Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_41Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
83Start:
429038End:
429120Strand:
->scaffold33|size1474841_LTR-Pao_41
CGCTCAAGTGCCTCAACCCGAGAAATCTTTACCGTCAAACTCAACAGAACAGATCATCGACGGCCATCAAGATTCGACTGTGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_42Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
338Start:
429126End:
429463Strand:
->scaffold33|size1474841_LTR-Pao_42
CAAACCGAGCAATCTCCATCGTCAAACTCAGTCGAAGAGATGATGATCACTAACATTCAAGATTCTTCTGTGAAGGAAAGGACCCGGAAGAAGAGGATGGTCGTATACGTTTTGCCACATTCCGGTGAGAGTAAAGCTGACAAGGAGATTCCGGTGGCTGTGAATGTGAAGATGAACGATAACGTCAAAGAACTGAGGAACGAGTTGGTTAAGATGGAAGAGAGGGGTTAGTTAAATCTGCCTCAAGAAGGGTATTTTCTTATACACAAAAACAGAGTATTGAACGAGAATCAGTCATTCTCGGTGGTTGGTGTTGATCATGACGATATAATTGAGAT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_43Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
101Start:
889771End:
889871Strand:
+>scaffold33|size1474841_LTR-Pao_43
AGCTTTGAAATGGAATGCAAACTTTGAACAAAGCAAGAGACCTTGAAGAAATATTAAAAGCTATAAGCAAAGAGGAGTTGGCACAGAGTTAAACCTTCAAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_44Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
150Start:
898305End:
898454Strand:
+>scaffold33|size1474841_LTR-Pao_44
CACGCGAATGACTGATCTTCATTTCATACTCTCATTCTGTACATAAAGAAGTACTTGAGGCAGATTTATATGACCCTTCCGTTAACTTTCAACCAGCTCGTTTATCAGTATTTTCACGTGATATATCGTATTCACATTCACCCAAATATT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_45Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
387Start:
906875End:
907261Strand:
+>scaffold33|size1474841_LTR-Pao_45
TTAAGAGCCACGGGTAACATGTATAGGAACCATCTCAATTGTATCCGCGTCTTTAACACCGTTCCACTCGTATGAGTGATCTTCGTTCAATACTTCCTTTTTGTGCGTAAAGAAATACCCATCTTGAGGTAGTTTTATATGACCTCTCTGTTGACTCTGAACCATCTCGTCTCTCAGCTTTTTCACCTCATCCGTAGCGTTCACACTCACCAGAATACTCTCACCAGGATATTGCGACACAAAAACTACCATCCACTTCTTCGGGACTTTCTTGTTGCTCCTCACCTTCACAGGCGAATCTTGAATGTTAACGGTCTCTTTGACCGATTTAACTGAGTTTGACGGTGGAGATTCTTCGGTTTGATGAAGCACTTGATGATTCTTGTT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_46Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
410Start:
907247End:
907656Strand:
+>scaffold33|size1474841_LTR-Pao_46
TTGATGATTCTTGTTGCTGCTCCCAACCATCACGGGCGAATCTTGAATCTTACTGATCTCTTGGGCTGGAGATGGCTCGGTTTGCGGCATTTGATAGTCTCCGTTGTGATTAGGGTTATCGTCAGAAGAGACGTCGAGTTGAAGACGAGAATCGTGGACGATCTGGCATGTTTGACGTTAAGATCCTCTCGAAGAATAACAATGCCGTCGACGATAAGGGTTTGTTTAGAAATAGGGATACGTTGAGACTTCTCGATTTTCTGGTTGACCTCTAACAATGTATCTGTGTTATCCACTTCAATTTCAAACGATGAGCCACTCAGAACCTCGACGAGAAACTTCATAACTGTATCAATGGTGTTTCAAAATCAATGCAATGGAGTCAAGAAAGAGAGAGAGAGCGCGAGAGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_47Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
405Start:
913012End:
913416Strand:
+>scaffold33|size1474841_LTR-Pao_47
CTCTTCGGCTGTCAAAGGCCAATCTTTCCCCTCAAAGTACTCTTCAATTGAAATCCACGGTGCTGGAGATGGCTCAGTTTGCGGCATTTGATCGTCGTTGTTGTGAGAGACATCGAGTTGGAGACTAGAATTGTGAACGATCTGGCATTGTTCGACGTTAAGATCCTCTCGAAGAATAACAGCGCCGTCGACGATAAGGGTTTGTTTAGAAACAGGGATACGTTGAGACTTCTCGATCTTCTGTTTGACCTCTAACAATGTATCTGTGTTATCAACTTCAATTTCGAACGATGGGCCAGACAGAACCTCGACGAGAAACTTCATAACTAATAGAGAGTGATGAAGAAAACAGCGAGTAAAGAGAGAGATAAAGTGATTGTTTTGTAAAGAAAATTTACGTAGAAT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_48Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
356Start:
915420End:
915775Strand:
+>scaffold33|size1474841_LTR-Pao_48
CTCTTCGGCTGTCAAAGGCCAATCTTGCCCCTCAAAGTACTCTTCAATTGAAATCCACGGTGCTGGAGATGGCTCGGTTTGCGGCATTTGATCGTCGTTGTTGTGAGTAGGATTATCGTCAGCAGAGACATCGAGTTGGAGACGAGAATTGTGAACGATCTGACATTGTTCGACGTTAAGATCCTCTCGAAGAATAACAGCGCCGTCAACGATAAGGGTTTGTTTCGAAACTGGAATACGCTGAGACTCCTCGATCTTCTGTTTGACCTCTAACATTGTATCCCTATAATCAACTTCAATCTCGAATGATAAGCCACTCAGAATCTTGACGAGAAATTTCATAGTTGTATCCAATG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_49Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
393Start:
920536End:
920928Strand:
+>scaffold33|size1474841_LTR-Pao_49
TTGTTGTTTCTTATCACCTTAAGAGGCGAATTTTGAACGTTAACGATCTCTTCGGCTGAGTTTAACAGTAAAGATTTCTCCGTTTGTAGCATTTGATCGTTGTTATAATTAGGGTTAGGGTAAGGATCGACGAAGATTTTTAGACGAGAGTTGTGGAGGATCTGGCATTGTTCGATATCAAGATGATCTTGAAGAACATTGCCTTGGAAGAAAATGGTTTGTCTGGGAACAGGGATACGTTGATACTTCTCGATCTTCTTTTTGATCTCCAACACTGTATGCCAGTAACCCAATTCAATCTCGAACGTATAGCCACTCTGAATCTCGAAGAACACATCCATAATTGTATCAATTGGTGTTTCAAGACTTATGAAGAAGAGAGTAAAGAGAGAG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_50Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
882Start:
921882End:
922763Strand:
+>scaffold33|size1474841_LTR-Pao_50
AGCTGTGAAACGAAAATACAATTCGAACAAAGGAAGAAACTTCAATAAAAGACTATAAGGAAGGAGGAGGTTGCAAAGAGTTAAAGCTTGAAAATTTTAGGTATTAAGAGCCACCGGAAACACTTCCGTTGAAAATTTCAATTGTGTCGCCGTGTTCAACACGGTGCCACCGGAATGATCTGTCGTCGTCCATTACATTCTGTTTGTATATAAAGAAATAACCTTCTTGAGGTAGAGTTAATTGAAACCTCTGTTGAATCTTAGCCAGCTCTTTCCTTAATTCTCCAACGTTATCCCCTGCGTTCACCTCCACTGGAATCTTCCTTGTCCCGCATTTCGGCAGCACCATTACTCTCAGTATCTTCGGGTTGTTGTTGTTGTTGCTCATTGCCATCATCACAGTTGAATCTTGAAGACCGTTAATGATCTGTTCTGTTGAGTTTGACTGTGGAGATTGCTCTGTTTTCAACATTTGATTGTCGCGGTTCTGACTACGGCTTTGGTCGTTGTTACCGGGAGAAGAGATGTAAAGCTGGAGACGAGAGTTGTGAAGGATCACACATTGTTCGATATCAAGATGATCTTGAAGAACATTGCCTTGGAAGAAAAGGGTTTGTTTGGAAACTGGTATACGTTGATACTTCTCGATCTTCTTTTTGATCTCTAACACTGTATCCCAGTAACCTACTTCAATGCAGAACGATGAGCCTTTCTGAGTCTCGAAGAACACATCCATAATTGTATCAATGGTGTTTCAATTTTCAGTGGAGACTGATGAAGAAGAGAGAGAAGTGAGAGAAGACAATGTCAACTTCGGACTTTTTGTAACTAAAGTTCCGCAGAATGTATTAACTAAATAACCTATTTCCATGGGATCTTATT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_51Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
358Start:
933277End:
933634Strand:
->scaffold33|size1474841_LTR-Pao_51
GAAACACTTGATACAATTATGAAGCTTTTGGTCTGAGATTCTGAGTGGCTCATCATTCGAGATTGAAGTGGATTATAGGGATACAATGTTAGAGGTCAAACAGAAGATCGAGGAGTCTCAACGTATCCCAGTTTCGAAACAAACACTTATCGTCGACGGCGTTGTTATTCTTCGAGAGGATCTGAACCTCGAACAATGCCAGATCGTTCACAATTCTCATCTCCAACTCGACGTATCTGCTGACGATAACCCTAATCACAACGACGATCAAATGCCACAAACGGAGCAATCTCCAGCATCATGGATTTCAGTTGAAGAGTACTTTTTGAGGCAAGATTGGCCTTTGACAGCCGATGAG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_52Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
435Start:
942079End:
942513Strand:
->scaffold33|size1474841_LTR-Pao_52
CGAAACTTTCTTTACAAAACTCTCACTTTCTCTCTCGCTCTCTCTCTTTTCTTGACTCCATTGCATTGATCTTGAAACACCATTGATACAGTTATGAAGTTTCTCGTCGAGGTTCTGTGTGGCCCATCGTTCGAAATTGAAGTTGATAACACAGATACATTGTTAGAGGTCAAACAGAAGATCGAGAAGTCTCAACGTATCCCTGTTTCTAACCAAACCCTTATCGTCGACGGCGCTTACATTCTTCGAGAGGATCTTAACGTCGAACAATGCCAGATCGTTCAAAATTCTCGTCTAGAACTCGATGTCTCTGCTGACGATAATCCTACTCACAACAGCGACGATCAAATGCCGCAAACCGAGCCATCTCCAGCACCGTGGATTTCAATTGAAGAGTACTTTGAGGGGCAAGGTTGGCCTTTGACAGCCGAAGAG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_53Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
113Start:
942595End:
942707Strand:
->scaffold33|size1474841_LTR-Pao_53
AGCAGCAAGAATCAAGTGCTTCATCAAACAGAGCAATCTCCACCGTCAAACTCAACAAGACAGATCATCACCGGTCATCAAGATTCGCCTGTGACGGTTGGGAGCAGCAGCAA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_54Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
94Start:
942700End:
942793Strand:
->scaffold33|size1474841_LTR-Pao_54
AGCAGCAAGAATCAAGTGCTTCATCAAACCGATCAATCTCCACCGTCAAACTCAGCAGGACAGATCATCACCGGTCATCAAGATTCGACTGTGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_55Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
320Start:
942787End:
943106Strand:
->scaffold33|size1474841_LTR-Pao_55
ACTGTGACGGTTAATGTGCCTCAAACAGAGCAATCTCCACCGGTGCCATCAGACTCAGTCAAAGAGTTCACTAACATTCAAGAGTCCCCTGTTGATGTGGGGAGCAACATAGAAGTCCCGAAGAAGAGGATTACAGTAATTGTGGTTACATATTCCGGTCAGAGTCTTTTTGTGAGAGTGAACACGACCGATCCGGTGAATATACTGAGAAGGCAGTTGGTTCAGAGTCGACGAGAGGGACGTATAAGTCTGCCTCAAGAAGAGTATCTCTTTATGAACCAACAAAATGTAGTAATGAACGAAGATGAGTCCTTTTCGTG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_56Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
435Start:
953958End:
954392Strand:
->scaffold33|size1474841_LTR-Pao_56
CGAAACTTTCTTTACAAAACTCTCACTTTCTCTCTCGCTCTCTCTCTTTTCTTGACTCCATTGCATTGATCTTGAAACACCATTGATACAGTTATGAAGTTTCTCGTCGAGGTTCTGTGTGGCCCATCGTTCGAAATTGAAGTTGATAACACAGATACATTGTTAGAGGTCAAACAGAAGATCGAGAAGTCTCAACGTATCCCTGTTTCTAACCAAACCCTTATCGTCGACGGCGCTTACATTCTTCGAGAGGATCTTAACGTCGAACAATGCCAGATCGTTCAAAATTCTCGTCTAGAACTCGATGTCTCTGCTGACGATAATCCTACTCACAACAGCGACGATCAAATGCCGCAAACCGAGCCATCTCCAGCACCGTGGATTTCAATTGAAGAGTACTTTGAGGGGCAAGGTTGGCCTTTGACAGCCGAAGAG
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_57Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
889Start:
968365End:
969253Strand:
+>scaffold33|size1474841_LTR-Pao_57
AGCTGTGAAACGATAATACAATTGGAAGAAAGCAAGAAACTTCAATAAAAGAATGAAAGCTATAAGCAAGGATGAGGTTGCAGAGAGTTAAAGCTTGAAAATTGTAGGTATTAAGAGCCACCGGAAACACTTCCGTTGAAAATCTCAATTGTGTCGCCGTGATCAACACGGTGCCACCGGAAAGATCGGTCGTCGTCCATTACATTCTGTTTGTATATAAAGAAATAACCTTCTTTAGGCAGAGTTAATTGAAACCTCTGTTGAATCTTAGCCAGCTCTTTCCTTAATTCTCCAACGTTATCCCCTGCGTTCACCTCCACTGGAATCTTCCTTGTCCCGCATTTCGGCAGCACCATTACTCTCAGTATCTTCGGGTTGTTGTTGTTGTTGCTCATTGCCATCATCACAGTTGAATCTTGAAGACCGTTAATGATCTGTTCTGTTGAGTTTGACTGTGGAGATTGCTCTGTTTTCAACATTTGATTGTCGCGGTTCTGACTACGGCTTTGGTCGTTGTTACCGGGAGAAGAGATGTAAAGCTGGAGACGAGAGTTGTGAAGGATCACACATTGTTCGATATCAAGATGATCTTGAAGAACATTGCCTTGGAAGAAAAGGGTTTGTTTGGAAACTGGTATACGTTGATACTTCTCGATCTTCTTTTTGATCTCTAACACTGTATCCCAGTAACCTACTTCAATGCAGAACGATGAGCCTTTCTGAGTCTCGAAGAACACATCCATAATTGTATCAATGGTGTTTCAATTTTCAGTGGAGACTGATGAAGAAGAGAGAGAAGTGAGAGAAGACAATGTCAACTTCGGACTTTTTGTAACTAAAGTTCCGCAGAATGTATTAACTAAATAACCTATTTCCATGGGATCTTATT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_58Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
795Start:
969359End:
970153Strand:
+>scaffold33|size1474841_LTR-Pao_58
TNGAAAATTGTAGGTATTAAGAGCCACCGGAAACACTTCCGTTGAAAATCTCAATTGTGTCGCCGTGATCAACACGGTGCCACCGGAAAGATCGGTCGTCGTCCATTACATTCTGTTTGTATATAAAGAAATAACCTTCTTTAGGCAGAGTTAATTGAAACCTCTGTTGAATCTTAGCCAGCTCTTTCCTTAATTCTCCAACGTTATCCCCTGCGTTCACCTCCACTGGAATCTTCCTTGTCCCGCATTTCGGCAGCACCATTACTCTCAGTATCTTCGGGTTGTTGTTGTTGTTGCTCATTGCCATCATCACAGTTGAATCTTGAAGACCGTTAATGATCTGTTCTGTTGAGTTTGACTGTGGAGATTGCTCTGTTTTCAACATTTGATTGTCGCGGTTCTGACTACGGCTTTGGTCGTTGTTACCGGGAGAAGAGATGTAAAGCTGGAGACGAGAGTTGTGAAGGATCACACATTGTTCGATATCAAGATGATCTTGAAGAACATTGCCTTGGAAGAAAAGGGTTTGTTTGGAAACTGGTATACGTTGATACTTCTCGATCTTCTTTTTGATCTCTAACACTGTATCCCAGTAACCTACTTCAATGCAGAACGATGAGCCTTTCTGAGTCTCGAAGAACACATCCATAATTGTATCAATGGTGTTTCAATTTTCAGTGGAGACTGATGAAGAAGAGAGAGAAGTGAGAGAAGACAATGTCAACTTCGGACTTTTTGTAACTAAAGTTCCGCAGAATGTATTAACTAAATAACCTATTTCCATGGGATCTTATT
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_59Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
346Start:
971005End:
971350Strand:
->scaffold33|size1474841_LTR-Pao_59
GAAAGACTTGATACAATTATGAAGTTTCTGGTCGAGATTCTGAGTGGCTCATCATTCGAGATTGAAGTCGATTATAGGGATACAATGTTAGAGATCAAACACAAGATCGAGGAGTCTCAACGTATCCCAGTTTCGAAACAAACCCTTATCGTCGACGACGTTGTTATTCTTCGAGAGGATCTGAACCTCGAACAATGCCAGATCGTTCACAATTCTCATCTCCAACTCGACGTATCTGCTGACGATAACCCTAATCACAACGACGATCAAATGCCACAAACGGAGCAATCTCCAGCACCATGGATTTCAGTTGAAGAGTACTTTTTGAGGCAAGATTGGCCTTTGA
Boechera retrofracta (v1.0)
ID:
scaffold33|size1474841_LTR-Pao_60Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-PaoLength:
212Start:
971872End:
972083Strand:
+>scaffold33|size1474841_LTR-Pao_60
CTGTATCCCAGTAACCCACTTCAATGCAGAACGATGAGCCTTTCTGAGTCTCGAAGAACACATCCATAATTGTATCAATGGTGTTTCAATTTCAATGGAGACTGATGAAGAAGAGAGAGAAGTGAGAGAAGACAATGTCAACTTCGGACTTTTTGTAACTAAAGTTCCGCATGATGTATTAACTAAATGACCTATTTCCATGGGATCTTATT