ID Class Order Superfamily Length Start End Strand View
scaffold_17_LTR-Caulimovirus_21 RetrotransposonsLTRLTR-Caulimovirus317219207219523+
scaffold_17_LTR-Caulimovirus_22 RetrotransposonsLTRLTR-Caulimovirus163232456232618+
scaffold_17_LTR-Caulimovirus_23 RetrotransposonsLTRLTR-Caulimovirus3075232772235846+
scaffold_17_LTR-Caulimovirus_24 RetrotransposonsLTRLTR-Caulimovirus110236444236553+
scaffold_17_LTR-Caulimovirus_25 RetrotransposonsLTRLTR-Caulimovirus384236745237128+
scaffold_17_LTR-Caulimovirus_26 RetrotransposonsLTRLTR-Caulimovirus1216237229238444+
scaffold_17_LTR-Caulimovirus_27 RetrotransposonsLTRLTR-Caulimovirus119238444238562+
scaffold_17_LTR-Caulimovirus_28 RetrotransposonsLTRLTR-Caulimovirus831238808239638+
scaffold_2_LTR-Caulimovirus_29 RetrotransposonsLTRLTR-Caulimovirus20946662254666433+
scaffold_2_LTR-Caulimovirus_30 RetrotransposonsLTRLTR-Caulimovirus33246710324671363+
scaffold_2_LTR-Caulimovirus_31 RetrotransposonsLTRLTR-Caulimovirus53446744064674939+
scaffold_2_LTR-Caulimovirus_32 RetrotransposonsLTRLTR-Caulimovirus34546762824676626-
scaffold_2_LTR-Caulimovirus_33 RetrotransposonsLTRLTR-Caulimovirus85846767744677631-
scaffold_2_LTR-Caulimovirus_34 RetrotransposonsLTRLTR-Caulimovirus33246817934682124-
scaffold_2_LTR-Caulimovirus_35 RetrotransposonsLTRLTR-Caulimovirus52160573066057826+
scaffold_2_LTR-Caulimovirus_36 RetrotransposonsLTRLTR-Caulimovirus23060604516060680+
scaffold_3_LTR-Caulimovirus_37 RetrotransposonsLTRLTR-Caulimovirus33278996997900030+
scaffold_3_LTR-Caulimovirus_38 RetrotransposonsLTRLTR-Caulimovirus10779033117903417+
scaffold_3_LTR-Caulimovirus_39 RetrotransposonsLTRLTR-Caulimovirus22479037147903937+
scaffold_3_LTR-Caulimovirus_40 RetrotransposonsLTRLTR-Caulimovirus48379065397907021+

< 1 2 3 4 > Total 4


Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

317

Start:

219207  

End:

219523

Strand:

+

>scaffold_17_LTR-Caulimovirus_21

CTCTCCTTTGACTTCCATTGCCCCAAGACAATACCAGGATGGTTCTATGAATGGTGGTACTGGTTCGGCCCCTCCGATGACATATATCCACCTCAAATACCCAAAGTTTCAATACCCTATTATACCAAATACGAAAAACACCAACTGATCGGCCCTTTACCTAAGATAGCTTTCCACATCGACATGGGAATACCCTGGATTCTATCATGGCATTACAACCTTATACCATTCCTACCCGACATGCCTTACTCACTACTACGAGAATTTAGGATCAAATGGTGGGACAAATACAACATGGAACGATGCTCCTTAACCAA

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

163

Start:

232456  

End:

232618

Strand:

+

>scaffold_17_LTR-Caulimovirus_22

AGACAAGTAATAGTTACACCTTTTAGAACCGGAGCAAATAGAGATGATAGAGAATCAATAAATATGGCTGACATTAAAATAGTATATGAACAAAATAATTACCAAAGTCAAATACTACATACTATCTCACGGCAAATTGATCATATAGATAACAAATTAGATA

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3075

Start:

232772  

End:

235846

Strand:

+

>scaffold_17_LTR-Caulimovirus_23

CCTTTTCAAGAAGCGTTGATAGCATAGGTGTTCCACGCTGTAAGTCCCGAAGGCAGTGAGTCCGTTGGTAAGCCCGTGCATCACCCGTCGTCGATAAGATCGGTTAGTTTGCATTTTAGCATGAGTTTAAGAATATTTTAGACATGGCATCTACGGTTAGAAAGTTGTTTAAGTCTAAACATGCATCATCCTCTACATCTCAAAAAACAATTAATTCAAGAGAAATCATGTCAAAAATTACAACTTTTAATCAAGAAATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAAACTATAAAAGAAAGAAATTTAATTATATTCATTTCGGTCTAATACAAATAGCAATAAAACCTTTATCCAGAACAGGGATAGATTCTCCAATACTTATGTTATTAAGAGATAAAACTCTTTTAAAGTTTAAGGACTCCTTGTTAGGAGCTGTACAATCAAACTTATGTAACGGAGCTATATACTTTAATTGTGCTCCAAACTTTCAAGTAAGTTTACATGACCCAACAATATTCAATACTTTAGTTTTAAACGTACACTTGCCTGAAATTAAATTTCAGCAAGAAAGACACGGTTATTTATTGTTGTATCGAATTTACTTTAAGCAATCTACATCTGAGTTTAATCCTCGATGTTTGTTGCAAGATGATAAAGGCGAAACAACAATATTAGCTGTACATAGTAAATATACTCCAACCTCTACATATACACCCAAACAATTAAAATGGACAGAAATAACAATCCCTGATCAATGGAAAATTAATATTACTCAACCACCATGAAACTTTGAACAAAGAACTCTTACAAGTATAACAGAACAATACGATGGAAAAGTATTATTAAAATTTGGTTCTTTCAGAGATTCACCATCATTAAAAATAAGCTCTTTTTACCCACGTTCATCTTTCTCTGACTATAGAACTCGCCAAGATAGTACTGAATCCGAAGAAAGTATAGAACAAATTTTAACAAAAAACCAAGAGAAAAAACCTATTAACTTTCAAGCACCAATAGCTGAACCAATTCAACCATCAGAGGCAGGATCGTCTAACTTTCCTACTTCTCCAACTCCTTCAGATTTTAAATCAATAAATGTTATTTCGAAAGTATTTACGAAAGATAAGCACTATCTTAAAGAAGAATTTTTATCACATCAAAATAGAGATAAAAGAAAATGGTACTTTGAAACTTTTACTAAAGAAAAACTTACAAGTTTTAGAGAAATATGATATAGTTACATGGAAATTATAGACATAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTAATGGGGAAACACATAAATCAGTCCATCCACCGTTAAAGGATATAAAAATTCACACTCCTCAAAGACAAGTAATAGCTACACCTTTTAGAACCGGAGCAAATAGAGATGATAGAGATTCAATAAATATGGCTGACATTAAAATAGTATATGAACAAAATAATTACCAAAGTCAAATACTACATACTATCTCACGGCAAATTGATCATATAGATAACAAATTAGATAAAGACGAAAATGTTTTATTAACAAACTATCAACCATTGTTACCACCTTTTAACACAATATCACCACCCCCTCTTTAAACCATTTACTAAACCCATCAAATTCCCAGAAAAAGAAATTTTAAAATCAATTTCAAGTAGACTAGATAGACTAGACAAAGGTAAGGGTATAAACAATATTGATGAAAACATTCAGTCTGAAACTGATATAGAAATAAATCGAATAAAAAGAAACTTCCAGCAATCCAAAAAACCATATTATCAAAGACACTCTCCACCCGACCTATTATTTGAAGAGCATAATAAATTTCCCTCCAAAAACTTTTATAACGGGGAAGGGATATATGAATGGAACATAGATGGAAGGTCCGAATATGAAATGATGAACTTATTTCAAGAAATGGGAATGGCTACGTTAGCTTATAAATCTAAAGGAATGTCAGATAAACAAGCATGTCTACTTTTAATCTCAGGGTTTAATGGTGCCTTAAAATTTTGGTGGGATAATGCCTTAGATATAACATCACAAGATTCTATTATAAACCACACTGAAACTAGAAGAGTAGAAGGGGATGATGGTTTTTATGAAGAAGAACAAGTTCAAAACGCTGTAGAAGTATTATTTCATACCATCACCATGCATTTCGTAGGAAATCCTTCTGAAGAACTTACAAGTAAAAAACTTATTTTAACAAACCTTCGATGTCCAACACTAGGAGACTTTAAATGGTATAAAGACATATTTATAACAAACATATTTCAAAGAAACGACTGCAACCAACCCTTCTGGAAAGAAAGGTTCATTGCAGGATTACCTTCGTTCTTTGCAGAACGATTAATTAGTAAACTAAAAGATTTTTCTGGCGGACAACCGGTACCTTGGGATACGATAACCTATGGTCAGTTTTTTGCTTTTGTTAAAAAAGAAGGATTACAAATATGTCAAGAACATAAAGATAAACAAAAAACTAATAAATTTAAATTCGGTGAAACTATGGGCTCATTTTGCGAGCAATATGGTTATCATCGTCTCACTCCACCATCTAGACAAAGACAAAAAACACGTAAACAAAATAAGTCATTTTACCCACAACCTTACAATAAAAGGAAAAGATTTTCAAAAAGATTTTCTAACTCGTACTATACAAAAAATAAAAATCCAAAACAACCAAATAAAAAAGAAAAAATTATATGTTGGAACTGTAAATGACCAGGACATAAATCTACTGATTGCAAAATGAAAAGAAAAATTAATGAAATATTCCACGATCAACAAGACATTGAAGAAAAATTAGAAAAGTTACTTCTTTCGGAAACAGAAAATTCAGAAGAACTTAGTAGCGAT

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

110

Start:

236444  

End:

236553

Strand:

+

>scaffold_17_LTR-Caulimovirus_24

GTCTTAATAGAATAATAGAAAAGTATCCTTCCCCAACACTATTTAAACAAGTAACTACCGGTGAATTACAAGGAGAAGTAAAAAATTTAAAAGCACAAATAAAAGAATTA

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

384

Start:

236745  

End:

237128

Strand:

+

>scaffold_17_LTR-Caulimovirus_25

ATGAACCCTCCACAAGCAACCCTGATAAACATGAGAAAACAGAAGAAGAAGAATATATCCAAATAATAAATAAAATAAACTATCAAAAATGGTATACGAAAATAACAATACACATTGGGTATGATTTTAAACTAGAAACCATAGCACTTTTAGATACAGGAGCTGATTATAACTGTATTAGAGAAGGAATAATTCCTACAAAATTCTACAAGAAAACATACGAAAAACTTAGTGGTGCAAACGGAAGCAGTTTAAAGGTCAATTATAAATTACCTAAAGCAAAAACTTGTAATAAAAACTATTGCTTTAAAACACAATTTATCCTTGTAAAAAATTTAAGTCAAGAAGTTATACTAGGAACTCCATTTTTTACACAAATTTATC

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1216

Start:

237229  

End:

238444

Strand:

+

>scaffold_17_LTR-Caulimovirus_26

CTATCACCTATGAAAACAAAAGAAATTTTAGCTTTACAGAATTCCACAATAGAAAAATCTATAAACTTAATAGATAGAAAACAGAAACATATTCTATACTTACAACAAGAAATAAAATACCAACAAATAGAACAACAATTACATGATCCACAAATAATAAATAAAATAAAAAAATTAGAAACTGAACTTTTAGCCCAAGTATGCTCTGAACTTCCAAATGCATTCTGGGAAAGGAAAAAACATATTGTTGAAATACCCTACGAAAAAGACTTCAACGAAAAGCATATTCCAACTAAAGCTAGGCCCATTCAAATGAACCAAGAACTATTAGAACATTGCAAAAAAGAAATACAAGAATTGCTTGATAAAAATTTAATAAGAAAATCTAAATCTCCTTGGAGTTGTTCAGCATTCTATGTGAACAACCAAGCTGAAAAAGAAAGAGGAGTACCTCGCTTAGTAATCAATTATAAACCCTTAAACAATGTAATACAATGGATAAGATACCCAATACCCAATAAAAGAGATCTACTAAAAAGATTATATGAGGCCTGTATATTTTCAAAATTCGATATGAAAAGTGGATTTTGGCAAATACAAATTGCCGAAAAGGATATATACAAGACAGCATTCACAGTGCCTTTTGGGCATTACGAATGGAACGTCATGCCTTTCGGCTTAAAAATGCACCTTCAGAATTCCAAAACATTATGAATGAAATTTTTAACCCTTACACAACTTTTTCTATCGTATATATAGATGATGTTTTAATATTTTCCAAATCTATTGACCAACACTTTAAACACTTATACACCTTTTTAAACATTGTTAAAAAGCATGGACTAGTAGTATCAGCCAAAAAAATGCAAATATTTCAAACAAAAATACGATTTTTAGGCCATAATATTTATCAAGGAACTATAACACCAATATCTAGATCAATAGAATTTGTAAGCAAATTTCCAGATGAAATCAAAGAGAAAACCCAATTACAAAGATTTTTAGGGTGTTTAAACTATATATCAGATTTTCTACCAAACCTTAGAAAAACAATTCAACCACTATTTCAAAGATTGCAAAAATATCCCATACCATGGTCTAGTCTGCATACTAGTCTAGTTCGTGACATTAAGAAGAAAGTTACAACACTACCATGTCTAGTCATCCCACACCCTAATGCATTCATGATAGTTGAGACAGATGCATCAGAAATAGG

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

119

Start:

238444  

End:

238562

Strand:

+

>scaffold_17_LTR-Caulimovirus_27

GTTAAAAAAGAAGTTTCATCTATAGTAAACTGTATTTCTAAATTTCAAGATGATTTAATAAACAAAAAGTTTTTACTACGTGTCGACTGTAAGTCAGCTAAAGAGATTTTACAAAAAGA

Capsella rubella (v1.1)

ID:

scaffold_17_LTR-Caulimovirus_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

831

Start:

238808  

End:

239638

Strand:

+

>scaffold_17_LTR-Caulimovirus_28

CTCTGCTTTAGCAGAATTCCCTCCTTTATCTTATGCAAAAGCTGTCAACCCCCAACCACAAAAAATATCAACACCATCCTCCTCTCAAAAAACCTCAGATCAAAAATCATCATACTTCCTAAAACCACAACGCCAACATCTTATTACAACCTCATTTACTAAACCAATATCTCTCAAAGACCTTACCCAATATACCAACTGTATTTTTTACGAGGATAGTCAATACCTTACCGACAACCTTACCAAAAACCGTACATTCTACGAATTCATTCTCGTAGATACAAAGTCAGTTGAAATAACCCACCATACCGACAAAAATAACCCAAACCTCATCTCCTACTCCACTTGCAAAATACTCAAAATATGCAACCCCCAAGATCTCGGCTTTATTAACCTCCACACATCAAAAGATTTCTCTATACCAGGTTACCATATACCAAGATTTACCTACATAGATTACCAAAAAGCCTTTCTCCATACCTTTTACCTACGAACCTATGATCACTCCTGGTTCCTCTCCTTTGACTTCCATTGCCCCAAGACAATACCAGGATGGTTCTATGAATGGTGATACTGGTTCGGCCCCTCCGATGACATATATCCACCTCAAATACCCAAAGTTTCAATACCCTATTATACCAAATACGAAAAACACCAACTGATCGGCCCTTTACCCAAGATAGCTTTCTACATCGACATGGGAATACCCTGGATTCTATCATGGCATTACAACCTTATACCATTCCTACCCGACATGCCTTACTCACTAGTACGAAAATTTAGGATCAAATGGTGGGACAAATACAACATGGAACGATGCTCCTTAACCAA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

209

Start:

4666225  

End:

4666433

Strand:

+

>scaffold_2_LTR-Caulimovirus_29

GGCTACACCCATCTGCACTATGGAGCAATACGCCTAGCGTTACCTCTTCATGGAAGAAAAGGCTTACCAATAGTATCAAGAGTCGTTCACCTCGACACCAAATATAAAGAATACCAACATGCTTGCATCGCAACCATCCAGACGACATTAAATTTGGCACTATCTTCATGACTCTTTTTCCAAACTTTAATGTGGCACTAGAAGATCCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

4671032  

End:

4671363

Strand:

+

>scaffold_2_LTR-Caulimovirus_30

GGCTATACACACCTCCACTATGGAGCAATACGCCAAGCCTTAACCCTTCATGGTAGAAAAGGCTTACCGGTAGTGGCAAGAGTCGCTCTCCTCGACACCAGATACAAAGAATACCAACATGCTTGCATCGCAACTATCCATACGACGTTAAATGCTGGCACTATCTTCGTGACTCTTTTCCCAAACTTTAACGTGGCTTTCGAAGACCCACAAATCTGTCAGAACATGCAGATCCAACTTCAGATTATCGGTGCTCCACAAATTGGAAACACGTATGCAGCAACCTTGCACCACCAAATGGCGTATAGAGTCCAGAATCATGTTATGGATCT

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

534

Start:

4674406  

End:

4674939

Strand:

+

>scaffold_2_LTR-Caulimovirus_31

TCTTGTGCCGCCTCTCATTCGAAGTTTCTCACAAAATGCTCAACACCATTGTGGAAGAATCCGGAGTCTTTCATATCTCTACCTTTCAAGAAGAATGAAGATATCAACCCTACCAAGGCTAGCCATCCAAGAATGAATCCAGACCATTACAATCTTGTGATTGAAGAAGTTGATCAGCTACAGAAAGAAGATCTCATTGAAAAAACTGATTCACCGTGGGCTTGTGAAGCTTTATATGTCAACAAGAGAGCTGAACAAGTATGAGGCAAGCTAAGACTAGTCATCAACTACCAGCCTCTCAACCATTTCTTGGCCGATGACAAGTTCCCACTACCAAAAAGAGAAGTTTTGTTCCAGAACCTCCCACAAGCACAAGTCTTTTCAAAGTTTGACTTAAAAGGTGGTTTTTGGCAACTAGGAATTAAACCTGAAGATCGACCGAAGACAGGTTTATGTGTACCAGACCGGCACTATCATTGGAAAGTCATGCCTTTTGGATTAAAGGTAGCTCCTTCTCTATTCCAGAAAGCCATG

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

345

Start:

4676282  

End:

4676626

Strand:

-

>scaffold_2_LTR-Caulimovirus_32

AAAGTTGTCTTTTCCTTTTATATGATTGACATCAAACTTCCACTGTGAGAACCAACTTGCCCATCGGAGTAATTGTGACCGTTGAAGGATCTTCTGTTTGAACTGTATCATCTTCGGGAAAGAGGTCATGTCCATCTCGATGAGAAAATGTTGACCAACTAGATGAAACTCGAATTTTTCAATTCCTCTTTTTATTGCAAGGATCTCTTTGTCGGTCGAATGGTAATGCCTTTCACTGTCTTTGAAAGCGCCACTCTTGTATCCGCATATATGTCTCTTTCTTTTTTCATCTTCTTCTAAGAGTACTGCTCCCCAATAACAGTCGCTAGCATCTGTTTGCATAAT

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

858

Start:

4676774  

End:

4677631

Strand:

-

>scaffold_2_LTR-Caulimovirus_33

GTGGATGAAATCCGCCATGTAATTGACAATGCCTAGAAATTGCTGAACTTGCTTGAATCTTATCTTTTCATCAGGAGATTCGTCAAGCTGAGTTGCAATATGAGGCTGGAGATGATATTCTCCCTTTGAAATGTGCATACCCAAAAAGTCGATCTCTGTTTCTCCAATAACCATTTTTTTCTATGAGAGCATGATCCCTTATTGTTGCACAATATCATGGAACTTTGTTAATAGGACGGTGTAGGAATTGATGTCCGGAGAAAACAGTAGTATGTTGTCGATGTAAACCAGCACATTCGGGAGGATTGGCTCAAAGATCTTTATAGTGGCTTTCTGGAATAGAGAAGGAGCTACCTTTAATCCAAAAGGCATGACTTTCCAATGATAGTGCCGGTCTAGTACACAGAAACCTGTCTTCGGTCTATCTTCAGGGTTAATTCCCAGTTGCCAAAAACCAGCTTTTAAGTCCAACTTTGAGAAGACTTGTGCTTATGGGAGTTTCGGGAACAGAACTTCTCTCTTTGGTAGTGGGAACTTGTCATCAACCAAGAAATGGTTAAGAGGCTGGTAGTTGATGACTGGTCATAGCTTGCCTCGTACTTGTTCAGCTCTCTTGTTGACATAAAAAGCTTCACAAGCCCACGATGAATCAATTTTTTTGATGAGATCTTCTTTCTGTAGCTGATCAACTTCTTCAATTGCAAGATTGTAATGGTCTGGATTCATTCTTGGATGGCTAGCCTTGGTAGGGTTGATATCTTCATTCTTCTTGAAAGGTAGAGATATGAAAAACTCTGGATTCTTCCACAATGGTGTTGAGCATTTTGTAAGTAACTCAGAATGAGAGGCGGCACAAGA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

4681793  

End:

4682124

Strand:

-

>scaffold_2_LTR-Caulimovirus_34

AGATCAATTGCATGATTCTGGACACTATACGCTATTTGATGATGTAATGTCACTGCATATGGTTTTCTGATTTGTGGGGAACCGGTAATCTGAAGTTGGATCTACATGTTTCGACAAATTAGTGGATCTTTTAGTGCCACATCAAAGTTTGGAAAAAGAGTCACGAAGATAGTGCCAACATTTAATGTCGTCTGGATGGTTGCGATGCAAGCATGTTGGTACTCTTTATATCTGGTGTCGACGAGAGCGACTCTTGCTACTACGGGTAAGCTTTTTCTTCCATGAAGGGTTAACGCTAGGCGTATTGCTCCATAATGCAGATGAGTGTAGCC

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

521

Start:

6057306  

End:

6057826

Strand:

+

>scaffold_2_LTR-Caulimovirus_35

TGGCAAAACCTTGGCTACACACATCTGCGTTATGGAGCAATACGCTAGCGTTAACTCTTCATGGAAGAAAAGGCTTACCGGTAGTAACAAGAGTCGCTCTCCTCGATACCATATATAAAAAGAGTACCAATATGCTTGCATCGCAACCATTCAGATGACATTAAATGCTGTCACTATCTTTGAGACTCTTTTTCCAAACTTTAAAGTGGCACTAGAAGATCCAAAAATTTGTCGAAACATGCAGATCAAACTTCAGATTACTGGCGCTGCACAAATTGGAAACATGTATGCAGCGACACCGCATCATCAAATGACATATAGAGTCCAAAATCATGCAATGGATTTTAAGTCTCCCTCGAGACACTGAAGATGCCTTACTCATTAAACTTGAGTCACAACATATTCTGTCATACATCCACATTCCAAGGCAAATCCCAAGAAGCGAATTAGTCAAGCTACTTCCGGAATCATGGGTAACTAATTATGAAAAAATCCATGAAAGAAGTACACCAATACAATCA

Capsella rubella (v1.1)

ID:

scaffold_2_LTR-Caulimovirus_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

230

Start:

6060451  

End:

6060680

Strand:

+

>scaffold_2_LTR-Caulimovirus_36

TATGGAAGAATCCAAAGTTCTTTATACCTTCACCTTTCAAGAAAAACAAAGATATCAACCCTACCAAGGCTAGTCATCCAGGAATGAATCCATACCATTACAACCTTGCTATCGAAGAAGTTTATTAGCTACAGAAAGAAGATGTCATTGAAAAGACCGATCCACCATGGGCATGTGAAGCATTTTATGTCAACAAAAGAGCAGAACAAGTGCGTGGAAAGCTAGGACTA

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Caulimovirus_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

332

Start:

7899699  

End:

7900030

Strand:

+

>scaffold_3_LTR-Caulimovirus_37

GGCTATACACACCTCCACTATGGAGCCATCCGCCTAGCCTTAACCCTTCATGGTAGAAAAGGCTTACCGGTTGTAGCAAGAGTCGCTCTCCTCGACACCAGATACAGAGAGTACCAACATGCATGCATAGCAACTATCCAGACGACGCTAAATGCTGGCACTGTGTTCGTGACTCTTTTCCCAAACTTTAACGTGGCTCTAGAAGACCCACAAATCTGTCAGAACATGCAGATCCAGCTACAAATTACTGGCGCTCCACAAATCGGAAACACGTATGCAGCAACCCTGCACCACCAAATGGCGTATAGAGTCCAGAATCATGCTATGGATCT

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Caulimovirus_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

107

Start:

7903311  

End:

7903417

Strand:

+

>scaffold_3_LTR-Caulimovirus_38

TTTTATGTCAACAAGAGAGCAGAACAAGTACGAGGCAAGCTAAGACTAGTCATCAACTACCAGCCTCTCAACCATTTCTTGGCCGATGACAAGTTCCCACTGCCAAA

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Caulimovirus_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

224

Start:

7903714  

End:

7903937

Strand:

+

>scaffold_3_LTR-Caulimovirus_39

AGTTCCATGACATTGTGCAACAATATGGAATCATGCTCTCAGAGAAGAAAATGGTCATTGGAGAAACAGAAATCGACTTTTTGGGTATGCACATTTCAGAGGGAGAATATCATCTCCAGCCGCATATTGCAACTCAACTTGACGAATTTCCTGATGAAAAGTTAACATTCAAGCAAGTTCAGCAATTCCTAGGCATTGTCAACTATATGGCGGATTTCATCCAC

Capsella rubella (v1.1)

ID:

scaffold_3_LTR-Caulimovirus_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

483

Start:

7906539  

End:

7907021

Strand:

+

>scaffold_3_LTR-Caulimovirus_40

GGCTATACACACCTCCACTATGGAGCCATCCGCCTAGCCTTAACCCTTCATGGTAGAAAAGGCTTACCGGTTGTAGCAAGAGTCGCTCTCCTCGACACCAGATACAGAGAGTACCAACATGCATGCATAGCAACTATCCAGACGACGCTAAATGTTGGCACTGTGTTCGTGACTCTTTTCCCAAACTTTAACGTGGCTCTAGAAGACCCACAAATCTGTCAGAACATGCAGATCCAGCTACAAATTACTGGCGCTCCACAAATCGGAAACACGTATGCAGCAACCCTGCACCACCAAATGGCGTATAGAGTCCAGAATCATGCTATGGATCTAAGTCTTCCACGTGAAACTGAAGACGCTTTGCTCATCCAACTTGAGTCACAACATAGTCCATCATGCATTCACATTCCAAGACAAATCCCAAGAAGCGAATTAGTCAAGCTACTTCCAGAATCATGGGTGACAAACTATGAAAAACTCCAT