TBGR-Browse-Bju-LINE.LINE-L1

ID	Class	Order	Superfamily	Length	Start	End	Strand
A07_LINE-L1_61	Retrotransposons	LINE	LINE-L1	143	1665883	1666025	-
A07_LINE-L1_62	Retrotransposons	LINE	LINE-L1	84	3097993	3098076	+
A07_LINE-L1_63	Retrotransposons	LINE	LINE-L1	94	3928112	3928205	-
A07_LINE-L1_64	Retrotransposons	LINE	LINE-L1	148	8888318	8888465	+
A07_LINE-L1_65	Retrotransposons	LINE	LINE-L1	83	9207571	9207653	+
A07_LINE-L1_66	Retrotransposons	LINE	LINE-L1	112	10663771	10663882	+
A07_LINE-L1_67	Retrotransposons	LINE	LINE-L1	94	11542980	11543073	+
A07_LINE-L1_68	Retrotransposons	LINE	LINE-L1	90	12458818	12458907	-
A07_LINE-L1_69	Retrotransposons	LINE	LINE-L1	83	14467658	14467740	+
A07_LINE-L1_70	Retrotransposons	LINE	LINE-L1	96	14810469	14810564	-
A07_LINE-L1_71	Retrotransposons	LINE	LINE-L1	105	21506936	21507040	-
A07_LINE-L1_72	Retrotransposons	LINE	LINE-L1	94	28626051	28626144	+
A07_LINE-L1_73	Retrotransposons	LINE	LINE-L1	94	28629151	28629244	-
A07_LINE-L1_74	Retrotransposons	LINE	LINE-L1	88	34425635	34425722	+
A08_LINE-L1_75	Retrotransposons	LINE	LINE-L1	136	651438	651573	+
A08_LINE-L1_76	Retrotransposons	LINE	LINE-L1	140	4734330	4734469	+
A08_LINE-L1_77	Retrotransposons	LINE	LINE-L1	94	5678671	5678764	-
A08_LINE-L1_78	Retrotransposons	LINE	LINE-L1	92	7775133	7775224	+
A08_LINE-L1_79	Retrotransposons	LINE	LINE-L1	86	9391669	9391754	+
A08_LINE-L1_80	Retrotransposons	LINE	LINE-L1	83	11820786	11820868	-

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_61

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

143

Start:

1665883

End:

1666025

Strand:

-

>A07_LINE-L1_61

AAAAACAGACTGAACTGCCACTGTGAAATCATGAGCTATAATAGGCCAAGAGGTTTTAAAAAACTCACAAGGATACCCATCTGGTCCCGGAGATTTGTTAGAAGGCATTGCAAACAACACTTTTCGAATTTCCTCCTCTGTGA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_62

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

84

Start:

3097993

End:

3098076

Strand:

+

>A07_LINE-L1_62

CAGCGGGGATTACGTCAAGGCGATCCTTTATCCCCTTATTTATTTATCATGTGTACGGAGGCGTTAATTTCAAATATTAAAAAG

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_63

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

94

Start:

3928112

End:

3928205

Strand:

-

>A07_LINE-L1_63

GACCAAGAAGCTTTATAAAATTCACAGGAAAACTCGTCTGGCCCTGGAGATTTATTTGGTGACATGGAGAACAGCACTTCTCTAATCTCTTCTG

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_64

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

148

Start:

8888318

End:

8888465

Strand:

+

>A07_LINE-L1_64

ACCCACTTTTGAACCAGACAAATATCTGCCTCATTCCGAAAAAGAAGAAACCTCGGGAAATAGATGAGTTCAGACCTATCAGTCTATGTAATGTTAGCTACAAGATTATTTCTAAGCTACTATGTAAGAGACTTAAGAGGGTTATCCC

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_65

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

83

Start:

9207571

End:

9207653

Strand:

+

>A07_LINE-L1_65

TGCATACATGTGTAAATTTGTACATGTTTATATATGTATATGTGTACACGTGTACATGTTTATATGTGTTTATGTGCACATAT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_66

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

112

Start:

10663771

End:

10663882

Strand:

+

>A07_LINE-L1_66

TCACCGCAGACGAAATACAACAAGCTATGTTTGATATAGGACCGCATAGAGCTCCCGGCCCTGATGGTTTCACAGCCGTCTTTTATCATCAATTTTGGGATGAGTTAAAGCC

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_67

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

94

Start:

11542980

End:

11543073

Strand:

+

>A07_LINE-L1_67

GAGGAAATAAAGCAAGTCTTATTTTCTATGCCGACAAATAAGGCTCCTGGGCCAGATGGGTTTCCGGTGGAGTTTTACAAGGCAGCTTGGCCTG

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_68

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

90

Start:

12458818

End:

12458907

Strand:

-

>A07_LINE-L1_68

ATATGTGCACATAAACACATATAAACATGTACACATGTATATATGTACACAAATACACATAAACATGTACAAATTTACACATGTATGCAT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_69

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

83

Start:

14467658

End:

14467740

Strand:

+

>A07_LINE-L1_69

TAAATTTGTACATGTATATATGTGTACATATGTACATTTGTACAGGTGTACATGTTTATATGTGTTTTATGTGCATTGTATAT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_70

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

96

Start:

14810469

End:

14810564

Strand:

-

>A07_LINE-L1_70

AAGACTCTTTGAATAATTCTGTGGTGAATCCATCAGGTCCCGGAGCCTTACTCCCTGGCATTTTTAATAATACCCTCTTGATCTCTTCCTGAGTTA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_71

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

105

Start:

21506936

End:

21507040

Strand:

-

>A07_LINE-L1_71

TGTCCTGAAGAACCCTGCCGAGAAGCCATCAGGCCCCGGGGCCTTATCTGGGTGGATCAAGAACAGGGCTTCTTTGATTTCCTTAGCTGTGGGTATACCTGTCAA

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_72

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

94

Start:

28626051

End:

28626144

Strand:

+

>A07_LINE-L1_72

AGGAAGAAATTTGTAGAGTATTGTTCAAAATGCCAGGGAGTAAAGCTCCTGGTCCTGATGGATATACAGTAGAGTTCTTCAGGGAATCTTGGTC

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_73

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

94

Start:

28629151

End:

28629244

Strand:

-

>A07_LINE-L1_73

GACCAAGATTCCCTGAAGAACTCTACTGTATATCCATCAGGACCAGGAGCTTTACTCCCTGGCATTTTGAACAATACTCTACAAATTTCTTCCT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1_74

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

88

Start:

34425635

End:

34425722

Strand:

+

>A07_LINE-L1_74

TATGTATATATGTATGGGCGTATGTATAGCGGAATCTATATATGTATATGCGTATTTATATATATGTATATAGTATTAGCATAAGTAT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_75

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

136

Start:

651438

End:

651573

Strand:

+

>A08_LINE-L1_75

CCAATCAGTCTATGTAATGTGGGATATAAAATTATTTCGAAGGTTTTGTGTCAGCGGTTGAAAATTCATCTTCCCTTACTTATATCCGAAACTCAATCGGCATTCGTGGCAGGACGGTTAATCTCGGATAATATTC

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_76

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

140

Start:

4734330

End:

4734469

Strand:

+

>A08_LINE-L1_76

TTGAGGCCAATTAGTCTATGTAACGTGGGTTACAAGATTATTTCGAAGGTTTTATGCCAGCGATTGAAAATCTATCTTCCATTGCTCATATCTGAAACTCAATCGGCTTTTGTGGCAGGAAGGCTGATTTCTGATAATAT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_77

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

94

Start:

5678671

End:

5678764

Strand:

-

>A08_LINE-L1_77

GACCAAGCAACTTTGTAGAACTCCATTGGGTATCCATCAGGCCCAGGAGCTTTATTTGCAGGCATGGAGAACAAGACTTCCGTGATCTCTGCTG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_78

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

92

Start:

7775133

End:

7775224

Strand:

+

>A08_LINE-L1_78

TAAAATCATTTCTAAGGTCCTGGTGAATAGGTTGAAGAAGCATCTGTCTGGTCTTATTACAGAGAATCAAGCAGCCTTCATTCCGGGAAGAA

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_79

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

86

Start:

9391669

End:

9391754

Strand:

+

>A08_LINE-L1_79

AAAGCCTATGATCGAATAGAATGGAGTTTTGTACAACAAGTTCTACAGAGACTCGGCTTCAATGCAAAGTGGATCAACTGGTTAAT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_80

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

83

Start:

11820786

End:

11820868

Strand:

-

>A08_LINE-L1_80

GTCTTAAAAAACTCACAAGGGAACCCATCAGGCCCTGGGGACTTGTTATTTGGCATAGCAAAGAGAACTTTTCTAATTTCCTC