ID Class Order Superfamily Length Start End Strand View
A01_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA15627155302715685-
A01_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA11027894942789603-
A01_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA19629712682971463+
A01_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA20833650983365305+
A01_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA20136992263699426+
A01_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA34538060333806377+
A01_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA14140377374037877+
A01_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA29341835034183795+
A01_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA27942800744280352+
A01_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA9742806254280721+
A01_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA10942917544291862+
A01_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA18043111254311304-
A01_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA8446813304681413+
A01_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA29346951614695453+
A01_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA18247163674716548-
A01_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA18247239204724101-
A01_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA33549623684962702+
A01_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA28249696694969950-
A01_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA16151195735119733+
A01_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA19251349425135133+

< 2 3 4 5 6 > Total 151


Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

156

Start:

2715530  

End:

2715685

Strand:

-

>A01_SINE-tRNA_21

GAACGCATTTAGTGCTACAGAACAGATTAGTTCGGAAACGTATCATACTGCCTGATCCAAATTTGGAATATCTTTCAATTAATGTTAGGATGGACCGATCATTTGTTACGACCCATTATATAAACTACCTGTATTTAAACCCAAGTCTAAACTGAC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

110

Start:

2789494  

End:

2789603

Strand:

-

>A01_SINE-tRNA_22

ACAGAAGTGGATCCAGATTAACCACATGTTAGCAGCATACGTTCGGTTCCTTATTTTAGGTAATAACAAAATGTTAATTTCCTAGTAGGCGTGACTCGAATCTTTATGGC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

196

Start:

2971268  

End:

2971463

Strand:

+

>A01_SINE-tRNA_23

TTAGCTCTGGTGGTAAATATGGCTCACAACTCATTTGGGTTTGAATCACGGCCACTGAGAAATTCACATGCAGAATCCCGGTGCCGAGACCGAAGACCGTTCACGGTAATCCACATGGTGACCAGTGCAAGCTAGGTCCTTAATCGCTTCGGTCTCTAGTCTGGACCACTTCGGTAGGATCATGACACTCGGTTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

208

Start:

3365098  

End:

3365305

Strand:

+

>A01_SINE-tRNA_24

CGAGTTGGACTAGTGGTCTTGAGGGAGATTCGGCCCCGATACGGATTCGGCTTCGATTCACGTTGGCCACCAGGGAATTTACATGCGGACTTGCTCTAGCGTCCAAGACCGAACACCGCTGCCTGGCCATGACCCACCCTCGGGTGAGCGCCGCTAAGGATTCGGTCTCTAGTCTGGACCACCACGGTGGAACCAGGACACTCGGTTA

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

201

Start:

3699226  

End:

3699426

Strand:

+

>A01_SINE-tRNA_25

ATTACCACTACTTAGTTAGTATGGGCTTGAGTTTTAGCTTAAATGGTTTACATAGCAGATCGTAACAAACGATCGATTCATCTTAGACAATAGTCGTAAGGTATTTTAAATTCGAGACAGTGTGATACGTTTTGGAGTAGTATACTCTGTAGCAGTAAATACGTTGCTTCAAGAGCTTATCGGATAGTCGATAGGGTTTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

3806033  

End:

3806377

Strand:

+

>A01_SINE-tRNA_26

GTGGAAGCACCGTAGCCTATTGGTTAAGGTTTAAAGGCTTCTACACCCAGTTCTGGGGTTCGAATCCCAGACTATGCAATTTATTGCAGATTACAGAAAATTCAGGTTTCAAGTCCCGGAGAGATCGGTTTATTAAACAATTATGCAGACTACAGAGGAAAGACTTACAAGAGATCTTCAACATAGTGCAAATAAATCTAGCCAGGTGTGGATGGATCTTCATAGGACGGCTCAGGAGATGCAGTTAGACGTAAGTCTTCATAAAACAGGTAGTATTGTCGGTTGTCGAATCGTCTATGTAATATTTTCTATATCATAATTGTAAAATCGTAAGAAATTAGCGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

141

Start:

4037737  

End:

4037877

Strand:

+

>A01_SINE-tRNA_27

GTAATTAGTTCAACTTGAAAGGATCTCTGCCATTGTGTAAGAGGTTTCTATTTCGAATAACCGCTGGGATAATTAATATTACATGTTGTGGTTTCGGACCTAAAAAGATTATGAGCTTCCGTTCCGAATCTTCTACTATTC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

293

Start:

4183503  

End:

4183795

Strand:

+

>A01_SINE-tRNA_28

AACCAAATAGTGATAGATTAGTGATAATCTTTTAGAGTTTGGTATGTATCCACGTCAATTTTGAGTTTCATTTTTCTTAGAAATTAAATTATCACTACTTAATTAATATGAGTTTAGGTTTCAGCCCAAATGGTTAACATGATAGACCATAACAAATGACCGGTTCACCCTTAACATTAGTCAGAATCATAAAATATTCCAAACTCGAATTATGCTATATGGTACGTTTTTGAAGTAGTCCACTCTGTAAAATTAAATGTGTTATTTCCTCAATCTGCCGGATCAACCAATAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

279

Start:

4280074  

End:

4280352

Strand:

+

>A01_SINE-tRNA_29

AATCGAGTGGTGGTAGTCTAGTGATAATTTCATGGAACATGTGTACAGTTCTAAGTTTGATTTTTCATAGAGATTAAATTTTACTCTTTGGTCAGTCTGCACTTGAATTTTTGTCCAAGTAGTTTACATTGTGGATCACATATAATCGGTAGACCTCCGCATTAACCAGAAAGTATTTTAAATTCGGGTTAGAGAGTATGGTATGCTTTCGGAGTAGTTCACTCTCTAACACTAAGTGCGTTCTTTCCAGAGCCGACCGGATCAGCCGATAGAATTTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

97

Start:

4280625  

End:

4280721

Strand:

+

>A01_SINE-tRNA_30

GGATCAGACAGTATGGTACGCTTTCGAGATAGTCCACTTTGTAGCACTATAAATGTATTTTTTTCCGAGATCGACCGGATCAACCGATAGGATTTAT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

109

Start:

4291754  

End:

4291862

Strand:

+

>A01_SINE-tRNA_31

GTGGAAGTTCCATTGGTCCAGTGGTTTCACCAATGATTCATTAATGATTCTATACCAGGAGATCTGCGTTTTGATCTTCATAGAAAACAAAATTAATTATGCGAATTAA

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

180

Start:

4311125  

End:

4311304

Strand:

-

>A01_SINE-tRNA_32

GAATTATACAGAGGTATCCTGGCTCCACATAAGTGGTCTAGACTAGTCACGTGTTGCCACGTGTCGGTCCTCTGTCCCTGGCGATGCCGAAATGTTAATTCTCCAGTGGCTGGAATTCGAACCCAGGTGGCGGTACTCACAGTTGTAAGCCTTTTACCACTAGAGCTAGAAGCCCCGGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

84

Start:

4681330  

End:

4681413

Strand:

+

>A01_SINE-tRNA_33

GTGGAAGCCCTAGGTCTAGTGGTTTGACCAAAAATTCAATAATACTTCTGCACCAGAAGATCTATGTTTCAATTTTTGGAAAAG

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

293

Start:

4695161  

End:

4695453

Strand:

+

>A01_SINE-tRNA_34

AAGCAAGTGGTAGTAGCCTATGGCAATTTGGTATGTATCCACATCAGTTTTGGATTTGATTCTTTCTTTTTTGGAACTAAATTATCACTACTTGGTCAGTATGGACTTGGACTTCGGTCCAAGTGATTTACATGGTGGGCGGGGCATAACAGATGATTGGTCCACTCCTTGGTATTAGTCGGAAGGTATTCCAAACTCGGGACAGACAGTATGATACGCTTTCGAACTAGTCCACTTTGTAGTACTAAGTGTGTTCTTTTCAGGACTGACCGGATCAGCCGATAGACTTTATC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

182

Start:

4716367  

End:

4716548

Strand:

-

>A01_SINE-tRNA_35

ATAATCCAGGTATCCGGACCTCTCACTTAGTCTGACTATCCTACCGCGTCCAATCGGAACTGGCGAGGAAGATTCTGGAGACCAAACGAAAACCATATTAAATCCGCTGTGGCAGGAATCAAATTCGTGATGGCGGACACCTCAGCTGAAGTTCCTTTATCACCAGAGACTATGAGGCCCGG

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

182

Start:

4723920  

End:

4724101

Strand:

-

>A01_SINE-tRNA_36

ATAATCCAGGTATCCGGACCTCTCACTTAGTCTGACTATCCTACCGCGTCCAATCGGAACTGGCGAGGAAGATTCTGGAGACCAAACGAAAACCATATTAAATCCGCTGTGGCAGGAATCAAATTCGTGATGGCGGACACCTCAGCTGAAGTTCCTTTATCACCAGAGACTATGAGGCCCGG

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

335

Start:

4962368  

End:

4962702

Strand:

+

>A01_SINE-tRNA_37

GTAGAAACACCTTAGATTAATGGTTAAGGTTTAAAAGTTTCTACATCCAAGTTTGGAGTTCGAATTCCATACAACGCAATTTCTTGCATATTATAGGATGCAAGGCTTATCGGATGTTTTAGAATATTGCGGGTAGAACTGTTCGTTGTGGTCGTCTGCTGAAAATAAATCATATTTATCGAGGATGTCGTACATGCAGAACCGTCCGTCAATTCAAGTGTTTCGGAGAAAGTATAGAATCATTATCCGTAGAGTTGTTCATCAGTATTACATATATTGAAAGTAGTTAATTATCATATTAATCAAATTAGAGATTATATGATGTAATTGTTACC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

282

Start:

4969669  

End:

4969950

Strand:

-

>A01_SINE-tRNA_38

ATATACCCTATCGGCCGATCTGGTCGTCTCTGAGAGGAACACATTTAGTGATAAAGAGTGGACTGGCTATCACACTGTCTAACCTGAGTTTGGAATACCTTCCGACTAATGCCAGATGGTGGACCATCATCTGTTACGATCCACCATGTAAACCATTTGGACCGAAATCCAAACCCAGACTAGTAAAGTAATGATTTAGTTTCCAGGAGGAATTGAATCCATTACTGATGTAGATACACACCATACCCCAAGAAATTGTCACTAGACTACCACTACTTGGTT

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

161

Start:

5119573  

End:

5119733

Strand:

+

>A01_SINE-tRNA_39

AACCAAGCGCTCGTAGCTTGGTGGTAAAGGAGGTACAATTGTACTGTCCGTCACCCAGGTTCGAGTCTTGGTCACAACGGATTTAACATCCCTTCCGTTGGGGCGCTGGACCCTTTTCGGGGGATAGTTGGGATTGTGACTGCCCAGATACTAGAGTTATC

Brassica rapa (Chiifu_V3.0)

ID:

A01_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

192

Start:

5134942  

End:

5135133

Strand:

+

>A01_SINE-tRNA_40

GTCCTAGGTTCAGTTTTTATATGAAATAAAGTTAATGTTATTTTGCCGGTCTCTGTTAAGATTTCGGTGCAGATAGTTTATACTATTATGATAACATGTGATTTAACTATCTCTAGTATTAGTCGGAAGCTATACTAAATTCGGATAATACAATATAATATGTAGTCAATTATGTAGTATATTAAGTGCATT