATCAGAATCGCCTTCTAGACATTTCTGACAATCACAAACATCGAAGAATTTGTGACCAGATTCAATCAGGAATGCGTAGACAGGGTTTCCAAGCGAGTCAAAAGATGAGATTGGAACGCCAAGCAGACGTGAATCTATCTCCATGAATTCTTTTTCGCAGGCAGGAGTGATCATGTTGATCTCAGTGAAAAAAGTTGTTGGTCTTGAATTTTTTTGTTGTGCTTTGAATGCGATTTCTATAGCTCCATCTTTTCTTCTATGGATAGAGGAATCAACTGATTTTATTGGTGTACTCCTTTCATGGAGTTTTTCATAATTGGTTACCCATGATTCTGAGAGTAGCTTGA

ID:

scaffold_2_LTR-Caulimovirus_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

834

Start:

4679522  

End:

4680355

Strand:

-

>scaffold_2_LTR-Caulimovirus_67

AGAAAGATGATGATCCAAATATACTTGGGTCTTGGGAATATGAAAGGGGTTGTGATTGGGCTGCGTAGGATGGTGTATATATAGGATAAGGTGTAAAGAGGTCATAAGGCATTAGGGGTTGTGTTTGTCGCTGATTTTGTAAGGAATTTAGTTGGGCTTTAAGGCTTTTTAGCTCAGATTCCTTTTGGGCCATGATAGAAGAGTTTATGGAAACAGTAGCTAGTAGCCAACTGGAGGAGTTCTTGGTGGAGCGAAGACATCTTTTCTGTTATCTCCTGCATAGAGAGTTCCAAAATGGTTACATTTTTGTCGATCTCGCTCAAAAGATTGTTTTGGCTTGCAACATTTTCTGATTCCCAATTCAAAGTTGCTTCGGCCGCACTAACTTGCTTTACTGTTCCGTCAAGGTTTTTTATGTTTGGATTCTTGATTTTCCACGAGTGTTTGATAATGTTTTCTTCAAACTCTTTTGATGGAAATGGTGACTGGGATGAAGGACCAAACATGTAGCTCAATGGTGGTTCTTCCCTATATGGGGTTGCTGGAGTGGAGCTATTCGGATACAAAACATAGTAATCGAATCTTCCACTACTTGGCTCTCCAAGAAGTCCAACCTGAGGATCTCCTAATTCGTATCGTTCTTTGAGAATTTGTTGTGAAGATTTTCGTCCTCGTCTTCTCCTTGGAACTTTTTCTTCATCAGAATTGTCTTCTAGACATTTCTGACAATCACAAATATCAAAGAATTTTTTACCATAGTCATCCATGAACGCGTATACAGGATTTCCAAGTGAGTCGAAAGAAGAGATCGGAATGCCGGGCAAACGGGAATCT

ID:

scaffold_2_LTR-Caulimovirus_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

378

Start:

6056362  

End:

6056739

Strand:

+

>scaffold_2_LTR-Caulimovirus_68

CCTTATATGTGGTTGTACCTACTATGTGTTTGTAATTTTGGTATCAGAGCGATGGTAGTCTAAGCTTTCACTCTTTGATATCTAAGAGGTAGTATGCCATACTATTGTTTTCTATTATATATGCTTTGCATAGAGAGTATGCTTTGTGGTTGCCATTTTTAATGGATCCTCCACATCAGAAATCTTGTTAAGCTGGTATAAAAGAATTAAAGAAATGATCTGTGAGGTCATAATGCTTGAAGTACCTTGAGGCTTATTTGATGTGAGTTATTTGCCTCAGTTTGCATAGCTTGTACCTCATGATTATTTTCTTTATATTCTTAGCACTTAAAAGTCCCATGAAAACAGCTTATGGATTGTTACTACTTTGAAAATTGA

ID:

scaffold_2_LTR-Caulimovirus_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

123

Start:

7130093  

End:

7130215

Strand:

-

>scaffold_2_LTR-Caulimovirus_69

CCACTACTTGGCTCTCCTAAAAGTCCGACTTGAGTATCTTCTGATTCGTATCATTATTTGAAGATCTGTTGTGAAGATTTCTTTCGTCTTCTTTTCCTTGGAACTTCTTCTTTATTAGAATCG

ID:

scaffold_2_LTR-Caulimovirus_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

106

Start:

8579161  

End:

8579266

Strand:

+

>scaffold_2_LTR-Caulimovirus_70

AATCTAAGGAAGCGAATTAGTTAAGCTACTTCCAGAATCATGGATAACCAATTACGAAAAACTCCATGAAAAAAGTACACCAATACAATCAGTGGATTCTCCTTTC

ID:

scaffold_3_LTR-Caulimovirus_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

298

Start:

7900826  

End:

7901123

Strand:

+

>scaffold_3_LTR-Caulimovirus_71

ATCAGAAAATGCTGCAAGCCAAAACAATCTCTTGAGCCAGATCGACAAAAAGGTAACCATTTTGGAACTCTCTATACAGGAGATAACAAAAAAGATGTCTTCCCTCCATCAAGAACTCCTCTAGTTGGCTACTACTGTTTCCATAAACTCTCCTATTATGGCCCAAAAGGAATCTGAGCTAAAAAGCCTTAAAGCCCAACTAAATTCCTTACAAAATCATCCACAAACTCAACCCCAAATGCCTTATGATCTCTTTACACCTTACCCTATATATACACCACCCTACGCAGCCCAATCA

ID:

scaffold_5_LTR-Caulimovirus_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

760

Start:

5276681  

End:

5277440

Strand:

+

>scaffold_5_LTR-Caulimovirus_72

CCTCCTACGTGGTTGTACCCACTATGTGTCTGTAAATTTGGTATCAAAGCCATGGCAGTCTAAGCTTTGACTCTTCGATATCTAAGAAGTAGTATGCCATATCGTTGTTTTCTATTATATGCTTTGCATGGAAAGTATACTCTGTGGTTGCCATTTTTAATGGATCCTCCACATCAGAAATCTTGCTAAGTTTGAATAAAAGATCTAAAGAAAAGATCCGTGAGGTTATAATGCTCGAAGTACCTTGAGGCTTTATTGTTGATGAGAGTTGTTTGCCTCGGTTTGCATAGTTAATACATCATGATCATTTCTTTATGCTCTTAGCGCTTAATACGTCCTATGAAAACAACTTATGGATTATTACTACTTTGAAAATTGAGAAGAAGTTAATAGCATTCTGTCTTGGTTTCTGGTCTCTTTATCTATTATGGAAAATATGTCAACTTTGTCCAAAACACCCACTTTCCGCAAATCCACCTCTAAAAAATTAGATTATTTATATAAAATTGAGTACATGAGTGATGAGAGTAAAGTTCCTATTACCCAACTTCCTTTGCTTAATCCTTATAAAGCCTTCTTAAAGCCAAATTCCAATTTCCCTAAAGTCATCAGACAAGTGTTTGTACCTAACAAACATACTGCTAAAGAGCTCGTTCTAGCCTCTCCTCTAGAACAGTTTATGGTCCCTGCAACATAAGCAGAGCAAATGGTTCCTCTCTACCTTAATGAAAGAATTATACACCATTTGGCGAAGTCTTAG

ID:

scaffold_6_LTR-Caulimovirus_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1025

Start:

9875492  

End:

9876516

Strand:

-

>scaffold_6_LTR-Caulimovirus_73

AAAAAGATGATGATCCAAATACACTTGGGTCTTGAGAAAAAGAAAAGGGTTGTGACTGGACTGCGTAACATGGTGTATATATAGGATACGGTGTAAAAAGATCATAAGACATTTGGGCTTGTGTTTGTGGTTAATTTTGTAAGGTGTTTAGTTGGGCTTTAAGGGTTTTTAACTCATATTCTTTTTGGGCCATAAGGGGAGAGTTTATGGAGACAGTAGTAGCCAACTGGAGGAGTTCTTGATGGAGGGAGGACATCTTTTTTGTTATCTCCTTCATAGAGAGCTCCAAAATGGTTACCTTTTTGTCGATCTGGCTCAAGAGATTGTTTTGGATTGCAGCATTTTCTGATTGCCAATTCAAATTTGCTTCGGCTGCATTGACTTTCTTTACTGTTTCGTAAGAGTTTTTTATGTTTGGATTCTTTATCTTCCACGAGTGTTTGATACTGTTTTCTTCAAACTCTTTTGATGGAAATGGTGATTGGGATGGAGGGCCAAACATGTAGCTCAGTGGTAATTCTTCCCTATTCGAGGTTGCTGGAGTTGAGCTATTCGAATACAAAACATAGTAATCAAATTTTCCACTACTTGGCTCTCCAAGAAGTCCGACTTGAGGATCTCCTGACTTGTATCGTTCTTTGAGGATTTGTTGTGAAGACTTCTTTCCTCTTCTTCTCCTTGGAACTTCTTCTTCTTCAGAATCGTTTTCTAGACATTTTTGACAGTCACAAATATCAAAGAATTTGTGGCGAGAGTCATCCATGAATGCTTAGATAGGGTTTCCAAGTGAATCAAAAGATGAGATTGAAACGCCAGACAGACGTGAAGCTATTTCCATGAATTGTTTTTCGCAGGCAGGAGTGATCATGTTTATCTCTGTGCAAAAAGCCGCCGGTCTTGACTTTTCTTCTTGTGCTTTGATTGCAATTTCTACAGCTCCATCTTTTCTTCTATGGATAGAGGAATCCACTGCTTGTCTTGGTGTACTTCTTTCATGGAGTTTTTCATAATTAGTTACCCATCAT

ID:

scaffold_6_LTR-Caulimovirus_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

674

Start:

11988813  

End:

11989486

Strand:

-

>scaffold_6_LTR-Caulimovirus_74

ATTGTTCTAGAGGAGAAGCTAGAACAAGTTCTTTCGCTGTATGTTTGTTAGGCACAAACACTTGGCTGATGACTTTTGGGAAACTAGAATTTGGCTTTGAGAAGGCTTTGTAAGGATTAAGTAAAGGAAGTTGGGAAATCGGAACTTTTCTCTTATCACTCATGTATTCTATTTCATATAGATAATTTACTTTTTTAGAGGTGGATTTTCGAAAAGAGGGTGCTTTGGATAAAGTTGACGTGTTTTCCATAATATATATAGAGACCAGAAACCAAGACAGAATGCTATAAACTTCTTCTTAATCTTCAAGGTAATAACAAACCATAAGTTGTTTTCATGGGACTTTTAAGCGCTAAGAACATAAAAAAAATGATCGTGAGGTACTAGCTACGCAAACTAAGGCAAACAACTCACATCAAAATAAGCCTCAAGGTACTTCGAGCATTATGACCTCACAGATCTTTTCTTTAATTCTTTTATACAAACTTAACAAGAGTTCTGTTGTGGAGGATCCATTAAAAAATGGCAACCACATAGCATACTCTCTATGCAAAGTATATGTTAGAAAACAACATTATGACATACTACCTCTTAGATATCGAAGAGCTAAAGCTTAGACTGTCATGGTTCTGATACCAAATTTACAGACACATAGTAGGTAAAACCACGTAGGA

ID:

scaffold_628_LTR-Caulimovirus_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

147

Start:

181  

End:

327

Strand:

+

>scaffold_628_LTR-Caulimovirus_75

AGGAGATAACAAAAAAGATGTCTTCCCTCCATCAAGAACTCCTCCAGTTGGCTACTACTGTTTCCATAAACTCTCCTATTATGGCCCAAAAGGAATCTGAGCTAAAAAGCCTTAAAGCCCAACTAAATTCCTTACAAAATCAGCCAC

ID:

scaffold_95_LTR-Caulimovirus_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

507

Start:

18859  

End:

19365

Strand:

+

>scaffold_95_LTR-Caulimovirus_76

CCTCCTACGTGGTTGTACCCACTATGTGTCTGTAAATTTGGTATCAGAGCCATGGCAGTCTAAGCTTTGACTCTTCGATACCTAAGAGGTAGTACGCCATAGCGTTGTTTTCTATTATATGCTTTGCATGGAAAATATGCTCTGTGGTTGCCATTTTTAATGGATCCTCCACATCAGAAATCTTGCTAAGTTTGAATAAAAGATCTAAAGAAAGGGTCCGTGAGGTTGTAATGCTCGAAGTACCTTGAGGCTTTATTGATGATGAAAGTTGTTTGCCTCGGTTTGCATAGCTAATACCTCATGATCATTTCTTTACGTTCTTAGCACTTAATAGTCCCATGAAAACAACTTATGGATTGTTACTACTTTGAAGATTGAGAAGAAGTTATTAGCTTTCTGTCTTGGTTTCTGGACTTTTTATCTATTATGGAAAATATGTCAACTTTGTCCAAAACACCTTCTTTCCGCAAATCCACCTCTAAAAAAGTAGATTATTTATATGAAATA