TBGR-Browse-Bre-LTR.LTR-Pao

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffold33\|size1474841_LTR-Pao_61	Retrotransposons	LTR	LTR-Pao	347	977246	977592	+
scaffold33\|size1474841_LTR-Pao_62	Retrotransposons	LTR	LTR-Pao	107	977633	977739	+
scaffold33\|size1474841_LTR-Pao_63	Retrotransposons	LTR	LTR-Pao	258	978655	978912	+
scaffold33\|size1474841_LTR-Pao_64	Retrotransposons	LTR	LTR-Pao	291	989018	989308	+
scaffold33\|size1474841_LTR-Pao_65	Retrotransposons	LTR	LTR-Pao	125	989403	989527	+
scaffold60\|size689887_LTR-Pao_66	Retrotransposons	LTR	LTR-Pao	141	223626	223766	-
scaffold60\|size689887_LTR-Pao_67	Retrotransposons	LTR	LTR-Pao	142	228565	228706	-
scaffold7\|size4355475_LTR-Pao_68	Retrotransposons	LTR	LTR-Pao	91	3378773	3378863	+
scaffold80\|size432629_LTR-Pao_69	Retrotransposons	LTR	LTR-Pao	552	214313	214864	-
scaffold80\|size432629_LTR-Pao_70	Retrotransposons	LTR	LTR-Pao	103	215594	215696	-
scaffold82\|size403348_LTR-Pao_71	Retrotransposons	LTR	LTR-Pao	249	155462	155710	+

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LTR-Pao_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

347

Start:

977246

End:

977592

Strand:

+

>scaffold33|size1474841_LTR-Pao_61

ATCTCAATTGTATCCGCGTCTTTAACACCGTTCCATTCGTATGACTGATCTTCGTTCAATACTTCCTTTTTGTGCGTAAAAAAATACCCATCTTGAGGTAGTTTTATATGACCTCTCTGTTGACTCTGAACCATCTCGTCTCTCAGTTTTTTTTACCTCATCCGTAGCGTTCACACTCACCAGAGAATACTCTCACCAGGATATTGCGACACACAAACTACCATCCACTTCTTCGGGACTTTCTTGTTGCTCCTCACCTTCACAGGCGAATCTTGAATCTTAGTGATCTCTTTGATTGAGTTTGACTGTGGGGATTGCTTCATTTGAGGCACTTGATCATTGTTGTT

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LTR-Pao_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

107

Start:

977633

End:

977739

Strand:

+

>scaffold33|size1474841_LTR-Pao_62

TTGTTACTTCCAACCTTCACATACGAATCTTGAATGTTAACAGTCTCTTTAACTGACTTTGACGGTGGAGATTGTTCGGTTTGATGAAGCACTTGATGATTCTTGTT

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LTR-Pao_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

258

Start:

978655

End:

978912

Strand:

+

>scaffold33|size1474841_LTR-Pao_63

GAGTTGGAGATGAGAATTGTGAACGATCTGGCATTGTTCGAGGTTCAGATCCTCTCGAAGAATAATAACGCCGTCGACGATAAGGGTTTGTTTCGAAACTGGGATAGTTGAGACTCCTCGATCTTCTGTTTGACCTCTAACATTGTATCCCTATAATCAACTTCAATCTCGAATGATGAGCCACTCAGAATCTCGACGAGAAACTTCATAGTTGTATCAATAGAGACTGATGAAGAAAACAGCGAGTAAAGAGAGAGA

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LTR-Pao_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

291

Start:

989018

End:

989308

Strand:

+

>scaffold33|size1474841_LTR-Pao_64

TGGAGATTGCTCCGTTTGTGGCATTTGATCGTTGTTGTGATTAGGGTTATCGTCAAGCAGAGACGTCGAGTTGGAGACGAGAATTGTGAACGATGTGGCATTGTTCGAGGTTAAGATCCTCTCGAAGAATAACAACGCCGTCGATGATAAGCGTTTGTTTCGAAACTAGGATACGTTGAGACTTCTCAATATTCTGTTTGACCTCTAACAGTGTATCTCCGTAATCCACTTCAATCTCGAATGATGAGCCACTTAGAATCTCGACGAGAAACTTCATAGTTGTATCAATAG

Boechera retrofracta (v1.0)

ID:

scaffold33|size1474841_LTR-Pao_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

125

Start:

989403

End:

989527

Strand:

+

>scaffold33|size1474841_LTR-Pao_65

TTTCAATTTCAATGGAGACTGATGAAGAAGTGAGAGAAGATTATGTCAACTTCGGACTTTTTGTAAGTTGTAACTAAAGTTCCGCAGAATGTATTAACTAAATGACATACTTCCATTGGATCTTA

Boechera retrofracta (v1.0)

ID:

scaffold60|size689887_LTR-Pao_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

141

Start:

223626

End:

223766

Strand:

-

>scaffold60|size689887_LTR-Pao_66

TGTAAGAGGAGTCTTATTCATGTAAAGAGGCTGTACAAGAATATATATACAGTCTAACGAATACTCTAGGTTTAGGTAAATACAGAAGATTCCTTATATGATTGATTATGTATCATTGACTTGATTTGAGTATCTTTAACA

Boechera retrofracta (v1.0)

ID:

scaffold60|size689887_LTR-Pao_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

142

Start:

228565

End:

228706

Strand:

-

>scaffold60|size689887_LTR-Pao_67

TGTAAGAGGAGTCTTATTTATGTAAAGAGGTTGTACAAAAATATATATACAGTCTAACGAATACTCTAGGTTTAGGTAAATACAGAAGATTCCTTATATGATTGATTATGTATCATTGACTTGATTTGAGTATCTTTTAACA

Boechera retrofracta (v1.0)

ID:

scaffold7|size4355475_LTR-Pao_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

91

Start:

3378773

End:

3378863

Strand:

+

>scaffold7|size4355475_LTR-Pao_68

AGCTGTGAAGCGGAAGGTAAATTTTGAACAAAGCAAAAAACTTCAAGAAAGACTGAAAGCTATAAGGAAAGAAGAAACTGCAGAGACTTGA

Boechera retrofracta (v1.0)

ID:

scaffold80|size432629_LTR-Pao_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

552

Start:

214313

End:

214864

Strand:

-

>scaffold80|size432629_LTR-Pao_69

ACAACTCTCGTCTCCAGCTTTACATCTCTTCTCCCGGTAACAACGACCAAAACTGTAATCAGAACTGCAATAGTCAAGTGTTGAAAACAGACCAATCTCCACAGTCAAACTCAACAGGACAGATCATTAACGGTCATCAAGATTCAACTGTGATGATGGCAATGAGCAACAACAACAACCCGAAGAAACTGAGAGTAATGGTGCTGCCAAAATGCGGGACAAGAAAGATTCCAGTGGAGGTGAACGCAGGGGATAACGTTGGAGAATTAAGGAAAGAGCTGGCTAAGATTCAACGAGGTTTCAATTAAGTCTGCCTCAAGAAGGTTATTTCTTTATATACAAACAGAATGTAATGGACGACGACCGATCTTTCCGGTGGCATCGTGTTGATCAAGGCGACATAATTGGGATTTTCAACAGAAGTGTTTCCGGTGGCTCTTAATACCTATAATTTTCAAGCTTTAACTCTCTGCAACCTCCTCCTTCCTTATAGCTTTCAGTCTTTTATTGAAGTTTCTTGCTTTCTTCGAATTGTATTTTCGTTTCACAGCT

Boechera retrofracta (v1.0)

ID:

scaffold80|size432629_LTR-Pao_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

103

Start:

215594

End:

215696

Strand:

-

>scaffold80|size432629_LTR-Pao_70

CTCTCTCTTTGCTCTCTTCTTCATAAGTCTTAAACACCAATTGATACTATTATGGATGTGTGCTTCGAGATCAGAGTGGCTACACATTCGAGATTGAATTGGG

Boechera retrofracta (v1.0)

ID:

scaffold82|size403348_LTR-Pao_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Pao

Length:

249

Start:

155462

End:

155710

Strand:

+

>scaffold82|size403348_LTR-Pao_71

TTGATATCGCTAGGAGAGATGGAGAGAAAAAAGACGAAGGTTGTAGAGGTACTAGAATTCAAAGTAAAGATGGTCTTGAAGAACATTGCCTTGGATGAAAAGAGTTTTTTTGAAAACAGGAAAACTTTGAGACTTCTCAATCTTATGTTAAATCATTAACACTGTATCTCAAAATCAACATCAATGGAGAACGATGAGCCACTTTGAGTATCGACGACTACCTTCATACTTGTATCAATGGTGTTTCAA