ID Class Order Superfamily Length Start End Strand View
NSCAFA.383I_LTR-Cassandra_261 RetrotransposonsLTRLTR-Cassandra3414385844198+
NSCAFA.383I_LTR-Cassandra_262 RetrotransposonsLTRLTR-Cassandra3274427644602+
NSCAFA.420_LTR-Cassandra_263 RetrotransposonsLTRLTR-Cassandra3205708257401-
NSCAFA.420_LTR-Cassandra_264 RetrotransposonsLTRLTR-Cassandra3225758957910-
NSCAFB.280_LTR-Cassandra_265 RetrotransposonsLTRLTR-Cassandra1779591496090-
NSCAFB.280_LTR-Cassandra_266 RetrotransposonsLTRLTR-Cassandra1079609296198-
NSCAFB.280_LTR-Cassandra_267 RetrotransposonsLTRLTR-Cassandra2149621896431-
NSCAFB.315_LTR-Cassandra_268 RetrotransposonsLTRLTR-Cassandra3724237742748+
NSCAFC.101_LTR-Cassandra_269 RetrotransposonsLTRLTR-Cassandra361311214311574+
NSCAFC.101_LTR-Cassandra_270 RetrotransposonsLTRLTR-Cassandra362311681312042+
NSCAFC.115_LTR-Cassandra_271 RetrotransposonsLTRLTR-Cassandra865286952954-
NSCAFC.115_LTR-Cassandra_272 RetrotransposonsLTRLTR-Cassandra3285301653343+

< 10 11 12 13 14 > Total 14


Cardamine hirsuta (v1.0)

ID:

NSCAFA.383I_LTR-Cassandra_261

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

341

Start:

43858  

End:

44198

Strand:

+

>NSCAFA.383I_LTR-Cassandra_261

GGTATATAGTGGTATATGAGGAGAAGCTTAAGAAATTTGATTTAGCTACTTATATCACTAAAGTACACTTATCTTTTTGGTTAGTTGTCAAGTTAGAACTTCAGAGTTAAGTGTGCTTGGCCTCGAATAGCATTAGAATGTGTGATCTACTGAAAAGTAATTATTGGTTCTGTGTGAGTAAAACGAAAATAAAGAGAAAGATCATGTGGTAATTTGTAGGGGATAGTAACAAGTCATCCAAAACTCCTAAAAATTAACGTACCGCCTGTCGGACAAATATAGGGTCCACGGCCCTAGAGAGGGCGTTGGAGCTCATGGACGATGGTGGACGGGGCATTATA

Cardamine hirsuta (v1.0)

ID:

NSCAFA.383I_LTR-Cassandra_262

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

327

Start:

44276  

End:

44602

Strand:

+

>NSCAFA.383I_LTR-Cassandra_262

TAACATCCCGGTTTCTGGTATATAGTGGTCTATGTGGAAAGTTTAAGAGAATTTATTTTGCTATCTATATTATCAAAGTGCACTTAAATTTTGTGTCGCTTGTTCAAATAGAACTCTAGAGTTAAGCATGTTTGTACTAGAATAGCTTTAAGATGTGTGACTTACTGAAAAGTGATTTTCGGTACTGTTTGAGTTAGATTAAAATACGGGAATAATGATATGGTAATTTGTAGGGATAATAACAAGTATTCCAAACCTTCTAAAAATTAATACAATGCCTGTCAAATGAAGTTGGGCCCCTGGATCTGAAGAGGGTATGGGGTCCAC

Cardamine hirsuta (v1.0)

ID:

NSCAFA.420_LTR-Cassandra_263

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

320

Start:

57082  

End:

57401

Strand:

-

>NSCAFA.420_LTR-Cassandra_263

GTGAGCCTCCACGGCCTCTCTAGGCCTGTGGGCCTCACCCTTGTCCAACGGCCGTTGTATTAATTCTGAAGGCTCTAAAAACTTGTTACTTTCTCTAAAAATCACCACATGATCTTTCCCCGTGTTTTGCCCTCACTCACACGGTACCGATAATCACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCACCTCAAACACGTTCAACTCTGGAGATCTCTCATGATGGTTGACAGAATATACCAGAAACTTTGATGATATAGGTAGCCAAATCAAATCTCTTAACCTTTCCACTATATACCAGAAACCGGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFA.420_LTR-Cassandra_264

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

322

Start:

57589  

End:

57910

Strand:

-

>NSCAFA.420_LTR-Cassandra_264

GTGAGCCTCCACACCCTCGCTAGGCCCGTGGGCTTCACCCTTGTCCGACGGCCGGTGTATTAATTCTGAAAGCTCTAAAGACTTGTTACTATCCTTACAAATCACAACATGATTCTTTCCCCGTGTTTTGGCCTCACTCACACGGTACCGACAATCACTTCCCGGTAGGTCACCCATCCTAATACTACTCCAGTCCAAGCACGCTTAACTCTAAAGTTCTCTCAGGATGATTGACAAAAAAGATAAATGCATTTTGGTGATATAGGTAGCCAAATCAAATCTCTTAACCTTTCCACTCTATACTAGAAACCATAATGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFB.280_LTR-Cassandra_265

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

177

Start:

95914  

End:

96090

Strand:

-

>NSCAFB.280_LTR-Cassandra_265

TTACTTTCCGATAGGTCACTCATCCTACTACTACTCCAACTCAAACACGTTTAACTCTAGAATTCTCTTTGGACAAGTGACAGAAAAGATAAGTGCACTTTGGTGACATAAATAACCAAATCAAATCTCTTAAGTCCTCCTCATCCACCACCATATACCAGATATTGGGATGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFB.280_LTR-Cassandra_266

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

96092  

End:

96198

Strand:

-

>NSCAFB.280_LTR-Cassandra_266

TCATCCCCACTCACAAAGTCCAACGTCCTTGTTGCACACCAAGACTGCCACCCCCATGGTGTGAGCCTACATATTTTCACACTCATCTTACTTCTGCTCTGATACCA

Cardamine hirsuta (v1.0)

ID:

NSCAFB.280_LTR-Cassandra_267

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

214

Start:

96218  

End:

96431

Strand:

-

>NSCAFB.280_LTR-Cassandra_267

GTGAGCGCCCATGCCCTCTCTCAGCTCTTGGGCCTTACCCTTATCTGACGACTGGTGTGCTCCTCCCGAGAGGCTCAGAAGATATGTTATAAAACACCACATGATCTTTTCCCGTGTTTTGGGCTCACGCACACGGTACCACAAATGAGTTTATGAAAGGTCACCCATTCTAATACTTCTCCAGCCCAAACACGCTTAACTGTGGAGTTCTTTC

Cardamine hirsuta (v1.0)

ID:

NSCAFB.315_LTR-Cassandra_268

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

372

Start:

42377  

End:

42748

Strand:

+

>NSCAFB.315_LTR-Cassandra_268

TATAACATCTCAGTTTCTGGTATATGGTAGTGTATGTGAAGAGGGTTAAGAGATTTGATTTGGCTACCTATGTCACCAAAGTGCACTTATATTTTCCGTCACCCCTCTAGTTAGAACTCCAAAGTTAAGCGTGCTTGGGTTAGAGTAGCACTAGAATGGGTGACCTATCGGGAAGTGATTCCCGGTACCGTGTGAGTGAGGCCAAAAAACAAGAAAATATCATGTGGTGATTTGTAGGGATAGTAACAAAGATTTGGAGCCTCCTAAAAATTAATACACCGACCATCGTACATGGGTGGGGCCCATGGGCCCAAGAGAGGACACCAAGAAAGAACATGGGTGTTCACTGGTAGAGACGGTCGGGGCGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFC.101_LTR-Cassandra_269

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

361

Start:

311214  

End:

311574

Strand:

+

>NSCAFC.101_LTR-Cassandra_269

TGTAACATCCCAGTTTCTGGTATATATAGTGGTGCATGAGAAGAGTTTAAGAGATTTGATTTGGCTACCTATATCTTCAAAATGCACTTATCTTTTCTGTCAACCATCCTGAGAGAACTCCAGAGTTAAGCGTGCTTGGGCTGGAATATTACTAAAATGAGTGACCTATCGGAAAGTGATTCCCGGTACCGTGTGAGTGAGGCCAAAACACGGGGAAAGATCTTGTGGTGATTTGTAGGGATAGTAACAACTCTTTAAAGCCTCGTAGAAAATTAATGCACTGACCGTCGGACATGGGTGGGGCCCTTGGGCCCGAGAGAGGACGTGGGTGCTCACTGGTAGGGACGGTCGGGGAGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFC.101_LTR-Cassandra_270

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

362

Start:

311681  

End:

312042

Strand:

+

>NSCAFC.101_LTR-Cassandra_270

TGTAACATCCCGATTTGTGGTATAGATATAGTGGTGCATGAGGAGAGCTTAAGGGATTTGATTTGGCTACCTATGTCGCCAAAGTGCACTTATCTTTTCTGTCAACCATCCTGAGAGAACTCCAGAGTTAAGCGTGCTTGGGCTGAAGTACTACTAGAATGGGTGACCTATCGGGAAGTGATTCCCGGTACCGTGTGAGTGAAGCCCAAACACGGAGAAAGATCTTGTGGTGAATTGTAGGGATAGTAATAAGTCTTTAGAGCCATGTAGAAAATTAATGCACCGACCGTCGGACAGGGGTGGACCCATGGGCCCGAGAGAGGACGTGGGTGCTCACTGGTAGGGACGGTCGGGGCGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFC.115_LTR-Cassandra_271

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

86

Start:

52869  

End:

52954

Strand:

-

>NSCAFC.115_LTR-Cassandra_271

AGTGCACTTTGGTGATATAGGTAGCAAAATCAAATCTCTTAAGCTCTCCTCATGCACCACCATATACCAGAAACCGAGATGTTACA

Cardamine hirsuta (v1.0)

ID:

NSCAFC.115_LTR-Cassandra_272

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

53016  

End:

53343

Strand:

+

>NSCAFC.115_LTR-Cassandra_272

GGTATATAGTGGTGCATGAGGAGAGCTTAAGAGATTTGATTTGACTACCTATATCACCAAAGTGCACTTATCACCAAAGTGCACTTATCATTTCCGTCACTCCTCTAGTTGAAACTCCAGAGTTAAGCGTGCTTGGGCTGAAGTAGCACTAGAATGGGTGACCCATCGGAAAGTGATTTCCGGTACTGTGTGAGTGAGACCAAAACACGGGGAAAACTCATGTGGTGATTTGTAGGGATAATAACAAGTCTTTAGAGCCTTCAGAATTAATGCACCGGCCGTCGGACGAATGTGGGGCCCACAGATCTAGAGAGAGTGTGGAGGCCCA