ID Class Order Superfamily Length Start End Strand View
A10_SINE-tRNA_3001 RetrotransposonsSINESINE-tRNA1682010189520102062+
A10_SINE-tRNA_3002 RetrotransposonsSINESINE-tRNA2802019693820197217+
Scaffold0202_SINE-tRNA_3003 RetrotransposonsSINESINE-tRNA1799638596563-
Scaffold0546_SINE-tRNA_3004 RetrotransposonsSINESINE-tRNA1818971589895-
Scaffold0559_SINE-tRNA_3005 RetrotransposonsSINESINE-tRNA18170837263-
Scaffold0755_SINE-tRNA_3006 RetrotransposonsSINESINE-tRNA28445284811+
Scaffold0923_SINE-tRNA_3007 RetrotransposonsSINESINE-tRNA1981062410821+
Scaffold0942_SINE-tRNA_3008 RetrotransposonsSINESINE-tRNA1812137221552+
Scaffold1090_SINE-tRNA_3009 RetrotransposonsSINESINE-tRNA1821331313494+

< 147 148 149 150 151 > Total 151


Brassica rapa (Chiifu_V3.0)

ID:

A10_SINE-tRNA_3001

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

168

Start:

20101895  

End:

20102062

Strand:

+

>A10_SINE-tRNA_3001

AACCGGGGCTTCTAGCTCTAGTGGTAAAGGGCTTACAGCTGTGAGTACCGCTACCTGGGTTCGAGTCCCGGCCACTGGAGAATTAACATTTCGGTATCGCCAGGGACAGAGGACCGACACGTGGCAACACGTGACTAGTCTGGATCACTTCTGTGAGGTCAGGATACC

Brassica rapa (Chiifu_V3.0)

ID:

A10_SINE-tRNA_3002

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

280

Start:

20196938  

End:

20197217

Strand:

+

>A10_SINE-tRNA_3002

CTCTTTATTCCAATGGTTTAACTAAATGTTCATTAATGCTTTTACACCATCAAGTCTATGATTTAATTTCTGGAGAAAGCGATTTATTAAACAATTATGTAGGCTACGGAGGAAAGACATACAAGAGATCTTCAACATGGTGCAAATAAACTCGGTCAGGCGTGATCTTCATAGGACAGGTCAGACGTACGTAGATATTTATAAGGCATGTAGTATTATCAATTGTCAGATCGTCTATATAATATTTTTCATAATTGTAATGTCATAATAAATCAGCCTT

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0202_SINE-tRNA_3003

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

179

Start:

96385  

End:

96563

Strand:

-

>Scaffold0202_SINE-tRNA_3003

GAATTATACAGAGGTATCCTGGCCCCACAGAAGTGATCCAGACTAGGCACGTGTTGCACGTGTCGGTCCTCTGTCCCTGGCGATGCGAAATGTTAATTCCCCAGTGGCCGGGATTCGAACCCAGGTGGCGGTACTCACAGCTGTAAGCCCTTTACCACTAGAGCTAGAAGCCCCGGTTA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0546_SINE-tRNA_3004

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

181

Start:

89715  

End:

89895

Strand:

-

>Scaffold0546_SINE-tRNA_3004

GAATTATACAGAGGTATCCTGGCCCCACAGAAGTGATCCGGACTAGGCACGTGTTGCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCCCTAGTGGCCGGGATTTGAACCCAGGTGGCGGTACTCACAGCTGTAAGCCCTTTACCACTAGAGCTAGAAGCCCCGGTTA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0559_SINE-tRNA_3005

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

181

Start:

7083  

End:

7263

Strand:

-

>Scaffold0559_SINE-tRNA_3005

GAATTATACAGAGGTATCCTGGCCCCACAGAAGTGATCCAGACTAGGCACGTGTTGCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCCCTAGTGGCCGGGATTCGAACCCAGGTGGCGGTACTCACAGCTGTAAGCCCTTTACCACTAGAGCTAGAAGCCCCGGTTA

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0755_SINE-tRNA_3006

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

284

Start:

4528  

End:

4811

Strand:

+

>Scaffold0755_SINE-tRNA_3006

GCGGAAGCGCCCTTAGTCCAATGGTTTGACTAAGAGTTTATTAATGCTTCTACACCAGGAGGTCTAGGTTTCGAATCCCAGCAAAGGCGAATTATGCAGATTTATGGAGAAAAGCATATAGGAGATCTTCAGCATGGCGCAAGGAGTACCGTCAGACATGAATCTCATAGGACAGCTCAGGATGATGCAGTCAGGCGTGAATCTTCATCAGGCAGATAGAATTGCCGGCTATAGAATTGTCTAGTAATATTTTTCATAGTTTGTAATACCATAATTAACCATCG

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0923_SINE-tRNA_3007

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

198

Start:

10624  

End:

10821

Strand:

+

>Scaffold0923_SINE-tRNA_3007

TAACCGAGCTTCTAGCTCAGTTGGTAAAGGATTCACGGCTGTGAATTCTACCAGTCGGTTCAAATTCCGACAACTGGGAAATTCACGTGCAGAACTCTAGCATCCGAGACCAAGACTGTTCACGGTGATCAGCGCAAGTTAGATTCTTAGTCGGTCTCAAATCTAGACCACTTCGATGAAGCCAGGACATTCGGTTAT

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold0942_SINE-tRNA_3008

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

181

Start:

21372  

End:

21552

Strand:

+

>Scaffold0942_SINE-tRNA_3008

TAACCGGGGCTTCTAGCTCTAGTGGTAAAGGGCTTACAGCTGTGAGTACCGCCACCTGGGTTCGAATCCCGGACACTGGGGAATTAACATTTCGGCATCGCCAGGGACAGAGGACCGACACGTGGCAACACGTGCCTAGTCTGGATCACTTCTGTGGGGCCAGGATACCTCTGTATAATTC

Brassica rapa (Chiifu_V3.0)

ID:

Scaffold1090_SINE-tRNA_3009

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

182

Start:

13313  

End:

13494

Strand:

+

>Scaffold1090_SINE-tRNA_3009

CCGGGCCTCGTGGTCTGGTGGTAAAAAAACCTCGGATGAGGTGTCCGCCATCATGAGTTCGAGCCTCCGCCACAGCGGATTTAACATGGTTTCCGTTTGGCCTCCAGGACCTTCCTCGCCAGTTCCGGTTGGACGCGATGGGATAGTCGGACTAAGTGAGAGGTCTGGATACCTGGATTATC