ID Class Order Superfamily Length Start End Strand View
scaffold_4_LTR-Caulimovirus_41 RetrotransposonsLTRLTR-Caulimovirus57739732383973814-
scaffold_4_LTR-Caulimovirus_42 RetrotransposonsLTRLTR-Caulimovirus97439739233974896+
scaffold_4_LTR-Caulimovirus_43 RetrotransposonsLTRLTR-Caulimovirus195139750183976968+
scaffold_4_LTR-Caulimovirus_44 RetrotransposonsLTRLTR-Caulimovirus93839824323983369+
scaffold_5_LTR-Caulimovirus_45 RetrotransposonsLTRLTR-Caulimovirus34145880324588372+
scaffold_5_LTR-Caulimovirus_46 RetrotransposonsLTRLTR-Caulimovirus34546594374659781+
scaffold_5_LTR-Caulimovirus_47 RetrotransposonsLTRLTR-Caulimovirus33252774395277770-
scaffold_6_LTR-Caulimovirus_48 RetrotransposonsLTRLTR-Caulimovirus6341075774010758373-
scaffold_6_LTR-Caulimovirus_49 RetrotransposonsLTRLTR-Caulimovirus6731075839510759067+
scaffold_6_LTR-Caulimovirus_50 RetrotransposonsLTRLTR-Caulimovirus2751075922010759494+
scaffold_6_LTR-Caulimovirus_51 RetrotransposonsLTRLTR-Caulimovirus3321085674210857073-
scaffold_8_LTR-Caulimovirus_52 RetrotransposonsLTRLTR-Caulimovirus23638313093831544+
scaffold_8_LTR-Caulimovirus_53 RetrotransposonsLTRLTR-Caulimovirus29238324333832724+
scaffold_8_LTR-Caulimovirus_54 RetrotransposonsLTRLTR-Caulimovirus33238345213834852-
scaffold_8_LTR-Caulimovirus_55 RetrotransposonsLTRLTR-Caulimovirus88338350003835882-
scaffold_8_LTR-Caulimovirus_56 RetrotransposonsLTRLTR-Caulimovirus47638387633839238-
scaffold_948_LTR-Caulimovirus_57 RetrotransposonsLTRLTR-Caulimovirus22413821605+
scaffold_95_LTR-Caulimovirus_58 RetrotransposonsLTRLTR-Caulimovirus3321965219983+
scaffold_18_LTR-Caulimovirus_59 RetrotransposonsLTRLTR-Caulimovirus5936202562617-
scaffold_2_LTR-Caulimovirus_60 RetrotransposonsLTRLTR-Caulimovirus9921129482113046+

< 1 2 3 4 > Total 4


Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Caulimovirus_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

577

Start:

3973238  

End:

3973814

Strand:

-

>scaffold_4_LTR-Caulimovirus_41

TTGGTTAAGGAGCATCGTTCCATGTTGTATTTTCTCCACCATTTGATCATGAATTCTCATACTAGTGTGATTAAGGCATGTCGGGTAGGAATGTTATGAGGTTATAATGCCATGATAGAATCTAGGGTATTCCCACATCGATGTGGAAAGCTACCTTGGGTAAAGGGCCGATCAGTTGGTGTTTTATTTGTTTAGTATAATAGGGTAGTGAAACTTTGGGTATTTGAGGTGGATATATGTCATTGGAGGGGCCGAACCAGTACCACCATTCATAGAACCATCCTGGTATTGTCTTGGGGCAATGGAAATCAAAAGAGAGGAACCAGGAGTGATCATAGGTTCGTAGGTAAAAAGTATTGAGAAAGACTTTTTGGTAATCTATGTAGGTAAATCTTGGTATATGATAACATGGCATGGGAAATCTTTTGATGTGTGGAGGTTAATAAACCCGAGATCTTGGGGGTTGCATATTTTGAGTATTTTGCAAGTGGAGTAGGAGATGAGGTTTGGGGTTCTTTTTGCCCGTATGGTGGGTTATTTCAACTGAATTTGTATATACGAGAATGAATTCGTAAAA

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Caulimovirus_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

974

Start:

3973923  

End:

3974896

Strand:

+

>scaffold_4_LTR-Caulimovirus_42

GAAGCGTTGATAGCATAGGTGTTCCAGGCTGTAAGTCCCGAAGGCAGTGAGTCCGTTGGTAAGCCCGTGCATCACCCGTCGTCGATAAGAACGGTTAGTTTACATTTTAGCATGAGTTTAAGAATACTTTAGACATGGCACCTACGCTTAAAAAGTTGTTTAAGTCTAAACATGCATCATCCTCTACATCTCAAAAAACAATTAATTCAAGAGCAATCATGTCAAAAATTAAAACTTTCAATCGAGAAATATCAAATGACCAACTACCACATATTAGTCCAGAAAATATATATCAAAGAGGAACTTTTGATTTTAAAATAGTGTATTCAATAAAAGAACATGAACAAACTTTATCTTTACAAAAATGAATTTGAAGAAATTAAGTTACATTCTTCTATGGCTTTAGAAAATTATAAAAGAAAGAAATTTAGTTATAATTATAAAAGAAAGAAATTTAATTATATTCATTTTGGTCTAATACAAATAGCAATAAAACCTTCATCCAGAACGACGATAGATTCTCCAATACTAATGTTATTAAGAGATAAAAATCTTTTAAAGTTTGAGGACTCCTTGTTAGGAGCTGTACAATCAAACTCATGTAACAGAGCTATATACTTTAATTGTGCTCCAAAGTTTCAAGTAAGTTTACATGACCCAACAATATTCAATACTTTAGTTTTAAACGTACACTTGCTTGAAATTAAATTTCAGCAAGAAAGACACGGGTCTTTATTGTTGTATCGGATTTACTTTAAGCAATCTACATCTGAGTCTAATCCTCGATGTTTGTTGCAAGATGACAAAGGCGAAACAACAATATTAGCTGTACATAGTAAAGATACTCCAACCTCTACCTATACACCTAAACAATTAAAATGAACAGAAATAACAATCCCTGATCAATGGAAAATTAATATTACTCAACCACCGAGAAACTTTGAACAAAGAACTATTACAAGTATAACAGAACA

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Caulimovirus_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1951

Start:

3975018  

End:

3976968

Strand:

+

>scaffold_4_LTR-Caulimovirus_43

AACCCATTAACTTTCAAGCACCAATAGCTGAACCAATTCAACCATCATAGGTAGGGTCGTCTAACTTTCCTACTTTTCCAACTCCTTCAGATTTTAAATCAATAAATGTTATTTTGAAAGTATTTACGATAGATAAGCATTATCTTAAAGAAGAATTTTTATCACATCAAAATAAAGATAAAAGAAATAGTACTTTGAAACTTTTACTAAAGAATTACTTAAAACTTTTAGAGAAATATGGTACAGTCACATGGAAATTATAGAAATAATTATTCCATTTTTTACATGGTTTGAAACCTACGCTTTAGAAAACAAAATAGACTACCCATATAAAGATAGATCAATAAACACTAGTTCAACCTTATGTCATACGTGGGAAATGACTAACTAGAAAACACATAAATCAGTCCATCCACCGTTAATGGATATAAAAATTCACACTCCTCAAAGACAAGTAATAGCTACACCTTTTAGAACTTGAGCAACCAGAGATGATAGAGATTCAATAAATATGGCTGACATTAAAATAGTATATGAACAAAATAATTACCAAAGTCAAAAACTACATAGTATTTCACGGAAAGTTGATCATATAGATAACAAATTAGATAAAGACAAATTTTTTTAATAACAAACTATAAACCATTGTTACCACCTTTTAACACAATATCACCACCCCTTTTTAAACAATTGACTAAACCATTAAATTCCCAGAAAATGAAATTTTAAAATCAATTTCAAGTAAACTAGATAGACTAGACAAAGGTAAGGGTATAAACAATATTGATAAAAACATTCAGTCTGAAACCGATATAGAAATAAATTGAATAAAAAGAAACTACTAGCAATCCAAAAAACCATATTATCCAAGACACTCTTCACCCGACCTATTATTTGAAGAGCATAATAAATTTCTCTCCACAAACTTTTATAACGGGGAAAGGATATATGAATGGAACATAGATGGAAGGTCCAAATATGAAATAATGGACTTTTTTTTAAGAAATGGGAATGGCTACCTTAGCTTATAAATCTAAAGGAATGTCAGATAAACAAGCATGTCTGCTCTTAATCTCAAGGTTCAATGGTGCCTTAAAATTTTGGTGGGATAATGCCTTAGATATAACACCACAAGATTCTATTATAAACCATACTGAAACTATAAGAGTAGAAGGGGATGATGGTTTTTATGAGGAAGAACAAATTCAAAATGCTGTTGAACTATTACTTCAGACAATCACCATGCATTTCGTAGGTAATCCTTCTGAAGAACTTACAAGTAAAAAACTTATTTTAACAAACCTTAGATGTCCAACACTAGGAGACTTTAAATGGTATAAAGACATATTTATAACAAACATATTTCAAAGAATCGACTGCAACCAACCCTTCTCGAAAGAAAGGTTCATTGCAGGATTACATTCGTTCTTTGCAGAACGATTAATTAGTAAACTAAAAGATTTTTCTGGCGGACAACTGGTACCTTGGGATACCATAACTTATGGTCAGTTGGTTGTCTTTGTTAAAAAGGAAGGATTACAAATATGTCAAGAACATAAAGATAAACAAAAAGAAACTAACAAATTTAAATTCGGTGAAACTATGGGCTCATTTTGTGAGCAATATGGTTATCATCGTCTCACTCCACCATCTAGAGAAAGACGAAAGATACATAAACAAAATAAGTCATTATACCCACAACCTTACAATAAAAGGAAAAGATTTTCAAAAAGATTTTCTAACTCGTACTACACAAAAAATAAAAATACTAAACAACCAAATAAAAAAGAGAAAATTATATGTTGGAACTGTAAACTAGCAAGACATATATCTACTGATTGCAAATGAAAAGAAAAATTAATGAAATATTCCACGATCAACAAGATATTAAAGAAAAATTAGAAAAATTACTTCTTTCAAAAACAGAAAATTCAGAAGAACTTAGTAGCGA

Capsella rubella (v1.1)

ID:

scaffold_4_LTR-Caulimovirus_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

938

Start:

3982432  

End:

3983369

Strand:

+

>scaffold_4_LTR-Caulimovirus_44

AACCATTTAGTCTTAATAGAATAATAGAAAAGTATCCTTCCCCAACACTGTTTAAACAAGTAACTACCGGTGGATTGCAAGGAGAAGTAAGAAATTTAAAAGCACAAATAAAAGAATTACAACTAATAGTTCACTAACATCAGCTTCACCAACTACAAGTAGACGCTAGATTAGCTCTTATAGAACCCAAAATCCACCAATCTCAACCCATAACAACGGATGAACCCTCCACAAGCAACCCTGATAAACATGAGAAAACATAAGAAGAAGAATATATCCAAATAATAAATAAAATAAACTATCAAAAATGGTATACGAAAATAACATTACACATTGGGTATGATTTTAAACTAGAAACCATAGCACTTTTAGATAAATGAGCTGATTATAACTGTATTATAGAGGGAATAAATTCCTACAAAATTCTACGAAAAACATACGAAAAACTTAGTGGTGCAAACGGAAGCAGTTTAAAAGTTAATTATAAATTACCTAAAGCAAAAATTTGTAATAAAAACTATTGCTTTAAAACACAACTTATCCGTGTAAAAAATTTAAGTAAAGAAGTTATACTAGGAATTACTACAAAAATTGTAAGAGAAAAGATAATATTTGAATTTCTATCACCAATGAAAACAAAAGAAATTTTACCTTTACAGAATTCCACAATAGAAAAATCTATAAACCTAATAGATAGAAAACAAAAACATGTTCTATACTTATAACAAGAAATAAAATACCAACAAATAGAACAACAATTACATGATCCACAAATAATAAAAAAGTTAAAAAAAAATAGAAACTGAACTCTTAACCCAAATATGCTATGAACTTCCAAATGCATTCTAGGAGAGGAAAAAACATATTGTTGAAATACCTTTCGGAAAAGACTTCAACGAAAAGCATATTCCAACTAAAGCTAGGCCCAATCAAATGAA

Capsella rubella (v1.1)

ID:

scaffold_5_LTR-Caulimovirus_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

341

Start:

4588032  

End:

4588372

Strand:

+

>scaffold_5_LTR-Caulimovirus_45

ATTCTGCAAACAGATGCAAGTGATTGTTATTGAGGAGCAGTTCTCTTAGAAGAAGATGGAAAAAGAAACATATATGCGGATACAAGAGTGGTGCTTTCAAAGACAGTGAAAGGCATTACCATTCGACCTACAAAGAGATTATCACAGTGAAAAGAGGAATTGAAAAATTCGAGTTTCATCTAGTTGGTCAACATTTCCTTATCGAGATGGATATGTCTTCTTTCCCAAAGATGATACAGTTCAAACAAAAGGTCTTCCCACAGTCACAATTACTTCGATGGGCAAGTTGGTTCTCAAAGTGGAAGTTTGATGTCAACCATATAAAAGGAAAAGACAACTTT

Capsella rubella (v1.1)

ID:

scaffold_5_LTR-Caulimovirus_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

345

Start:

4659437  

End:

4659781

Strand:

+

>scaffold_5_LTR-Caulimovirus_46

ATTCTGCAAACAGATGCAAGTGATTGTTATTGAGGAGCAGTTCTCTTAGAAGAAGATGGAAAAAGAAAGAAACATATATGCGGATACAAGAGTGGTGCTTTCAAAGACAGTGAAAGGCATTACCATTCGACCTACAAAGAGATTATCACAGTGAAAAGAGGAATTGAAAAATTCGAGTTTCATCTAGTTGGTCAACATTTCCTTATCGAGATGGATATGTCTTCTTTCCCAAAGATGATACAGTTCAAACAAAAGGTCTTCCCACAGTCACAATTACTTCGATGGGCAAGTTGGTTCTCAAAGTGGAAGTTTGATGTCAACCATATAAAAGGAAAAGACAACTTT

Capsella rubella (v1.1)

ID:

scaffold_5_LTR-Caulimovirus_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

5277439  

End:

5277770

Strand:

-

>scaffold_5_LTR-Caulimovirus_47

AGATCCATAGCATGATTTTGGACTCTGTACGCTATTTGATGGTGTAGGGTTGCTGCATATGTGTTTCCGATTTGTGGAGCGCCGGTAATCAGGAGTTGGATCTGCATGTTCCGACAGATTTGTGGGTCTTCTAAAGCCACGTTAAAGTTTGGGAAAAGAGTCACGAAGATAGTGTTAACATTTAATGTCGTCTGGATAGTTGCGATGCAAGCATGTTGGTACTCTTTGTATCTGGTGTCGAGGAGAGCGGCTCTTGCCACTACCAGTAAGCTTTTTCTTCCATGAAGGGTTAACGCTAGACGTATTGCTCCATAGTGAAGATGTGTATAGCC

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Caulimovirus_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

634

Start:

10757740  

End:

10758373

Strand:

-

>scaffold_6_LTR-Caulimovirus_48

TATGGGATAAAATCCGCCATGTAGTTGACAATGCCTAGGAATTGCGGAACTTGCTTGAATTTTAACTTTTCATCTGGAAATTCGTCAAGTTGAGTTGCAATGTGGGACTGGAGATGATATTCGCCCTTTGAAATGTGCATTCCCAAAAAGTCGATTTATGTATCTCCGATCACCGTTTTCTTCTCCGAGAGCATTATCCCATATTGTTGCACAATGTCATGGAACTTCGTTAATAGGACAGTGTATGAATCGATGTCTGGTGAAAATAGTAGTATGTCGTCGATGTAGACCAGCTCGTTTGGAAGGATTGGCTCAAATATATTTATCACGGCCATCTGGAATAAAGAAAGGGCTACCTTTAATCCAAAAGGCATGACTTTCCAATGATAGTGCCGGTCTGGTACGCAGATACTGTTTTTGGTCTATCTTCACGTTTAATCCCCAGTTGCCACAAACTAGCTATTAAGTCAAAACTTTGAGAAGACTTGTGCTTGTGGGAGTTTCTGGAACAGAACTTCTCTTTTTGGTAGTGGGAACTTGTCATCGGCCAAGAAATGGTTGAGAGGCTGGTAGTTGATGACTAGTCTTAATTTTCCTCGTACTTGTTTTGCTTTTTTGTTGACATAGAATGCTT

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Caulimovirus_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

673

Start:

10758395  

End:

10759067

Strand:

+

>scaffold_6_LTR-Caulimovirus_49

CCATGGGCATGTGAAGCATTCTATGTCAACAAAAGAGCAGAACAAGTACGAGGAAAATTAAGACTAGTCATCAACTACCAGCTTGTTAACCATTTCTTGGTCGATGACAAGTTCCCACTACCAAAAAGAAAAGTTTTGTTCCAGAAACTCCCACAAGCACAAGTCTTCTCAAAGTTTGACTTAAAAGCTGGTTTTTAGCAGCTCGGGATTAAACCTGAAGATAGACCAAAAACAGGTTTCAGCGTATCAGACCGGCACTATCATTGAAAAGACATGCCTTTTGGATTAAAGGTAGCCCCTTCTTTATTCCAGAAAGCCATGATAAAGATATTTGAGCCAATCCTTCCAAACGCGCTAGTCTACATCGACGACATACAACTATTCTCACTAGACATTGATTCCCACACTGTCCTATTAACGAAGTTCCATGACATTGTGCAACAATATGGGATCATGCTCTCGGAGAAGAAAATGGTGATCGGAGATACAGAAATCGACTTTTTGGGTATGCACATTTCGAAGGGGAAATATCATCTCGAGCCCCACATTGCAACTCAACTTGACGAATTTCCAGATGAAAAGTTAACATTCAAGAAAGTTCAGCAATTCCTAGGAATTGTCAATTACATGGCGGATTTCATCCACGGTTTCGCAAAACACAGAGAAGTTCTCT

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Caulimovirus_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

275

Start:

10759220  

End:

10759494

Strand:

+

>scaffold_6_LTR-Caulimovirus_50

GGCATATATGCGGATACAAGAGTGGCGCTTTCAAAGACAGTGAAAGGCATTACCATTCGACATACAAAGAGATTCTCGCAGTAAAAAGAGGAATTGAAACATTCGAGTTCCATCTAGTTGGTCAACATTTTCTCATCGAGATGGATATGTCATCTTTCCCAAAGATAATACAGTTTAAACAGAAAGTCCGCCCACAGTCACAATTAATCCGATAGGCAAGATTGTTCTCACAATGAAAGTTTGACGTCAACCATATAACAGGAAAAGACAACTTT

Capsella rubella (v1.1)

ID:

scaffold_6_LTR-Caulimovirus_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

10856742  

End:

10857073

Strand:

-

>scaffold_6_LTR-Caulimovirus_51

AGATCCATAGCATGATTCTGGACTCTATACGCCATTTGGTGGTGCAGGGTTGCTGCATACGTGTTTCCGATTTGTGGAGCGCCAGTAATTTGTAGCTGGATCTGCATGTTCTGACAGATTTGTGGGTCTTCTAGAGCCACATTAAAGTTTGGGAAAAGAGTCACGAAGACAGTGCCAGCATTTAGCGTCGTCTGGATAGTTGCTATGCATGCATGTTGGTACTCTCTGTATCTGGTGTCGAGGAGAGCGACTCTTGCTACAACCGGTAAGCCTTTTCTACCATGAAGGGTTAAGGCTAGGCGGATGGCTCCATAGTGGAGGTGTGTATAGCC

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Caulimovirus_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

236

Start:

3831309  

End:

3831544

Strand:

+

>scaffold_8_LTR-Caulimovirus_52

TTCATATCTCTGCCTTTCAAGAAGAATGAAGATATCAACCCTACCAAGGCTAGTCACCCAGGAATGAATCCAGACCATTACAATCTTGCGATTGAAGAAGTTGAGCAGCTACAGAAAGAAGACCTCATCGAAAAAACTGATTCACCGTGGGCTTGTGAATCTTTTTATGTCAACAAGAGAGCAGAACAAGTACGAGGCATGCTAAGACTAGTCATCAACTACCAGCCTCTCAACCA

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Caulimovirus_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

292

Start:

3832433  

End:

3832724

Strand:

+

>scaffold_8_LTR-Caulimovirus_53

TACTTTTGGAGGAAGATGAAAAAGGAAAGAGACATATATGCGGATATAAGAGTGGCGCCTTCAAAGAGAGTGAAAGACATTACCATTCGACCTACAAAGAGATTCTTGCAGTGAAAAGAGGAATTGAAAAGTTCGAGTTTCATCTAGTAGGCCAACATTTTCTTATCGAGATGGATATGTCCTCTTTCCAGAAGATGATACAGTTCAAACAGAAAGTCATTCCGCAATCTCAATTACTAAGATGGGCAAGTTGGTTCTCACAGTGGAAGTTTGATGTCAATCATATAAAAGG

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Caulimovirus_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

3834521  

End:

3834852

Strand:

-

>scaffold_8_LTR-Caulimovirus_54

CCTTTTATATGATTGACATCAAACTTCCACTGTGAGAACCAACTTGCCCATCTGAGTAATTGAGATTGCGGAAGGACTTTCTGTTTGAACTGTATCATCTTCGGGAAAGAGGACATATCCATCTCGATAAGAAAATGTTGGCCTACTAGATGAAACTCGAACTTTTCAATTCCTCTTTTCACTGCAAGAATCTCTTTGTAGGTCGAATGGTAATGTCTTTCACTCTCTTTGAAGGCGCCACTCTTATATCCGCATATATGTCTCTTTCCTTTTTCATCTTCCTCCAAAAGTACTGCTCCCCAATAGCAGTCACTAGCATCTGTTTGTAGAAT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Caulimovirus_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

883

Start:

3835000  

End:

3835882

Strand:

-

>scaffold_8_LTR-Caulimovirus_55

GTGGATGAAATCCGCCATATAGTTGACAATGCCTAAGAATTGCTGAACTTGCTTGAATGTTAACTTTTCATCAGGAAATTCGTCAAGTTGAGTTGCAATATGCGGCTGGAGATGATATTCTCCCTCTGAAATGTGCATACCCAAAAAGTCGATTTCTGTTTCTCCAATGACCATTTTCTTCTCTGAGAGCATGATTCCATATTATTGCACAATGTCATGGAACTTCGTTAATAGGACGGTGTGGGAATCAATATCTGGAGAGAACAGTAGTATGTCGTCGATGTAGACCAGCGCATTCGAGAGGATTGGCTCAAAGATCTTTATCATGGCTTTCTGGAATAGAGAAGGAGCTACCTTTAATCCAAAAGGCATGACTTTCCAGTGATAGTGCCGGTCTGGTACACAAAAACCTGTCTTCGGTCTATCTTCATGTTTAATTCCCAGTTGCCAGAAACCAGCTTTTAAGTCAAACTTTGAGAAGATTTGTGTTTGTGGGAGTTTTTGGAACAGAACTTCCCTCTTTGGCAGTGGGAACTTGTCATCGGCCAAGAAATGGTTGAGAGGCTGGTAGTTGATGACTAGTCTTAGCTTGCCTCGTACTTGTTCCGCTCTCTTGTTGACATAAAAAGCTTCACAAGCCCACGGTGAATCAGTTTTTTCGATGAGGTCTTCTTTCTGTAGCTGCTCAACTTCTTCAATCGCAAGATTGTAATGGTCTGGATTCATTCCTGGGTGACTAGCCTTGGTAGGGTTGATATCTTCATTCTTCTTGAAAGGCAGAGATATGAAAAACTCTGGATTCTTCCACAATGGTGTTGAGCATTTTGTGAGAAACTCTGAATGAGAGGCGGCACAAGAGGTTTTAGCAATTTCTTCCTTGATT

Capsella rubella (v1.1)

ID:

scaffold_8_LTR-Caulimovirus_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

476

Start:

3838763  

End:

3839238

Strand:

-

>scaffold_8_LTR-Caulimovirus_56

TTTTCATAGTTTGTCACCCATGATTCTGGAAGTAGCTTGACTAATTCGCTTCTTGGGATTTGTCTTGGAATGTGAATGCATGATGGACTATGTTGTGACTCAAGTTGGATGAGCAAAGCGTCTTCAGTTTCACGTGGAAGACTTAGATCCATAGCATGATTCTGGACTCTATACGCCATTTGGTGGTGCAGGGTTGCTGCATACGTGTTTCCGATTTGTGGAGCGCCAGTAATTTGTAGCTGGATCTGCATGTTCTGACAGATTTGTGGGTCTTCTAGAGCCACATTAAAGTTTGGGAAAAGAGTCACGAAGACAGTGCCAGCATTTAGCGTCGTCTGGATAGTTGCTATGCATGCATGTTGGTACTCTCTGTATCTGGTGTCGAGGAGAGCGACTCTTGCTACAACCGGTAAGCCTTTTCTACCATGAAGGGTTAAGGCTAGGCGGATGGCTCCATAGTGGAGGTGTGTATAGCC

Capsella rubella (v1.1)

ID:

scaffold_948_LTR-Caulimovirus_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

224

Start:

1382  

End:

1605

Strand:

+

>scaffold_948_LTR-Caulimovirus_57

ATTCTACAAACAGATGCTAGTGACTGCTATTGGGGAGCAGTACTTTTGGAGGAAGATGAAAAAGGAAAGAGACATATATGCGGATATAAGAGTGGCGCCTTCAAAGAGAGTGAAAGACATTACCATTCGACCTACAAAGAGATTCTTGCAGTGAAAAGAGGAATTGAAAAGTTCGAGTTTCATCTAGTAGGCCAACATTTTCTTATCGAGATGGATATGTCCTC

Capsella rubella (v1.1)

ID:

scaffold_95_LTR-Caulimovirus_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

19652  

End:

19983

Strand:

+

>scaffold_95_LTR-Caulimovirus_58

GGCTATACACACCTCCACTATGGAGCCATCCGCCTAGCCTTAACCCTTCATGGTAGAAAAGGCTTACCGGTTGTAGCAAGAGTCGCTCTCCTCGACACCAGATACAGAGAGTACCAACATGCATGCATAGCAACTATCCAGACGACGCTAAATGTTGGCACTGTGTTCGTGACTCTTTTCCCAAACTTTAACGTGGCTCTAGAAGACCCACAAATCTGTCAGAACATGCAGATCCAGCTACAAATTACTGGCGCTCCACAAATCGGAAACACGTATGCAGCAACCCTGCACCACCAAATGGCGTATAGAGTCCAGAATCATGCTATGGATCT

Capsella rubella (v1.1)

ID:

scaffold_18_LTR-Caulimovirus_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

593

Start:

62025  

End:

62617

Strand:

-

>scaffold_18_LTR-Caulimovirus_59

AGAAAGATGGCGATCCAAATACACTTGGGTCTTGAGAAAAAGAAAGGGGTTGTGATTGGGCTGCGTAAGATGGTGTATATATAGGGTACGGTGTAAAAGTTCATAAGGCATTTGGGCTTGTGTTTGTGGTTGATTTTGTAAAGAGTTTTGTTGGGCTTTAAGGGTTTAAGGCATTTGGGCCATAAGGGGAGAGTTTATGGAGACAGTAGTAGCCAACTGGAGGAGTTCTTGACGGATGGAGGACATCTTTTTAGTTATTTCCTTTATAGAAAGTTCCAAAATGGTTACCTTTTTCTCCATCTAGCTCAAGAAATTGTTTTGAGTTGCAGCATTTTCTGATTGCTAGTTCAAAGTTGCTTCGGCCGCACTCACTTGCGTCACTGTTCCATCAGGGTTCTTAATGTTGGGATTCTTGATTTTCCACGAGTGTTTGAAACTGTCTTCTTCAAACTCGTTTGATGGAAATGGTGACTAGGATGGAGGGCCAAACATGTAACTCAGTGGTAGTTCTTCCCTGTCCAGGGTTGCTGGGATTGAGCTATTCAAATACAAAACATAGTAATCGAATTTTCCACTAGTTGGCTCTCCATGAA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

99

Start:

2112948  

End:

2113046

Strand:

+

>scaffold_2_LTR-Caulimovirus_60

TACAAAATCAGCCACAAACACAACCTCAAATGTCTTATGACCTTTTTACACTTTATCCTATATATATCCCATCCTACGCAGCCCAATCACAACCCCTTT