Boechera retrofracta (v1.0)
ID:
scaffold7|size4355475_LTR-Caulimovirus_621Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
82Start:
763991End:
764072Strand:
+>scaffold7|size4355475_LTR-Caulimovirus_621
ATCATCCACCTATAAATATGTGTACCTCTTTTTGTAATCCACAATTTACATCCACAAAGTAATATAATTCTCCCTCATGAGT
Boechera retrofracta (v1.0)
ID:
scaffold7|size4355475_LTR-Caulimovirus_622Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
90Start:
764070End:
764159Strand:
->scaffold7|size4355475_LTR-Caulimovirus_622
AGTGAGCTGGTCGCACTTTTCGTTTGCTTGTTGTAGCAACACTGGAGGCATTCAAGCATGATTCGTCTTTGTTGGTGTGGTAGTGACGTT
Boechera retrofracta (v1.0)
ID:
scaffold7|size4355475_LTR-Caulimovirus_623Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
84Start:
764171End:
764254Strand:
->scaffold7|size4355475_LTR-Caulimovirus_623
CGAGTGCATAGTATCTTTTTGTTGTTTGCTTTTCAAAGTGTTTTGCCAAATCTTTTTTCTTCGGGGAACAATATTTTACTGCAA
Boechera retrofracta (v1.0)
ID:
scaffold7|size4355475_LTR-Caulimovirus_624Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
174Start:
1814826End:
1814999Strand:
->scaffold7|size4355475_LTR-Caulimovirus_624
CAAATGAGAGACCTCAGACCTAAACATAATGACAAAGTCATATTTACAGACAAGAAAGAATTTAGATTAGAAAAACATACGTAGACACTAATTCTCAGTCATAGCTCAACCACTGTTAGAAATTTTCCCTAATGAAAGTTGCACTGATTGTCGTATTGTTTAGATCGGAGATTC
Boechera retrofracta (v1.0)
ID:
scaffold80|size432629_LTR-Caulimovirus_625Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
105Start:
315613End:
315717Strand:
+>scaffold80|size432629_LTR-Caulimovirus_625
TGTCAGCTATATGTAAGCATGACGTCAACATTAGTAGAAATATCTAGAGTGTGTATGAGGTAAACGTTTACGTAAGCGACCTTATCCTCCCCTAGGTAAAAATGT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_626Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
228End:
618Strand:
->scaffold828|size7559_LTR-Caulimovirus_626
TACTTTTTATAAATACAAAATTCTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATGTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTATCCTCTTATGGTGTCGACAGTTAGATTACATTGTTGCCTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCACTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_627Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
633End:
1023Strand:
->scaffold828|size7559_LTR-Caulimovirus_627
TACTTTTTATAAATGCAAAATACTATTTTAAAATTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAACTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCGCTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_628Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
388Start:
1038End:
1425Strand:
->scaffold828|size7559_LTR-Caulimovirus_628
TACTTTTTATAAATGCAAAATACTATTTTAAAATTTGAAATTTACAAAGATTGTTTGAAAACAGTATCGAATAAAACTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTAAGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGTCAGCTAGTGGGTC
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_629Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
1848End:
2238Strand:
->scaffold828|size7559_LTR-Caulimovirus_629
TACTTTTTATAAATACAAAATTCTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCGCTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_630Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
387Start:
2253End:
2639Strand:
->scaffold828|size7559_LTR-Caulimovirus_630
TACTTTTTATAAATGCAAAATACTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTACTTGGTAGTTTAAAAACTTACAAGGATTGTTAACGATAACAATTTTTGAAAACTTAAAGATTTTTAGAGAGAGAAGGTGGAGAGATTTTTAGAGAGAAAGTTACGTGAAAATCGCTCGTGCCTCCTTCGTTGGTAGAGTTCAGTATTTATAGGGGAAGCTGAGTGCTTGCTTGCGTCATTGTTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGCCGACAGTTTGATTACATTGTTGCTTACGTCCTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGTCTGCTAGTGGGTC
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_631Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
2657End:
3047Strand:
->scaffold828|size7559_LTR-Caulimovirus_631
TACTTTTTATAAATACAAAATTCTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAACTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCGCTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_632Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
387Start:
3062End:
3448Strand:
->scaffold828|size7559_LTR-Caulimovirus_632
TACTTTTTATAAATGCAAAATACTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTACTTGGTAGTTTAAAAACTTACAAGGATTGTTAACGATAACAATTTTTGAAAACTTAAAGATTTTTAGAGAGAGAAGGTGGAGAGATTTTTAGAGAGAAAGTTACGTGAAAATCGCTCGTGCCTCCTTCGTTGGTAGAGTTCAGTATTTATAGGGGAAGCTGAGTGCTTGCTTGCGTCATTGTTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGCCGACAGTTTGATTACATTGTTGCTTACGTCCTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGTCTGCTAGTGGGTC
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_633Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
3466End:
3856Strand:
->scaffold828|size7559_LTR-Caulimovirus_633
TACTTTTTATAAATACAAAATTCTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAACTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCGCTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_634Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
387Start:
3871End:
4257Strand:
->scaffold828|size7559_LTR-Caulimovirus_634
TACTTTTTATAAATGCAAAATACTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTACTTGGTAGTTTAAAAACTTACAAGGATTGTTAACGATAACAATTTTTGAAAACTTAAAGATTTTTAGAGAGAGAAGGTGGAGAGATTTTTAGAGAGAAAGTTACGTGAAAATCGCTCGTGCCTCCTTCGTTGGTAGAGTTCAGTATTTATAGGGGAAGCTGAGTGCTTGCTTGCGTCATTGTTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGCCGACAGTTTGATTACATTGTTGCTTACGTCCTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGTTCAGCTAGTGGGTC
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_635Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
391Start:
4275End:
4665Strand:
->scaffold828|size7559_LTR-Caulimovirus_635
TACTTTTTATAAATGCAAAATTCTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAACTTTTATTTGGTAGTTTAAGAACTTACAAGGATTGTTAAAGATAACAGTTTTTGAAAACTTAAAAATTTTTAGAGAGAGAAGGTTGGAGAGATTTTTAGAGAGAGAGTTGCGTGAAAATCGCTCGTGCTTCCTTCGTTGGTAGAGTTGAGTATTTATAGGCGAAACTGAGTGCTTGCTTGCGTCAATATTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGTCGACAGTTAGATGACATTGTTGCTTACGTCTTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGGCCCGCTAGTGGGTCTTT
Boechera retrofracta (v1.0)
ID:
scaffold828|size7559_LTR-Caulimovirus_636Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
345Start:
4680End:
5024Strand:
->scaffold828|size7559_LTR-Caulimovirus_636
TACTTTTTATAAATGCAAAATACTATTTTAAAACTTGAAATTTACAAAGATTGTTTGAAAACAGTATAGAATAAAGCTTTTACTTGGTAGTTTAAAAACTTACAAGGATTGTTAACGATAACAATTTTTGAAAACTTAAAGATTTTTAGACTCGCTCGTGCCTCCTTCGTTGGTAGAGTTCAGTATTTATAGGGGAAGCTGAGTGCTTGCTTGCGTCATTGTTTACATCAATATGTTGCTACGTGTTGTCCTCTTATGGTGCCGACAGTTTGATTACATTGTTGCTTACGTCCTTGCTACGTGTCGTCTCCTTATGGTGTCTTCTTGTGGTTCAGCTAATGGGTC
Boechera retrofracta (v1.0)
ID:
scaffold8|size4582595_LTR-Caulimovirus_637Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
286Start:
4370405End:
4370690Strand:
->scaffold8|size4582595_LTR-Caulimovirus_637
TTATAGATAAACAAAAGAGAGATCTCAGATCTATACGTATTGACAAAGTCGTGTCGACACACATGAGGGATTTCAGATAAACGGAGCATACGTAGGCGCTAACTTTCAGCCATGGCTGAACCACTGTTTAAAATTTCGCCTCATGAAAGCCGTAATGTATGTCGTATTGTCTAGATCACAGACTTTACAATACTTATCTAAACCTAATAATACTTTGATCGCTTACTTGTGTATGAAAGAGTGAAACAAAGTTTATGAAGATCTTTGAGCTCTAGAAAACTAGAGA
Boechera retrofracta (v1.0)
ID:
scaffold92|size519399_LTR-Caulimovirus_638Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
91Start:
252636End:
252726Strand:
+>scaffold92|size519399_LTR-Caulimovirus_638
ACCCTTCGCTTATGACTCATTGTTACGGTTGATGTTCCAGGCCGCAAGTCCTCGGTGAAGGCAGTAAGACCGTTGGCAAGTTACCTTTATG
Boechera retrofracta (v1.0)
ID:
scaffold9|size3886705_LTR-Caulimovirus_639Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
112Start:
898506End:
898617Strand:
+>scaffold9|size3886705_LTR-Caulimovirus_639
TCTATCCAAGATCCATTTGAATAAATAAATTAAAAAAAAAAAGGTAATTATGATGTATATATTTCGTATTTTTATCATCGTATATTCTAGTAGACTCTGTATATTATTTGTT
Boechera retrofracta (v1.0)
ID:
scaffold9|size3886705_LTR-Caulimovirus_640Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-CaulimovirusLength:
126Start:
2851331End:
2851456Strand:
+>scaffold9|size3886705_LTR-Caulimovirus_640
TTTTTAATAGTGGTTGAGTTATGACCAAAAATTACCTTCGATGCTTCTTTTACCTGATATCCCTCTTGTCTGTTAACACGACTTAGTCAATACGGTTTTATCGCGAAATATCTCCTTTATGTATCT