ID Class Order Superfamily Length Start End Strand View
A05_LINE-L1_41 RetrotransposonsLINELINE-L1179622740622918+
A05_LINE-L1_42 RetrotransposonsLINELINE-L113029757862975915+
A05_LINE-L1_43 RetrotransposonsLINELINE-L113994223359422473-
A05_LINE-L1_44 RetrotransposonsLINELINE-L11391014127710141415-
A05_LINE-L1_45 RetrotransposonsLINELINE-L11811084023110840411+
A05_LINE-L1_46 RetrotransposonsLINELINE-L12051090621210906416-
A05_LINE-L1_47 RetrotransposonsLINELINE-L11351388413713884271+
A05_LINE-L1_48 RetrotransposonsLINELINE-L11101770135217701461+
A05_LINE-L1_49 RetrotransposonsLINELINE-L1891901982119019909-
A05_LINE-L1_50 RetrotransposonsLINELINE-L11302372415223724281+
A06_LINE-L1_51 RetrotransposonsLINELINE-L1901019136510191454-
A06_LINE-L1_52 RetrotransposonsLINELINE-L11201158513411585253-
A06_LINE-L1_53 RetrotransposonsLINELINE-L11261173060111730726+
A06_LINE-L1_54 RetrotransposonsLINELINE-L1871403632314036409+
A06_LINE-L1_55 RetrotransposonsLINELINE-L1861524013415240219+
A06_LINE-L1_56 RetrotransposonsLINELINE-L11121524052915240640+
A06_LINE-L1_57 RetrotransposonsLINELINE-L11051566566115665765+
A06_LINE-L1_58 RetrotransposonsLINELINE-L1901688636816886457+
A06_LINE-L1_59 RetrotransposonsLINELINE-L1962002425920024354-
A06_LINE-L1_60 RetrotransposonsLINELINE-L11562699082126990976+

< 3 4 5 6 7 > Total 1186


Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_41

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

179

Start:

622740  

End:

622918

Strand:

+

>A05_LINE-L1_41

ATGCATGTGTGTCTATATAGATGTGTACAAGCAAGTGTGTGCATGTGTACAAGCAAATGTGTACATGTGTACAAGTGTACAACACCGAGTGCTTACACGTGTACAAGCGAGTACATGTACAATTTATGGCATGTACATAAGTAGTTTATTTTTGACATGTTTGTTGGTGTTTAAGGATG

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_42

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

130

Start:

2975786  

End:

2975915

Strand:

+

>A05_LINE-L1_42

CTGTGTTGCAGCAGTTTCTTTAGCTAGTCTGGCTTTGTTATTTTACTTGTTGAACGATTACTCCTTTGATGGAGCCTAAGATAAATTTATGAAAGTTGGTTTGAACAAAAAAAAAAAAAAAAAAAAAAAA

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_43

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

139

Start:

9422335  

End:

9422473

Strand:

-

>A05_LINE-L1_43

GAATATTATCGGAAATCAGCCTTCCTGCCACGAAAGCCGATTGGGTTTCAGATATAAGTAAGGAAAGATAGATTTTTAATCGCTGACACAAAACCTTGGAAATAATCTTATATCCTACATTACAAAGACTAATTGGCCG

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_44

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

139

Start:

10141277  

End:

10141415

Strand:

-

>A05_LINE-L1_44

GAATATTGTCGGAGATCAACCGCCCTGCCACAAAAGCCGATTGAGTCTCTGAGACGAGAGAGGGCAAATAGACTTTCAACCGTTGACACAAAACCTTCGATATAATTTTATATCCCACATTACATAAACTGATTGGTCG

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_45

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

181

Start:

10840231  

End:

10840411

Strand:

+

>A05_LINE-L1_45

TCTCATTCCGAAGACAGAGAGACCAAGTAGGATGACCGAACTTAGACCCATCAGTTTGTGCAATGTGGGTTATAAAATCATTTTAAAGCTATTATGCCAGAGGTTGAAAGGCTTATTACCAAATTTAATTTCGGAGACTCAATCGGCATTTATTTCCGGCAGGTTAATTTCGGATAACATT

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_46

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

205

Start:

10906212  

End:

10906416

Strand:

-

>A05_LINE-L1_46

CAAGACAAAGAGATAAGGGGAGAGGGAACATCCTTGCCTTAATCCTCTTGTACTTTGGAAATAACCTGCTAGCTCACCGTTTACTTGCACCGAGAATGAGGGAGTAGTTATACAAAGCTTTATCCATCTAATAAACGTAGCAGTAACCCCAATTGCTTCCAAACTCTGTAAGACAAATGACCACTGAACCGAGTCGAATGCTTTT

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_47

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

135

Start:

13884137  

End:

13884271

Strand:

+

>A05_LINE-L1_47

CCGATTAGTCTATGTAATGTTGGTTACAAGATTATCCCGAAAGTTTTGTGTCAAAGGATTGAAAATTTGCTACCCACGGCTTAATTTCGGAGAACAATCGGCTTTCGTGCCGGCAGGTTAATTCGGATAATATTC

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_48

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

110

Start:

17701352  

End:

17701461

Strand:

+

>A05_LINE-L1_48

GAGGAAGAAGTTACAGCTGAGGAAATCCGCAAAGTTTTATTTGCCATGCCTAATAATAAATCACCTGGTCCCGATGGTTATCCTGCAGAATTCTTTAAGACTACTTGGTC

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_49

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

89

Start:

19019821  

End:

19019909

Strand:

-

>A05_LINE-L1_49

ATTAGTTTGATCCAATGAAGATTAAACCCCATTTTCTATAGAAGAGCATGGATAAAGTCCCATTCCATCCTATCATACGCTTTGCTCAG

Brassica juncea (Tumida_V1.5)

ID:

A05_LINE-L1_50

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

130

Start:

23724152  

End:

23724281

Strand:

+

>A05_LINE-L1_50

ATCACATATTAACGAAAACCACTGGAAACGAACACAAAATTAAAAATATGTGTTAGATTTGTTAAGGACTCAGCAAAAAAATTTGGAGAAAATTCTGTGTAATCGTTAGAAATTACACAACGAAAGTTGA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_51

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

90

Start:

10191365  

End:

10191454

Strand:

-

>A06_LINE-L1_51

CCTTAAAAAATTCAGTAGTAAACCCATCTGGCCCCGACGACTTATTGCTAGGCATTCTGAATATTATTTCTTTGATCTCATCTTTTGTTA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_52

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

120

Start:

11585134  

End:

11585253

Strand:

-

>A06_LINE-L1_52

ATATACGAATGTACATATGTGAAGATGTACACATGTACGAATGTAAGTTTGCACATATGTACACATTTTTACATGTACATATCAGCACATGTTTACATGTACATATGTGCACATATATAA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_53

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

126

Start:

11730601  

End:

11730726

Strand:

+

>A06_LINE-L1_53

ATTATCGTCCTATTTCGTGCTGCAACGTGATCTACAAGGTGATATCAAAGATATTGGCTAGCCGCTTGAAAAAATTACTACCTTCTTTCATATCCCCAAACCAATCTGCGTTTGTTAAAGATAGGC

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_54

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

87

Start:

14036323  

End:

14036409

Strand:

+

>A06_LINE-L1_54

GCCAAAGATTGAAGAAGATTCTTTCACAACGGATATCTAAAACCCAATCAGCCTTTGTTGCTGAAAGACAAATCACAGATAATATCA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_55

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

86

Start:

15240134  

End:

15240219

Strand:

+

>A06_LINE-L1_55

CAGAGAAGGAGATAAAAGATGCGGTCTTTGCCATGAATCCCGAGAAAACACCAGGTCCTGATGGCATGACGGCAGCTTTCTACAGA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_56

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

112

Start:

15240529  

End:

15240640

Strand:

+

>A06_LINE-L1_56

CACACAAAAAACTTAAAAAAATAAGTTTATGGCTCTTAAGCTTGATATTGCAAAAGCTTTTGATAAGGTTGAGTGGTCCTTTATTTATTTGGTGATGGAGAAAATGGGTTTC

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_57

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

105

Start:

15665661  

End:

15665765

Strand:

+

>A06_LINE-L1_57

TGAAGATGTTCCAGGACTTCTTCTTTAAGAGTGTGTGTGCTCAGATCCCTGAAAAATGCTCCAATGCCTTGTATATTCCAAAATCAATTAAACACAATTAATATA

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_58

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

90

Start:

16886368  

End:

16886457

Strand:

+

>A06_LINE-L1_58

CCTGTTTCTGAGGCCGAGATAAGAAATGTGTTGTTCTCTATGCCATCTAGTAAAGCTCCAGGACCCGATGGTTTCCCGGCTGAGTTCTAC

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_59

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

96

Start:

20024259  

End:

20024354

Strand:

-

>A06_LINE-L1_59

AAAAACAGACTGAACTGCCACTGTGAAATCATGAGCTATAATAGGCCAAGAGGTTTTAAAAAACTCACAAGGATACCCATCTGGTCCCGGAGATTT

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1_60

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

156

Start:

26990821  

End:

26990976

Strand:

+

>A06_LINE-L1_60

CAGTTTCGACCCATTGTTAAATCAAACAAATATCTGTCTCATTCCTAAAAAGAAGAAACCTCGGGATATGACTGAGTTCAGACCTATTAGTCTCTGTAATGTTAGCTACAAGATTATATCTAAGCTATTATGCAAGAGACTCAAGAAGGTTATCCC