ID:

scaffold11|size3486627_LTR-Caulimovirus_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

456

Start:

2069216  

End:

2069671

Strand:

+

>scaffold11|size3486627_LTR-Caulimovirus_41

CTATTACAAGAAATGGGTATGGCATATGTAGCCTTTAAAGCAACTAGTACAGATATAACAGATAGACAATCATGCGTTATGCTAGTAGCAGGATTTACGGGAGCACTAAAATTCTGGTGGGACAACTCACTAGATCTACATACACAAAACTCAATAATCAACCATGTTGAAACTATTCAAACAGAAGATGAAGATGGTTTCATTATTGAAACTGAAAAACAAAATGCTGTAGAAGTATTAATTCATACAATTATGATGCATTTTATTGGTAACCCAGCTGAGGAATTAGAAAGCAAAAAAATAGTATTAACAAATTTAAGATGTCCAACTTTAGGAGACTTTAAATGGTATAAAGATGTTTTCATAACTAATATATTTCAAAGACATGACTGCAATCAATCTTTCTGGAAAGAAAGATTTATCGGAGGATTACCAACTTTCTTTGCAGAAAAAGTA

ID:

scaffold121|size156386_LTR-Caulimovirus_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

139

Start:

123111  

End:

123249

Strand:

-

>scaffold121|size156386_LTR-Caulimovirus_42

TCTCTCATAAAAGTGTTGGGAGTCATGCAAGAAATTTTTCTTTCCAAAAAGATTGGTTTGAATCTTGTCGGAGTAAGACCCTAGTGAGGAAAGTGCTTTTGTACCATTAGAAATCACTTAGTTTTTTACATTTAAGATT

ID:

scaffold121|size156386_LTR-Caulimovirus_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

689

Start:

124091  

End:

124779

Strand:

-

>scaffold121|size156386_LTR-Caulimovirus_43

TTTTTGTTACAGAATACCCTTGTATCCTATATCAGGTGTCTGTTTCTACAACTTTTGCTTGATTCGGGTCCGCTATATGCAGACACGAGATTTTTAAGACTTGGTTTTTAATTTGTTGGACTAGAGCGGTATGCTCATTAATCCAAGGGGTTGGGTTTTTCTTTAAACGTTCATGTAGTGGTCTAGCTATTCTATTAATAGTTGGACAAAAATCTAGACATAATTAAGACTTCTTAGGAACCTTTGCAATTGGGTTTTGTCTAAGAGTTTGTCAGAAAATTTATTCGCAGACTCTAATGATTTTTCTATCTGTTTTATCATTCCTTTGAATATGTAATGACCAAGAAATCTAATTTTGGTTTGGAATAGAAGCATTTTTTGTTTTTGAAATAACAAGTCCATTTTTTCGTGCAACATAATTAAAATGTTTTTAGATGTTTGAAATGTTCATCAAGAGAGTTTGAAAAGATTAGTATATCATCAATATATATTATACAAAATTTTGAATATTCTGAAAATATGTCATTCATAATTCTTTGAAATTCGGAAGGTGCATTTTTTAAACCAAAAGGCATCACGTTCCATTGGTACTGCCGAAAAGGAACAGTAAATGATGTTTTATATCGATCATTTTCAGATATTTGGATTTGCCAAAATCCTGATTTTAAATCGAATTTTAAAAGTATTCT

ID:

scaffold12|size4842942_LTR-Caulimovirus_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

478

Start:

1647379  

End:

1647856

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_44

ACAGTCTTTCCACATTCTTAGGATGGTTTGCTACAATGAACGCTTGGAACACCAAATTTTGCAGCTCAGCAAAAGCACTCAATTACCCCTTCAAGAAGCTGAAGAATTCCAACACTTATAATCCGTTCTTCAATCCGCACACCATCTACTTCTTTCACAGGCCTATCAATTTCAATCCAAGATCACAAAAGGTCTATGCAATGCCAACATTGATCCATCACAAAGATTTCAACAAAGGAGTCCGTCCATATTTCAGCATGGCCGAAAATGGAGTTTTTGAGTCCTTCCAGCTACATGCTTTCCGCCTCAACAACACAGACCAAAAGTTTGCCATTCCTTATAAAATGAATTGGTCATTTTATGAGCTTGACTACCAGATGACTCTCGATGAAGTCCTCCAGTTCTTCATGTCAAAAGAAGAAGAGAAAGAAGCAGAGAAGCAAAAGCAGAATACCCAAAAGAAGATTATCAAAGAAGA

ID:

scaffold12|size4842942_LTR-Caulimovirus_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

183

Start:

1648300  

End:

1648482

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_45

TGAGGTAAGCGCTTACGTAAGCATGCTTAAACCTCCCCTATAAATATGTGTGTACCCTTTCATGGGAAGAAAAAATTTCATTTTTTGTAAATAATATTCTCTCTCTAAAATGAGTCTCTAAATTTTCTATATCTCAACATCTTCATAAGCTTTGTTTATTTCTTTCAAACACAAGTTAGCGAT

ID:

scaffold12|size4842942_LTR-Caulimovirus_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

280

Start:

1648704  

End:

1648983

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_46

TGGTATCAGAGCGCATGACTTGTGTATGTTAGTAAGAATCATTGTTTATGTTGTTTGTTTGAGTTTCTGGAAAACTTAACCATCATCATCAATGTCTAACTCTCAAATCATCCCTTTCCCTATAAAATGTTCTACTCTACCTAAATACAGAAATCAAACATCCTCTTCTAATATAGATTATCTTTATGAGGTTTAATATGTTCTAGGAGATCGATTACCTGAAACTACTCTTTCTCTTGTAAATCCTTATGAAATCTTCGTCAGAAAACCAAGTATCTTT

ID:

scaffold12|size4842942_LTR-Caulimovirus_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

418

Start:

1649046  

End:

1649463

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_47

TGAAGGCACTCAAAGTTCAATTACAGATTGTTGACGCACCTATGCAAGAGACTAGTGTAATAGCTATACTACACCATCAGATGGTTTACCGCGTTCAAGCCATGCTCTTGACTTGGTCCTTCCTTCAACAAATGAAACACTATTTCTAGAAGTCACTTAAGCCTCCTAAGCACCTAATGCTATCCAGATCCCTCACCAAATATCCCGAGAAGAACTCATACAGTAGCTTCCTGAAACATGGGTAACAAGTTATGAAAAATTTCATCAGGCACCTCAAGGCCCCATTCAGTCTTCCGAAGTATCTTTTCAACCAAGAAATGATGGAACGACAGAGATAAAATTCGAGAAGCCGCGAACATCCCTATCCCGAAGACCGATGTTCACCCAATTCTCCATTCAAGTTGATGAACACGAATTC

ID:

scaffold12|size4842942_LTR-Caulimovirus_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1525

Start:

1649456  

End:

1650980

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_48

ACGAATTCACCATGGGCCTGCAAAGCTTTCTATATCAACAAAAGAGCAAAACAAGCACGAGGAAAATTACGGCTAGTCATCGACTATAAGCCTCTAAATCAATTCCTCTAAGATATCAAGTTCCCACTACCAACAAGAAAAACATTGTTACAACATCTATCAGGATCAACCATTTTCTCAAAGATTGATTTAAAATCAGGGTTTTGGCAACTTGGGATCCAACCAGAAGAAAGATACAAAACGGCATTTTGTCTACCTAATCGCCACCTTGACTGGAAAGTTCTACCCTTTGGTCAAAAAACAGCTCCGTCCTTGTTCCAACAAGCAATGTTAAAAAAATATGCAAGTCATTGGTCCACACAACATTGATCTATATTGATGACATCCTCGAGATCTCTACAAGTGAAGATGAACATATCCGAACTCTGAAGCAATTTTATGATATAGTAAAATATTATGGAATCATGCTCTCAGCAAAAAGATGATTATAGCACAACAAGAAATCGAGTTCCTTGGTGTCAAGATCAATGAAGGAAGATTTGTACCTCAAGCTCACTTTGCCACATAATTACTCTTTTTCCCTGATGAAAACCTAAAAAAAAGGCAAGTACAACAATTCTTAGGCGCAATCAATTACGTCTGTGACTTTATTCCAAAGCTGTCCCAACTGACACGGCCTCTGCGAAAGATGCTCCAAAAGATACACGACAGACTGAAGCAGTCAAAAAGCTAAAGCTATAAATACAGAAGCTACCACCCCTACAATTTCCTTCTTCAGGAAAATGAATAATTCAGACCGATGTCAGTGATAAGTATTGGGGAGCAATACTGTTCGAAGAGACTGATGGAAAAAGACAAATTTGGGGCTACAGAAGTGGTCGTTTCAAAGAGTCAGAAATGTACTACCACTCCACATTCAAAGAAATCCTAGCCGTCAAAAGAGCTATTGAAAAATTTGAGTTTTACCTGATTGGACACAAATTCAGAATCAAGATGGACATGTCATCTTTTCCAAAAATGCTACAGTTTAGTTAGAAGATAGTTCCATATCAGCAATTGCTACGTTGAAGTGAATGGTTTTCGAATTACGATTTCGAATCCGCCTATTTAAAGGGTATAAAGAACATCTTAGCAGACATGGTCAGCCGCAACCCATTAAAGACGGTCTATACAATGACAAGTGTTGCAGGTTCTAGTTCCTCCGGAAAAAGAAGCCTTTATGACTTTAACAGGAACATACCTAAAGATGCAAAATACATCATCAAAGACGGAACATTCTATAATCACCTCAAGCAAAGGATGTTTCGATACCAGTTTATAATCCTTTGTAGTCATGGAGCCAACAACCACTTTATCATACCACTTGGAATTCATCCTGACTATCCACTCGCTCATTTTTACAGAATCCGGAATGTCAACCTCCAGAAGAAGTTACCTGTTTCCTCTGGTACCTTTGTGCAGTATATACTATTAGAATTATCTTTGATATTCCATGGTTATACCAATATATCCACTGCCCCAGATA

ID:

scaffold12|size4842942_LTR-Caulimovirus_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1065

Start:

1651038  

End:

1652102

Strand:

-

>scaffold12|size4842942_LTR-Caulimovirus_49

CTTCTTCCTCTTCAGATGATGAATCGTCATCTTCAGAATCTGAATATCCGCATATTGCATATTTTTCATCACTATCGTAGGAGTATTGATTTAAGATCGTGATGATCTAGATCAAGTCTGGGACAATATTGGATATCGAATTGATGAGATATTGCTTCTTCTTATTAGACTTGTTAGGGCAATGTTTTGCGAAGTGACCTTCTTTGTGACAGAGGAAGCATCTTGTATTCTTCTTAAAAGTGCGTTTTCTTCTAAGGAATCGTTTACGCCTGAATGAGGATTTTCTTAAGAAATGCCTTGTATCACATGAGCAAGATTATTTCTTCGAACATTTGATCGATAAATTGGACTTCGAGCCTACTTTGGATAGATGCTTTGATTTGTCCATGAATTTTGACCAGAATTCTTTCTGCTTGCAGAGCTAATCGAGTGTCCAGAAAACATACTACTGGATTTGGCCTATGGAAATTTCTTCAACCTCTTGGTTTTGATCTCTGATGTAGAGCTTCGTTTGTTGGTTGAGATAATCGTCTATGGAGGAGAGATATACATGCTTCAAACTTGGATTATTGAGACCATCAAGTACATAATATATTTTTGTTTGTCTTTCTAAATGTTTTGCCAGATCTCTTTTTTTCAAAGAACAACATTTGACTGCAAAGTATTCTTCTTGGAGTTGTTCTCTGATATGGTTGGGAGTACCGATAAACTCTTTTTAGATTTCTCCTAGTAATATTGGGATAATAATTTGGTAAACTTGTAGGTGTATGTACTCTCCGAGGGAATTTTACCATTTTTTAATGTGCCAGAAAGGCGAGCAGTGAATTGTTGGATAACTTGATAAGTTGGTGAAGTAAGGGCTTCGGAAGTCAGCCATGCATGAAATTCATCAAGACGTTCATTCCATTTTTCAAAAGTAATGTCATCAAATGTGAATGTGATTACTCTTGATGCGAACTGTCTTGCTTGTCTGATATCTTCATGTTGGTCATACTGAAATTGCATTTCTTCATTATTGGTTACTTCGTTGATGTTTGGCTCTTCTTTTGGCATGTTGCTTTCTCC

ID:

scaffold12|size4842942_LTR-Caulimovirus_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

138

Start:

1652438  

End:

1652575

Strand:

-

>scaffold12|size4842942_LTR-Caulimovirus_50

TTTGAATGTTGGAAGAGATGGTACAGCATAACGGGATGTGAATATCTCATCAGATGATAGGAAACCTAGGGAAGGTATTGCTGGTCTTGTTGTGTTTTGTAGAAAGAATCCTGGGGAATATGATCCTTGGTATGAAGG

ID:

scaffold12|size4842942_LTR-Caulimovirus_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

243

Start:

3713664  

End:

3713906

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_51

TTTGAAACAATTTATTTATTTTCGGAACATGCTTTACAAAGACATAGAGAAAAGAATTTCAAATATATACATACTGGTTTAGTCCAAGTCGGTATTAAACCACTTTCAAAAGAAGGTCTTAACACCTCAATACTATCTATCTTAAGAGATACTAGATTTAAATTATTTGAAGATTCTTTACTTAGCTCTATAGAATCAAGTTTATGTGCTGGTCCAATATCTTTTGATTGCTATCCAAATTTT

ID:

scaffold12|size4842942_LTR-Caulimovirus_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

169

Start:

3715492  

End:

3715660

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_52

TATGATTGGAATCTTGATGGTATATCTGAATATAATATCCTAAATTTCCTTCAAAAAATGACTATGGCTGCAAACGCTTATAGAACACAAATAGGAAATGAAGATAAAACCGTCGCTGAGCTCCTTATAGTCGGATTTTCTGGACAATTAAAAGGATGGTGGGATAACT

ID:

scaffold12|size4842942_LTR-Caulimovirus_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

123

Start:

3715845  

End:

3715967

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_53

AATCTTAAATGTAAAAAACTAAGTGATTTCCAATGGTACAAAAACACCTTTCTCACTAGGGTCTTACTCCGAAAAGATTCAAACCAACCCTTTTGGAAAGAAAAATTTCTTGCAGGACTTCCA

ID:

scaffold12|size4842942_LTR-Caulimovirus_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1337

Start:

3717465  

End:

3718801

Strand:

+

>scaffold12|size4842942_LTR-Caulimovirus_54

GAAAAAAACACATTGTTGACCTACCCTATGAAGAGAAATTTGATGAAAGAAAAATTCCTACAAAGGATCGACCAATTCAGATGAACTCTGAATTAGAAAGTCATTGTAAGAAAGAAATTTCAAAACTTCTAAACAAAAAAATAATTTCAAAATCAAGATCTCCATGGTCTTGTGCAGCTTTCTATGTGAATAAAAATTTCGAAGTAGAAAGAGGAACTCCTTGTAATAAATTACAAGCCTTTAAATTCAGCATTAAAATGGATTAGATATCCAATACCAAATAAAAAAGATCTTCTACAAAAACTGCATTCTGCTCACATATTTTAAAGTTCGATTTAAAATCAGGATTCTGGCAAATCAAAATATCTGAATATGATCGAAACAAAACAGTATTTACTATTCCTTTTGGGAAATACCAATGGAACGTAATGCCTTTTGGTTTGAAAAATGCACCTTCAGAATTTCAAAGAATCATGAATGACATATTCTCAGAATATTCAAAATTTTGCATAGTTTATATTGATGATATACTTACCATTTCAAACTCTATTGACGAACATTTCAAACATCTAAAAATGTTTTACTATGTTGCACGAAAAAATGGACTTGTTATTTCAAAAACAAAAATGTCCTTGTTCCAAACTAAAATTATATTTCTTAGTCATTATATATCCAAAGGTATGATAAAACCAATAGAAAGGTCATTAGAGTTTGCCAATAAATTTCCTGACAAACTCTTAGACAAAACTCAATCACAAAGGTTCCTAGGAAGTCTTAATTACGTCCTAGATTTTTGTCCAAATATCAATAGAATAGCCAGACCATTACATGACCGTTTAAAGAAAAACCCAACCCCTTGGACAGACGAGCATACTGCTCTAGTTCAACAAATTAAAAAACAAGTATTAGAAATCCCGTTCTGCATATAGCAGATCCGAATTTAGCAAAAATTGTAGAAATAGACGCCTCTGATATAGGATACGGGGGTATTTTGAAACAAAAAAAAACAAATGGTCGTGAAAATATAATACAATTTACTTCTGCTCATTGGAATGAAATCCAAAAGAATTATCAACTATTAAAAAGAAAATTTTAAGTATAGTTTTATGTATACAACAATTTCAAAGTGATCTTTTAAACCAAAGGTTTTTACTAAGAATTGATTGTAAAAGCGCCAAAGATGTTTTACAAAAATATGTTAAAAATCTTGCTTCGAAACAAATTTTTGCCTGATGGCAGGCATTACTAAGTATTTTCGATTTTGATATTGAATATATTAAAAGAGAAACAAATTTTACTCCAGACTTTTTGACTCGAGAATTTCTCCAAAACAAGTA

ID:

scaffold130|size132458_LTR-Caulimovirus_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

148

Start:

4824  

End:

4971

Strand:

-

>scaffold130|size132458_LTR-Caulimovirus_55

GAGATCTAGAAAACCTAGAGAGAACTTAGAAACTCATGAAAGAAAATTTAGAGAGAGAATATTTTATAAATGAAACTTATGTTTTACATGAGAGAATACACATATTTATAGGGAGAGGATAAGGTCCCTTGCATAAACGTTTACTTCA

ID:

scaffold13|size3762591_LTR-Caulimovirus_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

729

Start:

328972  

End:

329700

Strand:

+

>scaffold13|size3762591_LTR-Caulimovirus_56

TGGGAAAAGAGAATTCCAAGGTCCTTATAAAGATCAATCTCCAAAACCCATCTCCTTTGAGCAGAATGGATCGGTTACATACCCTTTCAAAGACGAAAATGGACATTACTTCTTCGACGTCTGCAACTGTACAGCCTGTACAGATGACTACCTCAACTACGAATCTGATGATGAAAAACGAAGGAGAAGAAGAGCAAAGAAAGCTTCTCTCTACAAAAGATATATAGATGGAGATCCTTCGGTGAGCACACTCGGCGAAGACGATGGAAAATATGAATACATAGTTCAGTATTCTCAGAAGAAGAAGCCAGAAGTCCCTGCGATAATGATGTTTAATCCAAACGACTTTCCTCCTATAGAAGACTTTACCAAAGGCGATGTTATCCATAGTCCAAAGATTATACCAACTACGGTTACTTCTTTTGGTCTTGATCCATTATCTCAAGCAGAAAAAGTTCTCAATTGGCAAACTGAAAATGCAATTGCCCAGAACAAACTCCTTCACACGATCAACCATAAGATGGATCATATGGCAAGCAACTACAACAAAAGATTAGCTACCCTGCAAAGCTCCATATCAGAGATTCATGCTCGTCTAGACCAACTTCACTGCGAGATGGTAAAGATGGCGCAAAACATGATGGTCAACACCTCTCAATTCCGACTCAAAAAAACAGAAATGTCCAGCCTCAAAAACCAGTTGAAAGATCTTCAAGGATGCCTAGAAAG

ID:

scaffold13|size3762591_LTR-Caulimovirus_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

4079

Start:

329941  

End:

334019

Strand:

+

>scaffold13|size3762591_LTR-Caulimovirus_57

TCAACCAACCAAAAAACCAGTCTTTTCCTCTTCACAATCCAGTCAAGAATCTCATGAAGAACAAGCAAAAGACAGCAAAAACAAAGGCAAGGCTGAAGACATTGGAATGATTGAGTTCTCAATGACCAATCTACTCAATTCACTAGCAGATCAAGTTCAAGTACCAGCTAACTGCCAAAAGGAAGGAGTATCCCAAGCCTACCAAATAAAAGAAGTCACTCATCTTCCAATAATCAACCATATATCTGATACAAGCTCAGATGACAATGATACAATTACAGAAGATGAGAGATCATTCCCGAAGCAATTCGCCATAGGAGAAAGCAGCGGCCCTAAAGAAGAACATGAACCTGACATAGACGAGATACCCAGTGATGACGAGATGCCTGACGGTCAATTCCATCAATTTCACGAAGAACCAGGACAAGCAAAATAATTCGCTTCAAAAGTCATTACATTCACATTTGATGATATTCCTTTTCACAAATGGAATGAACGCCTTGACGAATTTCATGCATGGATGACTTCTGAAGCTCTCACTTCACCGACATACATAGTCATACAACAGTTCGCCGCTCGTCTATCTGGATCACTAAAAGAATGGTGGGATTCCCTTGGAGAATACAGACATTTACAAGCTTATCAGGCTACCATTCCACTAATACTTGGTGAAATCCACAAAGAATTCATTGGTACTCCCAACCACATCAAAGATCAACTGCAAGAAGAGTATTTTACAGCAAAATATTGTTCTCTCCAGAAGAAAGACCTCGCAAAACATTTTGAAAACCAGACGAAGAGATATTATACATTGGACGGCCTTAACAACCCAAGCCTCAAACACGTCTATCTTTCATCTATCGACAATTATCTCAGTCAATAAACGAAGCTTTACATTCGAGATCAAAACCAGACGGTTGAAGAAATTTCTATTGGTCAAATCCAACAATACATCTTCAGAACGCTTGATAAACTCTGCAAACAGAAAGAATTCTGGTCAGAATTCATCGACAATTCGAAGCATCTAAAAACAGTATGTTCAAAATCCGACTTATTCATCAAATGTTCGAAGAAAAGCTCATGCTCATGCAATCGCCGCAAGAGATCACATAAGCACAGACGATTTCAAAGGAGATATCCATTCAGGCGCAAAAGATTCTTCAAGAGAAAGAAAAGCTTCAAGAAGACATCAAAATGTTTCCTCTGCCACAAAGAAGGACATTTTGCAAAAAACTGTCCCAGTAAATCCAAGAAGAAGAAGCAATATCTGATCAATTCGATATCTAACATTGCTCCTGACCTTGACCTAAATCAACACGATCTTGAATCAGTTCTATCTTATGATAGTGATGACCAAGATGCTATATGTGGATATTTTGATACTGAAGAAGAAGATTCATCCGAAGAAGAAGAAGGATGCTACAAAATCACAGAAATCCTCCAACAAGAAGATAATGTTCAGACACCTCATCTTCCCGTAACAATCTTTGATCCAGAAAAAAGGATGCGTCCAGTTCATATAATTGCCTTCATAGACACCGGAGCTCATACATCGATCATGAACCCAAAGGTCTTACCAGCATCAATGTGGCTTCCATATGATCAAGAATTCAGAGTCGCAAATGCAGGATCATTATTCATAAAAGTCAAGTCCAAACCGATTACCATTGAAGTTTTCCCAGGATGCCAGATTACAACCCAAGTGCTTGGATCCACAGAACCAGGCAAAGATATCATCCTCGGATGGGATTGTTACTATACTTTAAAAAAGAAGTTCGACATCTCCATAGAACCCCGAGGAGTTAAATGGGAAAATCCGTTCAAACCCTATACAACAATTCCAAGACTCTTTCCCATAGAAGACATCGCTTCAGCTGAGTTCGAATACATAAAAGAAGAAATAACGAAGAAATCATGTGCAGATTCACACAGTGAATTTCTCCAGAAGTGCAGCTGTCCTTTATGGTTAAACCCAACGTTTTTCGTGTCTCTTCCCTTTAAGGAAAACATCACCACTACGCCGACCAGAGCAAGTCATGCGGAGATGCCTCCAGCACTTCTACAACAAGCAAACAAAGAATGTGAGCAACTGATCCAACAAGGAATAGTCTCAGCGACGAACTCACCATGGGCATGCAAAGCTTTTTATGTCAACAAAAGAGCAGAACAGGCTAGAGGAAAATTAAGGCTAGTAATTGATTACAAGCCTTTGAACCGATTCCTCCAAAATATCACGTTCCCACTCCCAACAAGAAAGGCATTACTACAACACCTTTTCGGAGCAACAATCTTCTCAAAATTCGACTTAAAATCAGGATTTTGGCAGATCGGTGTCAAACCAGAAGAAAGGCACAAGACGGCATTCTGTTTACCAAATCGTCATCTAGAATGGAAAGTCTTACCTTTTGGTCTAAAGACAGCCCCGTCCTTATTCCAGCAAGCAATGCTACGGATATTCAAACCATTAGTCCACACAGCATTGATCTACATAGATGACATTCTCCTATTCTCCAATAGTGAAGAAGACCATATCAAAGTTTTAAAGCAGTTCCATGAACTAGTCCAAAAATATGGAATCATGCTCGCAGCAAAAAAGATGACTATAGCAAAGCTAGAGATTGAGTTCCTCGGAGTCAAGATAGCGGAATGAAGATTTACACCACAACCCCACTTGCCTACAGAATTACTCACTTTTCCCGACGAAAATCTTACAAAAAGACAAGTGCAACAATTCCTTGGAGTAATCAACTACGTCAGCGAATTTATTCCGAAGCTATCCCAATTAACACAACCACTACGAAAGCTGTTGCAAAGGAATCCCCCTCAGTGGAGTACACGACAGACTGAAGCAGTAAAAAAGTTAAAGTTAGAAATTCAAAAAATTACCACCTTTGAAAATTCCCTCTGTCGGCAAAAGAATAATTCAAACTGATGCAAGCGACAAATACTGGGGAGCAATACTGTTCGAAGAGATTGATGGAAAAAGACATATCTGTGCCTACAAGAGTGGACGTTTCAAGGAGTCAGAGATGCATTATCACTCTACGTTCAAAGAAATCCTAGCGGTCAAGAAGGCTATTGAAAGATTCGAGTTCCATTTGATAGGACATAAATTCAAAGTCGAAATGGATATGTCCTCCTTTCCAAAGATGTTACAATTCAACCAGAAGATAGTGCCACATCAGCAGCTACTTCGTTGGAGTGAATGGTTTTCGAAGTATGACTTCGACTCTGCCTATTTAAAGGGCACGACGAATATCTTAGCCGATATGCTCAGTCGAAAACCATTAAAATCGATTTTCACTATGACGAGCTACCAAGGATCTAGTTCCTCATCAAAATCTCTCTATGATTTCAACAGCAACATTCCTGAAGATGCAAAGGAGCTAATCAAAATCGGAGAAATTCATAACCGCCTTCGACAGAAAATCTTCCGCTACCAATCCATAATCTTGTCTAATCACGGAGCCATCAACAATTTCATCACACCGCTCGGTATCCATCCAGATTATCCGTTCGCTCATCTCTATAGTATCCGACACACCAATCTCCCAGAAGAAGTCATCTGCTTTCTCTGGTATTTTTGTGCGGTATATACTATTGGAATTATCTTCGATATCCCATGGTTATACCAACACATCAATTCCCAGAAATGCTTCACTAATGGTATATCAACATTCCTGAGGTGGTTCGAACCAATGAACGTTTGGAGCAGTAAACTTCGTAGTTCAGCCAAGGTACTCAACTATCCTTACAAGAAGCTAAAAGGTGCAACTACTTACAACCCATTCTTCAACCCGCATACCATTTACTTTTTTTACCGACCCGTGAACGTCAACCTAAAATCAAAGAAGATTCACGCGATGCCTACACTCATCCACCACAAAGATTTCTACAAAGGAGTCCGCCCCGACTTCAGCATGGCTGACAATGAGATTTTTGAAACTTTCCAAAATCATGCATTCCGCCTCAACAACACAATCCAGAAGTTCGCTATCCCTTACAAGCCCAATTGGTCTTTCTATGAAGTTGACTACCAAATGGACCTTGATGAAGACCTCCAGTTTTTTATGATGAAG

ID:

scaffold13|size3762591_LTR-Caulimovirus_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

425

Start:

334232  

End:

334656

Strand:

+

>scaffold13|size3762591_LTR-Caulimovirus_58

GTATGTATACCCAGACGATGGCTATAGATGTTGCGAAGAACACATGCTTGAATTTGAGATGGCCATTAGAAGCCCAGTAAGAAGTTCAGCAGGAGTAAAAATCCAGTAAAAAATAAAATAAAATATATGTTTAATTAAAATAAATGACGTCAGCAAATATGTAAGCATGACATCAATGTGTGTAGAAATATCTAAGTATGTGTAGAATATTCTATAAATGTGTAATGAGATAAACGCTGATGTAAACGGCTTAAAACCTCTCCTATAAATAAAGGTATACCCATCCATGTAAAAAAAAAAAAAAAACAAGTTTTCATTTCCCAAAAATATATTCTCTCTTTAAACTCTCATGTCTCTCTAAATTCTCTCTAAGTTTTCTAGATCTCAACATCTTCATAAACTTTGATTTCTTTTTTTCAAACACA

ID:

scaffold140|size241992_LTR-Caulimovirus_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

344

Start:

219770  

End:

220113

Strand:

-

>scaffold140|size241992_LTR-Caulimovirus_59

TTCCATTTTAATTGTTGAGGTGCAAAGGTAGCAGTTGGTGTACATTTACTATGAACCGATAGTATTGTAGTTTCTCCTTTATCGTCTTGTAATAAACATCTAGGATTAAATTCAGATGTGGATTGTTTAAAATATATTCGATATAGTAATAAATATCCATGTCTTTCATTTTGGAATTTAATTTCTGGTAAATGAACATTTAAAACTAAAGTGTTAAGTATTGTTGGATCGTGTAAACTTACCTGAAAATTGGGTGCACAATTAAAATAGATTGCTCTGTTGCATAAATTTGATTGTACTGCTCCTAAGAGCGAATCTTCGAATTTTAGTAAGGTTTTATCCCT

ID:

scaffold140|size241992_LTR-Caulimovirus_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2138

Start:

220109  

End:

222246

Strand:

+

>scaffold140|size241992_LTR-Caulimovirus_60

TCCCTCGAGAGCTTCTTTCTCGGAATATCGTACTGGCCGATTTAGTACAGAATCAGATACTGAAAGTATAAACCAAAAAATTAAACAAGATAATTCAATTAAGTTTAAAGCATCTATAGCTGAACCAGAACAAGATGTGTATCCTACATCTCCTACACCATCAGATTTTAAATCAATAAATAATATAAATAAAGAATTCACGATCAATAAACAATATCTTAAAGAAGAATTTTATTCAATAGAAAATAACGAAAAAAGAAAATGGTATTTTAAAATATTTTCTAATAATTAAACGACTAAATTTAGAGAAATTTGGTATGAAATTATGACAATAAAAGAAGTAACTATTCCATTTTTTTTGGTTTGAAACGTATTCAATCGAAAATAATATCCATTACCCTTTCAAATCAATAAACACTAGTTCAATTTTAAGTCAAGTCTGGGAACAAGTAGATGGAAATAAAGTTAAAACAATCCATCCACAATTAAAAGATTTAAAAATAAATACTACAAATCGGCAAATTATTGCCACCCCCTTTAAAACTGGAGCTAATAGATAAGATAAAGAATCAGTAATTGTAAGTAATATTATACCCATATATCAACAAAATAATTTCCAAAGCCAACTACTCTATACAATATCTAAGCAAGTAGATCACATAGATAATAAATTAAATCTCAACGAATCAAAAGAAGTAAATCATTATAATAAAAAAATATTCAACACCCCTTTTCAACTACTTGCACTCTAATATTTAAACCAATAACTAGACCAGTAAAATTTTCAGATAACGAAATTCTAAAAACAATAGCATCAAAATTAGATAAATTAGATAAAGGAAAAAGGAATAAATAATATAGACGAAAATGATAATGAATCTATTCAATCATCTATCCAATGAGATAATGAGATTCAAGAAATAAATCGTATAAAAATAAAATAATGAAATCCAATAAACCCTATTACAAAAAAACATTCTCCACCTGACTTATTATTTGAAGAACACCATAATTATTCTAACAATATATATACCGGTGAAGGTATATATGAATGGAATATTGATGGACGTTCAGAATATGAAATAATGAATTTTATTCAAGAAATGGGTATGGCGGCAATAGCCTATAAAGCTAAAGGTAATACTGATAAGCAAGCATGTGTCCTATTAATTACCGGGTTTAATGGAGCATTAAAATATTGGTGGGATAATTCATTAGATGTAGTCACGCAAGATTCAATTATAAATCACGTTGAAACAATAAGAATAGAAAATGAAGAAGGCTTTTATGAAGAACAAGAAAAACAAAATATTGTAGAAGTATTAATTCATACTATAACTATGCATTTCATAGAAAATCCACCAGAAGAATTAGAAAGTAAAAAAATTGTACTAACAAATTTAAGATGCCCAACATTAGGCGATTTTAAATGGTACAATGATATATTTGTAACCAATATATTTCAAAGGCATGATTGTAATCAATCTTTCTGAAAAGAACGGTTTATCTCTGGATTACCGTTTTTTTTTGCAGAAAAAACTAATCAACAAACTAAAAGATTATTCCGGTGGACAACCAATTCCCTGGAATACCATAACATATGGACAATTATTTGCATTTGTTAAAAAGAAAGGATTATCAATATGTCAAAAACACAAAGATAAAAAACGAAACAAAAATTTTAAATTCAATTTAACTATGGGTTCATTCTGTGAACAATATGGTTATAATAGGCTTAATCCACCCTCTAGTATAAAACGTATACAATATAAACAAAGAAACAATAAATACCATAAAAAACATAAACAATATAATCAACAACCAAATAATAAATATTATTGTAAAACAAAAAATTATCCAAAAATTATAAATCAAAACAAAAATTAGTTTGCTGGAACTGTAAAAGACATGGCCATACATCTAAAGAATGTCAAATGAAAAAGAAAATCAATGAGATTTTTCAAGATCAACTTGATATACAAGAAAAATTAACTAAATTATTATTATCCGATTCAGAATCATCTAGTGAAACAGAAAGCAATTATTCAATAAATGATATAGAAAATTCTAATGACTCTTCTACAGAATTTCAAGAATTATTAGTTAATCTATGTAATTGTAAAATGATTAATGTTATA