Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_21Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
390Start:
344870End:
345259Strand:
->scaffold33|size1474841_LTR-Pao_21
CCTCTCTCTCTCTCTCTTCTTCACAGTCTCCATTGATCTTGAAACACCATTGATACAATTATGAAGGTGATCGTCGATACTCAAAGTGGTTCATCGTTCTCCATTGGTTTTGATATTTGGGATACAGTGTTAACGATTAAACAGAAGATCGAGAAGTCTCAAGGTATCCCTGTTTTCAAACAAACCCTTTCCTTCCAAGGCAATGTTCTTCAAGACTATCTTGATTACTTTGAATGCCAGTTCCTCGACAACTCTCGTATTCTTCTCTCTATCTCTCCTGACGATAACACTACTCAGAACAACAACGATCAAGTGCCATCAAATCCAATTCATGAGTTCGTTAACATTCAAGATTGGCCTGTGATGAGCAACAACGATCAAGTGCCTGAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_22Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
106Start:
345235End:
345340Strand:
->scaffold33|size1474841_LTR-Pao_22
GAGCAACAACGATCAAGTGCCTGAAACCGAGGAATCTCCAATGACATTAGAATCAAAGAAAGAGTTCTTCGAGATTCAAGATTCGCCGGAGGGCAGAAACAATCAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_23Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
435Start:
349115End:
349549Strand:
->scaffold33|size1474841_LTR-Pao_23
TTCTCTCTGTTTTTCACCAGTCTCCATTGATCTTGTAACACCATTGATACAATTATGAAGGTGGTCGTCGATATTCAAAGTGGCTCATCGTTCTCCATTGATGTTGATTTCTGGGATACAGTGTTAACGATTAAACAGAAGATCGAGAAGTCTCAAGGTATTCCTGTTTTCAAACAAACCCTTTTCTTGCAAGGCAAGGTTCTTCAAGACCATCTTGATTACTTTGAATGTCAGTTCCTCCACAACTCTCGTCTCCTTCTCTCCATCTCACCTGACGATAACACAAATCAGAACAACAACGATCAAGTGCCTCATCAAACACAGGAATCTCCATCAGCACCAACAAATCCAATTCATGACGAGTTCGTTAACAATCAAGATTTGCCTGTGAGGCTCTGTGATGAGCAACAACGATCAAGTACGTAAACCCGAGGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_24Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
462Start:
352037End:
352498Strand:
->scaffold33|size1474841_LTR-Pao_24
AACCGAGCAATCTTCACCGTCAGACTCAGTCAAAGAGATCCCTATAAGTTTAGATTCGGCTTTTAAAAAGAAGATCAAGACCATCCCGGTGAATATGACAGTAATGGTGCAACAATTTAAAGAGACCAGGAGGATTCCATTGGAGGTTAACGCACTTGATAACGTTGAAGAACTGAAGAAAGAGCTGGTTAAGAGGCAAGAGAGAGGTGAGTTTAATCTGCCTGAAAGGTATTTCTTTTTACACAAAGAGGGTCTAATATTAGTCGAAAATCGGTCATTCTGGAGGAACGGTGTTGTTCACGGTGATACGATTGAGATTCTCCCCGGATATGTTACCAATGACGACAAATGCCGGCGGCTCCACCATCTTAAGTGGAAACATTAATCGAGCTTAAACTCTGTGCTGTCTCCTCTTTTCTTATAGCTTTTAGTCTTTCTTCAAGTTTTCTTGCTTTGTTCAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_25Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
85Start:
354462End:
354546Strand:
->scaffold33|size1474841_LTR-Pao_25
TCATTTCTCTCTCTCTCTTCTTCAACAGTTTTTATTGATCTTGAAATACCGCTGATACAATTATGAAGTTGTTCTTCAATAATCA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_26Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
323Start:
356447End:
356769Strand:
->scaffold33|size1474841_LTR-Pao_26
TGTCTCTCTCTCTTTCTCTCTTCTTCAACAGTCTCCATTGATCTTGAAACACCATTGATACAATTATGAAGGTGGTCATCGATACTCAAAGTGGCTCAGTGTTCTCCATTGATGTTGATTTCTGGGATACAGTGTTAACGATTAAACAGAAGATAGAGAAGTCTCAAGAAATCCCTGTTTTCAAACAAACCCTATTCTTCCAAGGCAAGGTTCTTCAAGATTATCTTCATTACATTGAATTCCAGTACCTCCACAACTCTCGTCTCCTTCTCTCCATCTCTCCTGACGATAACACTAATCAGAACAACAACGATCAAGCCCTC
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_27Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
132Start:
357572End:
357703Strand:
->scaffold33|size1474841_LTR-Pao_27
AAGAGAGGTTTCAGTTAAGTCTGCTTCAAGAAGGCTATTTCTTTATATATAAACAGAGAATGTAATGGATGATGACAGGTCTTTCCGGTGACAATTGAGATTTTCAACGCAAGTGTTTCCGGTGGCTCTTAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_28Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
417Start:
365029End:
365445Strand:
->scaffold33|size1474841_LTR-Pao_28
TTCTCTCTCTTTTTCACCAGTCTCCATTGATCTTGAAACACCATTGATACAATTATGACGGTGGTCGTTGATATTCAAAGTGGCTCATCGTTCTCCATTGATGTTGATTTCTGGGATACAGTGTTAACGATTAAACAGAAGATAGAGAAGTCTCAAGGTATTCCTGTTTTCAAACAAACCCTTTTCTTGCAAGGCAAGGTTCTTCAAGACCATCTTGATTACTTTGAATGTCAGTTCCTCCACAACTCTCGTCTCCTTCTCTCCATCTCACCTGACGATAACACAAATCAGAACAACAACGATCAAGTGCCTCATCAAACCCAGGAACCTCCATCAGCACCAACAAATCCAATTCATGACGAGTTCGTTAACAATCAAGATTTGCCTGTGATGAGCAACAACGATCAAGTACCTAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_29Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
95Start:
365421End:
365515Strand:
->scaffold33|size1474841_LTR-Pao_29
GAGCAACAACGATCAAGTACCTAAAAGCGAGGAATCTCCAGTGACGTTAGAATTAAGGAAAGAGTTCTTTGGGATTCAATATTTGCCGCCTGTGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_30Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
492Start:
365523End:
366014Strand:
->scaffold33|size1474841_LTR-Pao_30
AAGCAGAAGAAACAGGAATCAAGTGGTTCAAACCGAGCAATCTTCACCGTCAGACTCACACAAAGAGATAATTAGAATTTCAGATTCGCCTGTTAAAAAGAAGATCAAGACCAGCCCGATGAATATGACAGTAATGGTGCAGCCATTTGAAGAGACCAGGAGGATTCCATTGGAGGTTAACGCACGTGATAACGTTGAAGAAATGAGGAAAGAGCTGGTTAAGATGCAACAGAGGGGTGAGTTAAATCTGCCCCACGAAGGGTATTTCTTTATACACAAACAGGCTGTATTAGACGAGGATCAGTCATTCTGGTGGAACGGTGTTGCTCACGGTGATACGATTGAGATTTTCCGCGGATATGTTACCAATGACCAATCGCAGCTCCACAATCAGAGGTGGAGGCCGAACATTAATCGAGCTTAAACTGTGTGCACTCTCCTCTTTTCTTATAGCTTTTTAGTCTGTCTTCAAGTTTTCTTGCTTTGTTCAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_31Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
678Start:
366526End:
367203Strand:
->scaffold33|size1474841_LTR-Pao_31
TCACTTTCTCTCTCTCTTCTTCAACTGTCTCCATTGATCTTGAGACACCATTGATACAATTATGAAGTTGTTCTTCAAGAATCCGAGTGGCTCATCGTTCGAGATTGAAGTGGGTTACAAGGATACACTGTTAGAGGTCAAACAGAAGATCGAGAAGTCTCACCGTATCCATGTTTCCAAATAAACCCTTTTCTTCGACGACATGGTTCTTCAAGGCCATCTTGATATCGAACAATGCCGGATCGTCCAAGAATCTCGTCTCCAACTCTTCGTCTCTGCTGACCATAACTCTAATCACAATCAATCCGAGCAATCTCCTCCACCGTCAAACTCAACAGAAGAGATCATCGGCGGTCATCAAGATTCGACTGTAACATTTCAAATCGAGCAATCACCATCGTCAAACTCAGTCGAAGAGATGATGATCACTAACATTCAAGATTCGTCTGTGAAGGAAAGGACCCGGAAGAAGAGGATGGTCGTATCCGTTTTGCCATATTCCGGTGAGAGTAAAGTGCCAAGGAGATTCCGGTGGCTGCGAAGATGAACGATAACGTCAAGGAACTGAGGAACGAGTTGGTTAAGATTGAAGAGACGGGTGAGTTAAATCTGCCACAAGAAGGGTATTTTCTTTTACACAAGAACAGAGTATTGAACGAGAATCAGTCATTCTCGGTG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_32Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
408Start:
368811End:
369218Strand:
->scaffold33|size1474841_LTR-Pao_32
TCTCTCTCTTTTTCACCGGTCTCCACTCTCCATTGATCTTGAAACACCATTGATACAATTATGAAGGTGGTTGTAGATACTGAAAGTGGCTCATCGTTCTCCATTGATGTTGGTTTCTTGGATAGAGAGTTAACGATTAAACAGAAGATCGAGCAGTCTCAAGGTATCCCTGTTTTCAAACAAAACCTTTTCTTCCAAGGCAAGGTTCTTCAAGACCATATTGATTACTTTGTACGCCAGTGCCTCCCCAAATCTCGTCTCCTTCTCTTCGTCTCACGTGACGATAACACTAATCAGAACAACAACGATCAAGTGCCTCATCAAACCCAGGAATATCCATCAGCACCATCAAATTCAATTCATGAGTTCGTTACAATCAAGATTGGCCTGTGATGAGCAACAACGATC
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_33Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
450Start:
376042End:
376491Strand:
->scaffold33|size1474841_LTR-Pao_33
CAAACCGAGCAATCTTCACCGTCAGACTCAGTCAAAGAGATCCCTATAAGTTTAGATTCGGCTTTTAAAAAGAAGATCAAGACCATCCCGGTGAATATGACAGTAATGGTGCAACAATTCCATTGGAGGTTAACGCACTTGATAACGTTGAAGAACTGAGGAAAGAGCTGGTTAAGAGGCAAGAGAGAGGTGAGTTAAATCTGCCTGAAAGGTATTTCTTTTTACACAAAGAGGGTCTAATATTAGTCGAAAATCGGTCATTCTGGAGGAACGGTGTTGTTCACGGTGATACGATTGAGATTCTCCCCGGATATGTTACCAATGACGACCAATGCCGGCGGCTCCACCATCTTAAGTGGATACATTAATCGAGCTTAAACTCTGTGCTGTCTCCTTTTTTCTTATAGCTTTTAGTCTTTAATTTCTTCAAGTTTTCTTGCTTTCTTCAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_34Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
419Start:
383224End:
383642Strand:
->scaffold33|size1474841_LTR-Pao_34
TGTCTCTCTCTCTTTCTCTCTTCTTCAACAGTTTCCATTGATCTTGAAACACCATTGATACAATTATGAAGGTGGTCATCGATACTCAAAGTGGCTCAGTGTTCTCCATTGATGTTGATTTCTGGGATACAGTGTTAATGATTAAACAGAAGATCGAGAAGTCTCAAGAAATCCCTGTTTTCAAACAAACCCTATTCTTTCAAGGCAAGGTTCTTCAAGATTATCTTCATTACTTTGAATTCCAGTACCTCCACAACTCTCGTCTCCTTCTCTCCATCTCTCCTGACGATAACACTAATCAGAACAACAACGATCAAGTGCATGTGCCTCAAACGGAGCAATATTCATCAGCACCATTAAATCCTATTGATGAGTTCGTTAACAATCAAGGTTGGCCTGTGATGAGCAACAGCGATCAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_35Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
87Start:
383627End:
383713Strand:
->scaffold33|size1474841_LTR-Pao_35
GAGCAACAGCGATCAAGTACTTCAAACGGAGGAATCTCCATTGACGGTAGAATCATGGAAAGAGTTCCTTGGGGTTCAAGATTCGCC
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_36Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
490Start:
383990End:
384479Strand:
->scaffold33|size1474841_LTR-Pao_36
AAGCAGAAGAAACAGGAATCAAGTGGTTCAAACCGAGCAATCTTCACCGTCAGACTCACACAAAGAGATAATTAGAATTTCAGATTCGCCTGTTAAAAAGAAGATCAAGACCAGCCCGATGAATATGACAGTAATGGTGCAGCCATTTGAAGAGACCAGGAGGATTCCATTGGAGGTTAACGCACGTGATAACGTTGAAGAAATGAGGAAAGAGCTGGTTAAGATGCAACAGAGGGGTGAGTTAAATCTGCCACACGAAGGGTATTTCTTTATACACAAACAGGCTGTATTAGACGAGGATAAGTCATTCTGGTGGAACGGTGTTGCTCACGGTGATACGATTGAGATTTTCCGCGGATATGTTACCATTGACCAATCGCAGCTCCACAATCATAAGTGGTCGAAACATTAAACTAGCTTAAACTTTGTGCAATCTCCTCTTTTCTCATAGCTTTTTAATCTTTCTTCAAGTTTTCTTGCTTTGTTCAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_37Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
759Start:
385428End:
386186Strand:
->scaffold33|size1474841_LTR-Pao_37
TCACTTTCTCTCTATCTTCTTCAACAGTCTCCATTGATCTTGAAACACCATTGATACAATTATGAAGTTGTTCTTCAAGAATCAGAGTGGCTCATCGTTCGAGATTGAAGTGGATTACAGGGATACACTGTTAGAGGTCAAACAGAAGATCGAGAAGTCTTACCGTATTCCTGTTTCCAAACAAACCCTTTTCTTCGACGGCATGGTTCTTCAAGACCATCTTGATATCGAACAATGCCGGATCGTCCAAGAATCTCGTCTCCAACTCTTCGTCTCTGCTGACTATAACCCTAATCACACTCAAACCGAGCAATCTCCCCCACCGACAAACTCAACAGAACAGATCATCGACAACCTTACTGTGACGGTTCAAACCGAGCAATCTCCATCGTCAAACTCAGTCATGATCACTAACATTGAAGAGCCGTCTGTGAAGGAAAGGACACGGAAAAAGAGGATGGTCGTTTACGTTTTGCCATATTCCGGCGAGAGTAAAGCTGCCAAGGAGGTTCCGGTGGCTGTGAATGTGAAGATGAACGATAACGTCAAAGAACTGAGGAACGAGTTGGCTAAGACTGAAGAAAGGGGTGAGTTAAATCTGCCTCAAGAAGGGTATTTTCTTATACACAAAAACAGAGTATTGAACGAGAATCAGTCACTCTCGGTCGTTGGTGTTGATAACGACGATAGAATTGAGATCCTTCCTACACATCTTACTCGTGGCTCTTTTAACCTTGACTCTTAAGTCACAATTCTTTG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_38Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
427Start:
390228End:
390654Strand:
->scaffold33|size1474841_LTR-Pao_38
TCACTTTCTCCCTCTTTCTCAACAGTCTCCATTGATCTTGAAACACCAATACACCATTGATACAATTATGAAGGTGATCGTTGATACTCAAAGTGGTCCATCGTTCTCCATTGGTGTTGATTTCTGGGATACAGTGTTAACGATTAAAAAGAAGATCGAGAAGTCTCAACGTATCCCTGTTTTCAAACAAACCCTTTTCTTCCAAGTTATGGTTCTTCAAGACCATCTTCATACCTTTGTATGCCAGTTCCTCCACAACTCTCGTCTCTTTCTCTTCATCTCTCCTGACAATAACACAAATCAGAACAACAACGATCAAGTGCCTCAAACCGAGCAATATCCATCAGCACCATCAAATCCAATTCATGACGAGTTCGTTAACAATCAAGATTTGCCTGTGATGAGCAAAAACGATCAAGTACTTGAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_39Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
421Start:
394188End:
394608Strand:
->scaffold33|size1474841_LTR-Pao_39
CATCACTTTCTCTCTCTCTCTCTCTTTTTCACCTGTCTCCATTGATCTTGAAACACCATTGATACAATTATGAAGGTGGTATTCAAAGTGGCTCATCGTTCTCCATTGATGTTGATTTCTGGGATACTGTGTTAACGATTAAACAGAAGATCGAGAAGTCTCAAGAAATCCCTGTTTTCAAACAAACCCTATTCTTCCAAGGCAAGGTTCTTCAAGATTATCTTCATTACTTTGACTTCCAGTACCTCCACAACTCTCGTCTCCTTCTCTCCATCTCTCCTGACAATAACACTAATCATAACAACAACGATCATGTGCCTCAAACCGATCAGTCTCCATCAGCACCATCAAATCCAATTCATGAGTTCGTTAACAATCAAGATTTGCCTGTGATGAGCAACAACGATCAAGTACCTGAGGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_40Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
289Start:
428746End:
429034Strand:
->scaffold33|size1474841_LTR-Pao_40
TCACTTTCCCGCTCTCTTCTTCAACAGTCACCATTGATCTTGAAACACCACTGATACAAACAGAAGATCGAGAAGTCTCACCGTATCCTGTTTCCAAACAAACCCTTTTCTTCGACAGCATGGTTCTTCAAGACCATCTTGATATCGAACAATGCCAGATCTTCCAAGAATCTCGTCTCCAACTCATCGTCTCTGCTGACCATAACCCTAATCACAATCAATCCGAGCAATCTCCTCCACCGTCAAACTCAACAGAAAATGTCATCAACCCTCATCAAGATTCGACTGT