TBGR-Browse-Bju-LINE.LINE-L1

ID	Class	Order	Superfamily	Length	Start	End	Strand
A08_LINE-L1_81	Retrotransposons	LINE	LINE-L1	113	15300621	15300733	+
A08_LINE-L1_82	Retrotransposons	LINE	LINE-L1	103	16817652	16817754	+
A08_LINE-L1_83	Retrotransposons	LINE	LINE-L1	108	18386701	18386808	-
A08_LINE-L1_84	Retrotransposons	LINE	LINE-L1	108	18389719	18389826	-
A08_LINE-L1_85	Retrotransposons	LINE	LINE-L1	85	19549376	19549460	+
A08_LINE-L1_86	Retrotransposons	LINE	LINE-L1	179	21595571	21595749	+
A08_LINE-L1_87	Retrotransposons	LINE	LINE-L1	179	21598747	21598925	+
A08_LINE-L1_88	Retrotransposons	LINE	LINE-L1	179	21603635	21603813	+
A08_LINE-L1_89	Retrotransposons	LINE	LINE-L1	84	22485814	22485897	+
A08_LINE-L1_90	Retrotransposons	LINE	LINE-L1	156	24559760	24559915	+
A09_LINE-L1_91	Retrotransposons	LINE	LINE-L1	85	1437540	1437624	+
A09_LINE-L1_92	Retrotransposons	LINE	LINE-L1	109	5990010	5990118	-
A09_LINE-L1_93	Retrotransposons	LINE	LINE-L1	140	12761370	12761509	+
A09_LINE-L1_94	Retrotransposons	LINE	LINE-L1	84	13471062	13471145	-
A09_LINE-L1_95	Retrotransposons	LINE	LINE-L1	82	20133621	20133702	+
A09_LINE-L1_96	Retrotransposons	LINE	LINE-L1	96	21989058	21989153	+
A09_LINE-L1_97	Retrotransposons	LINE	LINE-L1	102	26947289	26947390	+
A09_LINE-L1_98	Retrotransposons	LINE	LINE-L1	96	28074326	28074421	-
A09_LINE-L1_99	Retrotransposons	LINE	LINE-L1	82	30568145	30568226	+
A09_LINE-L1_100	Retrotransposons	LINE	LINE-L1	108	40954853	40954960	-

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

113

Start:

15300621

End:

15300733

Strand:

+

>A08_LINE-L1_81

TACAGACCCATAGCCCTCTGTAATGTTTATTACAAAATCATATCAAAAATCCTAGCCTTGCGACTCAAGCCAGTCCTACAGGATGTTATCTCAGAAACACAGTCAGCGTTCAT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

103

Start:

16817652

End:

16817754

Strand:

+

>A08_LINE-L1_82

AGAAGAAATTCAAGAAAACATTATTTGCTATGCCAAATGATATAAATCTCTCGGGTCTGATGAATTCACAAGTGAGTTTTTTAAGGCTTCCTGGGAAATTTTC

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

108

Start:

18386701

End:

18386808

Strand:

-

>A08_LINE-L1_83

CACGAAAGCCGATTGAGTTTCTGAAATGAGCAATGGAAGATAGATTTTCAATCGCTGACACAAAACCTTCAAAATAATTTTATAGCCTACATTACATAGACTAATTGG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

108

Start:

18389719

End:

18389826

Strand:

-

>A08_LINE-L1_84

CACGAAAGCCGATTGAGTTTCTGAAATGAGCAATGGAAGATAGATTTTCAATCGCTGACACAAAACCTTCAAAATAATTTTATAGCCTACATTACATAGACTAATTGG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

85

Start:

19549376

End:

19549460

Strand:

+

>A08_LINE-L1_85

TTTTTTTGTTAAAATTAATAGTATGATGCATCGTTATACGTGTGCATATATAAATATATATATATATGTGTGTGTGTGTGTGTGT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

179

Start:

21595571

End:

21595749

Strand:

+

>A08_LINE-L1_86

ATGCATGTGTGTCTATATAGATGTGTACAAGCAAGTGTGTGCATGTGTACAAGCAAATGTGTACATGTGTACAAGTGTACAACACCGAGTGCTTACACGTGTACAAGCGAGTACATGTACAATTTATGGCATGTACATAAGTAGTTTATTTTTGACATGTTTGTTGGTGTTTAAGGATG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

179

Start:

21598747

End:

21598925

Strand:

+

>A08_LINE-L1_87

ATGCATGTGTGTCTATATAGATGTGTACAAGCAAGTGTGTGCATGTGTACAAGCAAATGTGTACATGTGTACAAGTGTACAACACCGAGTGCTTACACGTGTACAAGCGAGTACATGTACAATTTATGGCATGTACATAAGTAGTTTATTTTTGACATGTTTGTTGGTGTTTAAGGATG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

179

Start:

21603635

End:

21603813

Strand:

+

>A08_LINE-L1_88

ATGCATGTGTGTCTATATAGATGTGTACAAGCAAGTGTGTGCATGTGTACAAGCAAATGTGTACATGTGTACAAGTGTACAACACCGAGTGCTTACACGTGTACAAGCGAGTACATGTACAATTTATGGCATGTACATAAGTAGTTTATTTTTGACATGTTTGTTGGTGTTTAAGGATG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

84

Start:

22485814

End:

22485897

Strand:

+

>A08_LINE-L1_89

TTTCTAAATTAACCTGCAGATACGTGATGGCTCTACGGAGATCACCTTGTGATATGGAGCTCAAAGTTGAAAGAGCCTACACGG

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

156

Start:

24559760

End:

24559915

Strand:

+

>A08_LINE-L1_90

CAGTTTCGACCCATTGTTAAATCAAACAAATATCTGTCTCATTCCTAAAAAGAAGAAACCTCGGGATATGACTGAGTTCAGACCTATTAGTCTCTGTAATGTTAGCTACAAGATTATATCTAAGCTATTATGCAAGAGACTCAAGAAGGTTATCCC

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

85

Start:

1437540

End:

1437624

Strand:

+

>A09_LINE-L1_91

AGACAGGGAGATCCGCTGTCCCCATATCTGTTTGTCATAGCTATGAACTGCCTGTCCCATATGCTTAATGCAGCTGCAACTAACT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

109

Start:

5990010

End:

5990118

Strand:

-

>A09_LINE-L1_92

TACACATATCCACGTATCTGTTTACATGTGAATACGTAACATATAGAGCACATGTGCTATGTGTATATAACATATACTATAACGAAAGAGAAAGGACACATAAACAATG

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

140

Start:

12761370

End:

12761509

Strand:

+

>A09_LINE-L1_93

AAAGCTAAGATCGAGAGGAGAAAGAAGAAGGATGATCGCCAAAGAGAAGTACTATTTGATTCTATTTTTTTTCTTTTGATTTTTTTTCATTGTTATGTTCCTTTGATGATTTACCTAGTGGTTTCTTGTTTATACAGGTT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

84

Start:

13471062

End:

13471145

Strand:

-

>A09_LINE-L1_94

AAAGTCATGAGCAAGTACCGGCCAAGTCTTTTTGAAGAATTCACAAGGGAAACCATCCGGGCCAGGAGATTTATTTGAAGGCAT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

82

Start:

20133621

End:

20133702

Strand:

+

>A09_LINE-L1_95

GGAAGAGATTAAAAGCATTTTTTTCTCTATGCCGAAGAGCAAAGCCCCAGGGCCAGATGGGTTTCCCGTGCAATTCTTTTGG

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

96

Start:

21989058

End:

21989153

Strand:

+

>A09_LINE-L1_96

TAACTCAGGAAGAGATCAAGAGGGTATTATTCAAAATGCCAGGGAGTAAGGCTCCGGGGCCTGATGGATTCACCACAGAATTTTTCAAAGAGTCTT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

102

Start:

26947289

End:

26947390

Strand:

+

>A09_LINE-L1_97

TGAGCAAAGCTTTCGACAGAGTTGAATGGTCCTTTTCAGAATCACTCCTACTCAAGCTGGGTTTTGCGGAAAAATGGGTATCATGGATCAAAACGTGTATAT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

96

Start:

28074326

End:

28074421

Strand:

-

>A09_LINE-L1_98

GAGAATCCATCTGGACCAGGAGCTTTATGCGGCCCTATTTGAAATACTGCATCTCTTATTTCTTCCTCTGATATATCGCGAACTAGATCTTCATTC

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

82

Start:

30568145

End:

30568226

Strand:

+

>A09_LINE-L1_99

CAGCTGAAGAAATCACGGCAGTCATGTTTGGTATGCCAAAAAAGCAAAGCTCCTGGCCCCGACGGCTTTCCAATTGAGTTCT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1

Length:

108

Start:

40954853

End:

40954960

Strand:

-

>A09_LINE-L1_100

CACGAAAGCCGATTGAGTTTCTGAAATGAGCAATGGAAGATAGATTTTCAATCGCTGACACAAAACCTTCAAAATAATTTTATAGCCTACATTACATAGACTAATTGG