ID Class Order Superfamily Length Start End Strand View
Chr3_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra3551421505214215406-
Chr3_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra3561421551414215869-
Chr3_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra3311594803115948361+
Chr3_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra2161594861515948830+
Chr3_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra3491682375216824100-
Chr4_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra333714304714636-
Chr4_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra331714831715161-
Chr4_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra32828735722873899+
Chr4_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra10328739832874085+
Chr4_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra36028740882874447+
Chr4_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra34534459463446290+
Chr4_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra34036072013607540-
Chr4_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra31542058814206195+
Chr4_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra28242062484206529+
Chr4_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra33768589946859330+
Chr4_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra15469548116954964+
Chr4_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra20169581916958391+
Chr4_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra35886434318643788-
Chr4_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra35886438968644253-
Chr4_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra35998412719841629-

< 5 6 7 8 9 > Total 14


Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

14215052  

End:

14215406

Strand:

-

>Chr3_LTR-Cassandra_81

TGTAACGCCCCGACCGTCCCTACTAGTGAGTACCCACTTCCTCTCTTAGGCCCGTGGGCCCCACCCATGTCAGACGATTGGTGCATTAATTCTGAAGGCTTTAAAGACTTGTTACTATCCCTACAAATCACCACATGATCTTTCTCCATGTTTTGGTCTCACTCACACGGTATCGGGAATCATTTTCGATAGGTCACCCTTTCTAATACTACTCCAGCCTAAGCACGTTTAACTCTCAAGTTCTAACTAGAGGAGTAACGGAAAAAATAAGTGCACTTTGTGACATAGGTAGTCAAATCAAATCTCGTAACTCTCTCCACATACACTACCATATACCAAAAATCGGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

14215514  

End:

14215869

Strand:

-

>Chr3_LTR-Cassandra_82

TGTAACGCCCCGACCATCCCTACCAGTGAGCACCCACGTCCTCTCTTGGGCCCATGGGCCCCACCTGTTTGATGGTCGGTGCATCAATTTTTAAAAGACTCTAAAAACTTGTTAGTATCCCTACAAATCACCATATGATCTTTCCTCTTGTTTTGCCCTCACTCACACGGTACCAGAACTCATTTCCCGATAGGAAACTCATTATAATACTACTTCAGCCCAAGCACGCTTACCTCTGGAGTTCTAACTAGAGAAGTGACGGAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATCTTTTAATTCTCTCCACATACACTACCATATACCAGAAACCGAGATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

15948031  

End:

15948361

Strand:

+

>Chr3_LTR-Cassandra_83

TGTAACATCCCAGTTTCTAGTATATAGTGGTGCATGAGGAGAGCTTAAGATATTTGATTTGGTTACCTATATCACCAAAGTGCACTTATCTTTTCTATCATTCCTCTAGTTAGAACTTCAGAATTAAGCGTGCTTTGGCTAGAGTAGCACCAGAATGGGTGACCTATCGGAAAGTGATTCCTAGTACTGTGTGAGTGAGGTCAAAACACGGAGAAAGATCATGTGGTGATTTGTAGGGATAATAACAAGTCTTTGAAGCCTCTTAAAATTAATGCACCGGCCGTCGGACGATGGTGAGACCCACATGCCTAGAAAGGGCGTGGAGGCTCAC

Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

216

Start:

15948615  

End:

15948830

Strand:

+

>Chr3_LTR-Cassandra_84

TCCAGAGTTACGCTTGCTTGGGCTGAAGTAGCATTAGAATACGTGACCTATCGGGAAGTGATTCCCGTTACCGTGTGAGTGAGGCCAAAACACGGGGAAAAATCATGTGGTGATTTGTAGGGATAGTAACAAGTCTTTTGAGCCTCTTAAAAATTAATGCATCGGCCGTCGGACGAGGGTTAGACCCACGGGCCTAGAGAAGACGTGAAGGCTCAC

Cardamine hirsuta (v1.0)

ID:

Chr3_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

349

Start:

16823752  

End:

16824100

Strand:

-

>Chr3_LTR-Cassandra_85

TGTAACGCCCATACCGTCCCTACCAGTGAGCACCCACATCCTCTCTCGGGCATGGGCCCACCTTTATCCGACGGTCGGTCCGTTAATTTTGAAGGCTCTTAAAGACTTGTTACTATCCCTACAAATCACCACATGATCTTTCCCTGTGTTTTGGCCTCACTCACACGGTACTGAGAATCACTTCCCGATAGGTCACCCACTCTACTCCAGCCCAAGCACACTTAATTCTGAAATTCTAAGTAGAGGAGTGACGGAAATGATAAGTTCACTTTGGTGATATAGGTAACCATATAAAATCTGTTAAACCTCTCCACATACACTACCACATACCAGAAACCGGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

714304  

End:

714636

Strand:

-

>Chr4_LTR-Cassandra_86

GTGAGTCTCCATGCTCTCTTTAGGCCCGCGGGCTTCACCCTCGTTCGACGACCGGTGCATTAATTCTGAAGGCTTAAAGACTTGTTACTATCCCTACAAATCACCATATGATTTTTTTCCGTGTTTTGGCCTCACTCACACGGTACCGACAATCACTTCCCGGTAGGTCACACCCATCTTAGTACTACTCCAGCCCAAGCACGCTTAACTCTGGAGTTCTCTCAGAATAGTTGACAGAAAAGATAAATGCACTTTGGTGATATAGGTAGTCAAATCAAATCTCTTAAGCTTTCTTCATGCACCATTATATATACTAAAAACCAGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

331

Start:

714831  

End:

715161

Strand:

-

>Chr4_LTR-Cassandra_87

GTGAGCCTCCACGCCCTCTCTAGGCCAATGTGCCTCATCCTCGTCCGACGGCTGGTGTATAATTCTGAAGGTGCTAAAGACTTGTTATTATACCTACAAATCACTACATGATCTTTTCTCGTGTTTTGACCTCACTCACACGGTACCGATAATCGCTTCTCAGTATATCACCTATCTTAGTATTACTTTATCCCAAACACGCTTAACTTTGGAATTCTCTTAGAATAGTTGACAAAAAAGATAAGTGCACTTTAGTTAAATAAGTAACCAAATCAAATCTCTTAAACTCTCCTCATGCACTATTATATATACCAGAAACCAGAATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

2873572  

End:

2873899

Strand:

+

>Chr4_LTR-Cassandra_88

AATATCCCGCTTTCTGGTATATGGTAGTGTATGTGGAGAGGGTTAAGAGATTTGATTTGGCTACCTATATCACCAAAATGCACTTATCTTTTCCGTCACTCCTCTCTAGTTAGAACTCCAGAGTTAAGCATGCTTGGGCTGGAGTAGTACTAGAATGGATGACCTATCGAGAAGTGATTGTCGGTACCGTGTGTGAGGCCAAAAAACAGGGAAATATCATGTGGTGATTTCTAAGGATAGTAACAAGTCTTTACAGCCTTCAGAATTAATGCACCAGCCATCGGACGAGGGTGAGGCCCATGGGCCTAGAGAGAGCGTGGAGGCCCAC

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

103

Start:

2873983  

End:

2874085

Strand:

+

>Chr4_LTR-Cassandra_89

TGGTATCAGAGCCCTAGGTTATGTCAAACCTGTTCTCACCCGGGAGGTAGTCTTGAGGGCGGTGGGTTCAGAACGAGGACGTTGCGATCTGTTAGTGGGTGTG

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

360

Start:

2874088  

End:

2874447

Strand:

+

>Chr4_LTR-Cassandra_90

TGTAACATCCTGATTTCTGGTATATGATAGTGTATGTGGAGAGGGTTAAGAGATTTGATTTGGCAACTTATATCACCAAAGTGCACTTATCTTTTCCGTCACTCCTCTAGTTAGAACTCCAGAATTAAGTGTGCTTGGGCTGGAGTAGTACTATAATGGGTTACCTATCGGTAAGCGATTCCCAGTACCGTGTGAGTGAGGCTAAAACACGGGGAAATATCATGTGGTGATTTGTAGAGATAATAACAAGTCTTTAGAGCCTCGTAAAAAAATAACGTACAAAACGTCGGACAGGGGTAGGGCCCACGGGCCCAAGAGATGACTTGGCTGCTCATTGGTAGGGATGTTCCGGGCGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

345

Start:

3445946  

End:

3446290

Strand:

+

>Chr4_LTR-Cassandra_91

TGTAACATCGCGATTTCTGCTATATATAGTGGTGCATAAGGAGAGCTTAAGAGATTTGATTTGGCTACCTATATCACCAAAGTGCACTTATCTTTTCCGTCACTCCTCTAGTTAAAACTCCAGAGTTAAGCGTGCTTGGGCTGGAGTAGCACTAGAATGAGTGACTTATCGGGAAGTGATTTCCGGTACCGTGTGAGTGAGGCCAAAATACGGGAAAAGATCATGTGGTGATTTATAAGGATAGTAACAAGTCTTTGGAGCCTCACGACCGTCAGACAGGGGTGGGGCCCACGTGCCCGAAAGAGGACGTAGGTGCTCACTGGTAGGGACGGTCGGGGAGTAACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

340

Start:

3607201  

End:

3607540

Strand:

-

>Chr4_LTR-Cassandra_92

CTACCAGTGAGCACCCACGTCCTCTCTCGGGACCATGGGCCCCACCCCTGTCCGACGGCCGGTCCATTATTTTTTAGAGGGTCTAAAGACTTGTTATTATCCCTACAAATCACCACATGATCTTTCCCCGTGTTTTGGCCTCACTCACACGGTACCGAGAATCACTTTCCGATAGGTCACCCATTCTAGTACTACTCCAGCCCAAGCACGCTTAACTATGGAGTTCTCTCAGGATGGTTGACAGAAAAGATAAGTGCACTTTGATGATATAGGTATCCAAATCAAATCTCTTAAACTTTCCTCATGCACCACTATATATACCAGAAACCAGGATATTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

315

Start:

4205881  

End:

4206195

Strand:

+

>Chr4_LTR-Cassandra_93

TGTAACATCCTGGTTTCTAGTATAGAGTGGTGCATGAAAAGAGTTTAAAAATTTTGATTTGGTTACCTATATCACCAAAATGCTCTTATATTTTCCGTCACTCGTTTAATTAGAACTCTAGAATTAAGCATGCCTAAACTGGATTAATATTAGTGTGATTGAAGCCAAAACAAATAAAAAGATCATGTGGTGATTTTTAGGAATTAATAACAAGTCTTTCGAACCTCTTAAAATAATAGATCGGCTGTCGGAAGAGGGTTGGGCACCCAGGCCTAGAGAAGGCGTGGAGGCCCACAGGCGTAGAGAGGGTGTGGG

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

282

Start:

4206248  

End:

4206529

Strand:

+

>Chr4_LTR-Cassandra_94

GTCACAGACTGTTCTTATCTTTTCCGTCACTCGTCTAGTTAGAACTCCATAGTTAAGTGTGCTTAGGCTGGAGTAATATTAGATGGGTGACCTACTGGGAAGTGATTATCGGTATTGTAAGTGAGGCCAAAACATGGGGAAATATCAGGTGGTGATTTGTAGGAATAGTAACAAGTTTTTCGAGCCTCTTAAAATAATGCAACGGGCATCGGATGAGGGTGTGGGATCCACGGGTCTGGAAAGGGCATGGGGGCAATGGACGGAAGCGGTCGGGACGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

337

Start:

6858994  

End:

6859330

Strand:

+

>Chr4_LTR-Cassandra_95

TGTAACGTCCTGATTTCTGGTATATGGTAGTGTATGTGGAGAGGGTTAAGAGATTTGATTTGGCTATCTATGTAACCAAAGTGCACTTATCTTTTCCGTCACTCCTCTAGCTAGAACTCCAGAGTTAAGCGTGTGTGGGCTGGAGTAGCACTAGAATGGGTGATCTATCAGAAAGTGATTCCTGATACCGTGTGAGTGAGGTCAAACACGAAAAAGATTATGTGGTGATTTATAAGGATAGTAACAAGTCTTTGGAGCCTTCAGAATTAACGGACCATGGGCCGACGGACCCAAAAGAAGATGTGGGTGCTCACTGGTAGGGATGGTCGGGGCGTTA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

154

Start:

6954811  

End:

6954964

Strand:

+

>Chr4_LTR-Cassandra_96

TGTGACATCCTGATTTCTGGTATAGTGGCGCATGAGGAGATTTAAGAGATTAGATTTGGCTACTTATGTCACCAAGTGCATTTATCTTTTTATGTCACTTGTCCATTTAGAACTCCAGAGTTAAGCATGATTGGGCTGAAGTAGCATTAGGATG

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

201

Start:

6958191  

End:

6958391

Strand:

+

>Chr4_LTR-Cassandra_97

GGATGGGTGACATACAAGGAAGTGATTGTCAGTATCGTGTGAGTGAGGCCAAAACACGGAGAAATATCATGTGGTGATTTGTAGGGGATAGAAACAAGTCTTTAGAGCCTCTCGAGATAATCAACCGGCTATCGGACGAGGATGGTACCCACAGATTTAAATAGGGTATGGGTGATCACAGACNNTGGCGGTATGGACATT

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

8643431  

End:

8643788

Strand:

-

>Chr4_LTR-Cassandra_98

TGTAATGCTCCGACCGTCTCTACCATTAAGCACCCACGTCCTCTCTTCGGCCCGTGGGCCCTACTACTCTCTGACGGTTGGTGCATTAATTTTCTTCGAGGTTCTGAAGACTTGTTACTATCCCTACAAATCACCACATGATCTTTCTCTGTGTTTTGGCCTCAATCATATGGTACCGACAATCACTTCCCGGTAGGTAACCCATCCTAGTACTATTCCAGCACAAGCCACTTAACTCTGGAGTTCTCTCAGGATGGTTGATAGAAAAGATAAGTGCACTTTGGTGATATAGATAGCCAAATCAAATCTTTTAAACTCTCCTCATGCACCACTATATAACAGAAACCAGGATATTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

358

Start:

8643896  

End:

8644253

Strand:

-

>Chr4_LTR-Cassandra_99

TGTAATGCCCCGACCGTCCCTACCAGTGAGCACCCACGTCCTCTCTCGGGCCCGTGGGCCCCACCACTGTCTGATGGTCAGTGCATTAATTTTTTCGAGGCTCTAAAGACTTGTTACTATCCCTACAAATCACCACATGATCTTTCCCCGTATTTTGGCCTCACTCACACAATACCGACAATCACTTCCCGATAGGTCACCCATCCTAGTACTACTCTAGCCCAAGCACGCTTAACTCTGGAGTTCTCTCGGGATGGTTGACAGAAAAGATAAGTGCACTTTGGTGATATAAGTAGCCAAATCAAATCTTTTAAACTCTCCTCATGCACCACTATATACCAGAAACCGGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

Chr4_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

359

Start:

9841271  

End:

9841629

Strand:

-

>Chr4_LTR-Cassandra_100

TGTAATGTCCCATCCGTCCCTACCAGTGAGCACCTACGTCCTCACTCGGGTCTGTGGGCCCCACCTCTGTCCGACAGTCGGTCCGTCATTTTTTTAAGAGGCTCTAAAGACTTGTTACTATCCCTACAAATCACCACATGATCTTTTTCCGTGTTTTGGCCTCACTCACACGGTACCGGGAATCACTTCCCGATAGGTCACCCATTCTAGTGCTACTCCAGCCAAAGCATGCTTAACTCTAGAGTTCTAACTAGGAGTGACCAAAAAGATAAGTGCACTTTGGTGATATAGGTAGCCAAATCAAATCTCTTAAACTCTCCTCATGCACCACTATATATACCAGAAACTAGAATGTTACA