ID Class Order Superfamily Length Start End Strand View
A01_SINE-tRNA_41 RetrotransposonsSINESINE-tRNA16751372445137410-
A01_SINE-tRNA_42 RetrotransposonsSINESINE-tRNA24852194285219675-
A01_SINE-tRNA_43 RetrotransposonsSINESINE-tRNA16752488845249050-
A01_SINE-tRNA_44 RetrotransposonsSINESINE-tRNA9353130545313146-
A01_SINE-tRNA_45 RetrotransposonsSINESINE-tRNA21453468735347086-
A01_SINE-tRNA_46 RetrotransposonsSINESINE-tRNA30453658645366167-
A01_SINE-tRNA_47 RetrotransposonsSINESINE-tRNA13154226885422818-
A01_SINE-tRNA_48 RetrotransposonsSINESINE-tRNA11454409175441030-
A01_SINE-tRNA_49 RetrotransposonsSINESINE-tRNA24954864105486658-
A01_SINE-tRNA_50 RetrotransposonsSINESINE-tRNA23254965635496794+
A01_SINE-tRNA_51 RetrotransposonsSINESINE-tRNA16257342475734408+
A01_SINE-tRNA_52 RetrotransposonsSINESINE-tRNA28157381265738406-
A01_SINE-tRNA_53 RetrotransposonsSINESINE-tRNA14858080845808231+
A01_SINE-tRNA_54 RetrotransposonsSINESINE-tRNA14258170415817182+
A01_SINE-tRNA_55 RetrotransposonsSINESINE-tRNA17458247035824876-
A01_SINE-tRNA_56 RetrotransposonsSINESINE-tRNA20958585105858718+
A01_SINE-tRNA_57 RetrotransposonsSINESINE-tRNA10161959886196088-
A01_SINE-tRNA_58 RetrotransposonsSINESINE-tRNA25263086166308867-
A01_SINE-tRNA_59 RetrotransposonsSINESINE-tRNA9063494366349525-
A01_SINE-tRNA_60 RetrotransposonsSINESINE-tRNA9664979746498069+

< 3 4 5 6 7 > Total 151


Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_41

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

5137244  

End:

5137410

Strand:

-

>A01_SINE-tRNA_41

GAATTATACAGAGGTATCCTGGCCCCACATAAGTGATCCAGACCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCCCTAGTGGCCGGAATTAAAACCTAGGTGGCGGTACTCACAGCTGTAAGCCCTTTACCACTAGAGCTAGAAGCCCCAGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_42

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

248

Start:

5219428  

End:

5219675

Strand:

-

>A01_SINE-tRNA_42

AATATCTGATTAATTATATGCATTCCATCGATGAAGAATATTATATAGATGAATATATCCGATAATTTTACCGCCATATGAAAATACACATCTGACTGCGCCATTCTGAATCATCCTATGAGATCCATGTTCGATGATACGTCATTCACCATGCTGAAGATCTTTTGTAACAATATTTTTTATAATCTGCATAATTTGTATTTTCTGGAGTTTGAACCCCAAACTTCCTAGTGTAAAAGCATTAATGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_43

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

167

Start:

5248884  

End:

5249050

Strand:

-

>A01_SINE-tRNA_43

GATAAATCCTATTGGTTATCCGGTCGGTCTGGGAGGAACACACTTAGTGATACAGAGTGGATTAGTCCGAAAGCGTATCATATTGCATGACCCAAGTTTGAATACTTTTTGACTATTGCGAGAGGAATGAACCAATCGTCGTGTAAATCACTTGAGCCGAAATCCAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_44

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

93

Start:

5313054  

End:

5313146

Strand:

-

>A01_SINE-tRNA_44

TGCTGAAGATCTCTTATAACCTTTTTTTTCCCCATAATCTGGTAGAAGCATTAATGAATACTTAGTCAAACCAATGTACTAAGGGACTTCCAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_45

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

214

Start:

5346873  

End:

5347086

Strand:

-

>A01_SINE-tRNA_45

AACGTTGATTGTGATATTATAAATTATAAAAAAAATTGTGCTGAAATTTTTACAACCGACAATTATAATCATGTCTGATTTTAAATCTTGAATCATCAAATGAAAATTCTCTCTTGCTAATTTTAATTGCATCATAGATTTTTAATAATTTTTTTATTAATTTGCATAATTATTTAATAAATTGTTTTCTCCAGTACCCCAAATCTTAATCTCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_46

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

304

Start:

5365864  

End:

5366167

Strand:

-

>A01_SINE-tRNA_46

GAACGATTACATAGACGATTCGACAACCGATAATACTACCTGCCTTATGAAGACCTACGTCTAACTGCATCATCTGAGCCGTTCTATGAAGATCCACGCATGACCAGATTTACTTGCACCATGTTGAAGATCCCTTGCAAGCTTTTCCTCTGTAGTCTGCATAATTGTTTAATAAACCGCTTTCTCCGGGACTTGAAACCTGGATTTCCTGTAATCTGCAATAAATTGCATAGTCTGGGATTCGAACCCCAGACCTAGGTGTAGAAGCCTTTAAACCTTAACCAATAGGTTACGGTGCTTCCAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_47

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

131

Start:

5422688  

End:

5422818

Strand:

-

>A01_SINE-tRNA_47

GAATTATACATGGGTATCTTGGCCCCACATAAGTGATCCAGACTAGTCACGTGTTGACACGTGTCGGTCACCTGTTTCTGGCGATGCCAAAATGTTAATTCTTTAGTAGACGAGATTCGAGTTCTGGTGAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_48

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

114

Start:

5440917  

End:

5441030

Strand:

-

>A01_SINE-tRNA_48

GGGGTCCAGCGCCCCAACGGAAGGGATGTTAAATCCGTTGTGGCCAAGACTCGAACCCGGGTGACGGGCAGTACAGCTATACCTCCTTTACCACCAAGCTACGAGCGCTTGGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_49

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

249

Start:

5486410  

End:

5486658

Strand:

-

>A01_SINE-tRNA_49

AACGCTGATTTATTATAATTTTACAATTATGATATGAGAAATATTACATAGATGATTCGACAACATGTTAAAGATCCCATGTAAGCCTTTATTCCGTAGTCTGCATAATTGTTTAATAAATTGCTTTCTCCGAGACTTGAAACCTGGATGTCTTGTAATCTACAAATAAATTATATAGTCTGAGATTTGAACCCTAAATTTAGATGTAAAAGTCTTTAAACCTTAACCATTAGGCTAAGGTGTTTCCAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_50

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

232

Start:

5496563  

End:

5496794

Strand:

+

>A01_SINE-tRNA_50

CACATCAGTTTTGGGTAGGATTTTTTTCGGAAATTAAATTATCAATATTTGGCTAATTTGGACTTAGATTTTGACCCAAGTATTTTACATGATGGACCATAACAGATAAGCGGTCTATCTCTAGAATTAGTCGAAAAATATTTCAAACTCGATCAGACAGTGTGATACGCTTTTGGATTAGTGTACTATGTAATACTTAGTTTGTTTTTCACGGGACCAACCAGTTTAACCG

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_51

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

5734247  

End:

5734408

Strand:

+

>A01_SINE-tRNA_51

AACCAATCGCTCGTAGCTTGGTGGTAAAGGAGGTACAACTGTACTGCCCGCCACCCGGGTTCGAGTCTTGGGCACAACGGATTTAACATCCCATCCGTTGGGGTGCTGGACCCCTTTCGGGGGGATAGTTGGGATTGTGGCTGCCCAGATACCAGAGTTATC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_52

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

281

Start:

5738126  

End:

5738406

Strand:

-

>A01_SINE-tRNA_52

CCCTATCGACTGATTTGGTCGATTTTAGAAGGGATAAACTTAGTGCTATAGAGTAGATTGGCTACCACATTGCATGACCCGACTTTGGAATACCTTCCGACTAATGTCAAGTAATGAACCGATCTGTTACGATCCACCTTGTAACCACTTGAACCGAAATCCAAATTCAGACTGGCCAAATGATGATAATTTTGTTCCCAAAAAAAATCGAACCTAAAACTGATGTGGGTACAAAAAGTCCTAAGAGATTTCCACTAAATTACCAAGTGGATCACTTGGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_53

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

148

Start:

5808084  

End:

5808231

Strand:

+

>A01_SINE-tRNA_53

TGGAAGCCTCCTTGACCCAGTGGTTTTACCAAATGTCTATTAATGCTTTTACACTAGGAGATTTGAGTTTCAATTCCCATCAAATACCGTTATGCAAAATATTTGAGAAAAAACTTACCAGAAATCTTTAATATAGCGCAAAAAGTAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_54

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

142

Start:

5817041  

End:

5817182

Strand:

+

>A01_SINE-tRNA_54

ACCATAGGTCATTAACTCAACTGGAAAGGGATCTGATCATTGTGTCGGAGGTCTCCAGTTCGAGTGACCACTGAAACGAAACTAATATTACATTGGTTTCGGGCCTGGGGGTTTACGGCTTCGGCCCGAACCTCTTGGTATT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_55

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

174

Start:

5824703  

End:

5824876

Strand:

-

>A01_SINE-tRNA_55

GATAAATTCTATCGGCTGATCCGGTTGACCTCGAGAAGAACATACTTAGTACTACAGTGGACTGACTACCATACTAATACTAAAGGATGAACCGATCATCTGTTACGATCCCCCATGTAAACCACTTGGACCGAAACCCAAATCCAAACTGGCTAATGGATGATAATTTAGTTC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_56

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

209

Start:

5858510  

End:

5858718

Strand:

+

>A01_SINE-tRNA_56

TGGAAGCCTCCTTGACCCAGTGGTTTTACCAAATGTCTATTAATGCTTTTACACCAGGAGATTTGAGTTTCAATTCCCATCAAATACCGTTATGCAAAATATTTGAGAAAAAACTTATCAAAAATCTTTAATATAGCGCAAAAAGTACAAAATTTATCGGCTGTCATATGTCCATGTAATATTTCTTGTAGTTGTAATGGTATAATTGA

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_57

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

101

Start:

6195988  

End:

6196088

Strand:

-

>A01_SINE-tRNA_57

CTATAGGCCGATCCTCCGGTTAGTCACAGAAAGAACTTATTTAATTATACAGAGTGGATTGGCTACCACACTGTGTGTACCGAATTTGAAATGCCAGTTCC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_58

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

252

Start:

6308616  

End:

6308867

Strand:

-

>A01_SINE-tRNA_58

GTCAATTGTAATATTATAAACTACAAGAAACATTACATAGATAATATTGCATCCGACAATTCTACATACCTCACGAGGATTCATATTTAACTGCATCATCTCCGAAGTTGTCGTATGAGATCCATTCATAACAGTATTGTTTGTGTCATGATGAAGATCTCTCTGGTAAGTCTTTTGTCTTTGCTGAAAATCGAAAACTATATTTTTCCGTGTAAAAACATTATCAAACCACTGGACCAATGGGGTTTCCAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_59

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

90

Start:

6349436  

End:

6349525

Strand:

-

>A01_SINE-tRNA_59

AACATCTGACTAATTATGTGATTATAACATTGAGAAATATTACATAGACGATTTTACAACCGATAATTCTACTACCATATGAGAATGCAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_60

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

96

Start:

6497974  

End:

6498069

Strand:

+

>A01_SINE-tRNA_60

GCACCACCGGAGACCGAAGACAATTCACGGTGACCCACATGATGACCAGCGCAAGCTAGGTCTTTGATCACTTCGGTCTCTAGTCTGGACAACCTC