TBGR-Browse-Bju-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
B08_LINE-L1-Tx1_81	Retrotransposons	LINE	LINE-L1-Tx1	97	59991773	59991869	-
Contig1120_LINE-L1-Tx1_82	Retrotransposons	LINE	LINE-L1-Tx1	110	19656	19765	-
Contig134_971227_1142422_LINE-L1-Tx1_83	Retrotransposons	LINE	LINE-L1-Tx1	151	25552	25702	+
Contig1427_LINE-L1-Tx1_84	Retrotransposons	LINE	LINE-L1-Tx1	146	44114	44259	-
Contig1836_LINE-L1-Tx1_85	Retrotransposons	LINE	LINE-L1-Tx1	83	37505	37587	+
Contig236_319000_384004_LINE-L1-Tx1_86	Retrotransposons	LINE	LINE-L1-Tx1	117	30112	30228	-
Contig248_LINE-L1-Tx1_87	Retrotransposons	LINE	LINE-L1-Tx1	113	157296	157408	+
Contig3355_LINE-L1-Tx1_88	Retrotransposons	LINE	LINE-L1-Tx1	141	5591	5731	+
Contig4863_LINE-L1-Tx1_89	Retrotransposons	LINE	LINE-L1-Tx1	106	110248	110353	-
Contig4867_LINE-L1-Tx1_90	Retrotransposons	LINE	LINE-L1-Tx1	82	13567	13648	-
Contig5162_LINE-L1-Tx1_91	Retrotransposons	LINE	LINE-L1-Tx1	124	29582	29705	-
Contig60_LINE-L1-Tx1_92	Retrotransposons	LINE	LINE-L1-Tx1	118	20272	20389	+
Contig7720_LINE-L1-Tx1_93	Retrotransposons	LINE	LINE-L1-Tx1	102	3950	4051	-
Contig8871_LINE-L1-Tx1_94	Retrotransposons	LINE	LINE-L1-Tx1	82	2898	2979	+
Super_scaffold_110_LINE-L1-Tx1_95	Retrotransposons	LINE	LINE-L1-Tx1	137	82788	82924	+
Super_scaffold_11_1_3244223_1_976472_LINE-L1-Tx1_96	Retrotransposons	LINE	LINE-L1-Tx1	101	14284	14384	-
Super_scaffold_150_LINE-L1-Tx1_97	Retrotransposons	LINE	LINE-L1-Tx1	82	1376471	1376552	-
Super_scaffold_17_4873462_7097514_LINE-L1-Tx1_98	Retrotransposons	LINE	LINE-L1-Tx1	137	798792	798928	+
Super_scaffold_182_2_916190_LINE-L1-Tx1_99	Retrotransposons	LINE	LINE-L1-Tx1	88	562370	562457	-
Super_scaffold_57_401097_2158895_LINE-L1-Tx1_100	Retrotransposons	LINE	LINE-L1-Tx1	104	1204089	1204192	+

Brassica juncea (Tumida_V1.5)

ID:

B08_LINE-L1-Tx1_81

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

97

Start:

59991773

End:

59991869

Strand:

-

>B08_LINE-L1-Tx1_81

TTCCCTTCAGCAGCAGCTTTATCTAATAACAGAGATAAACAGTTCATAGCTATGACAAACAGGTAGGGAGAAAGGGGGTCACCCTGTCTAAGCCCTC

Brassica juncea (Tumida_V1.5)

ID:

Contig1120_LINE-L1-Tx1_82

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

19656

End:

19765

Strand:

-

>Contig1120_LINE-L1-Tx1_82

ATGTTATCAGAGATTAATCTTTCTGAAACAAAGGCAGACTGCGTCGGGGAAACTATGAGGGGCAAAAGAGGTTTCAGTCTCTGAGCTAAAATCTTAGCAATTATTTTGTA

Brassica juncea (Tumida_V1.5)

ID:

Contig134_971227_1142422_LINE-L1-Tx1_83

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

151

Start:

25552

End:

25702

Strand:

+

>Contig134_971227_1142422_LINE-L1-Tx1_83

TTTGTGCAATGTTAGCTATAAGATAATCTCCAAGGTCTTATGTCAGAGACTAAAAAAAGTTCTACCAGATAGAATCTCTGAAACCCAGTCAGCTTTCGTTACGGGAAGACAGATTTCGGATAATATCATGATAGCTCATGAGATGTTCCAT

Brassica juncea (Tumida_V1.5)

ID:

Contig1427_LINE-L1-Tx1_84

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

146

Start:

44114

End:

44259

Strand:

-

>Contig1427_LINE-L1-Tx1_84

AAGAATATTATCAGAGATCAACCTTCCAGCCACAAAAGCCGACTGAGTTTCGGAAATGAGCCAAGGAAGATAAATTTTTAGCCGCTGGCATAAAACTTTCGAAATAATTTTGTACCCTACATTACAAAGACTAATAGGCCTCAATT

Brassica juncea (Tumida_V1.5)

ID:

Contig1836_LINE-L1-Tx1_85

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

37505

End:

37587

Strand:

+

>Contig1836_LINE-L1-Tx1_85

TACCAAAGAGGAGGGCACACTTTTTTCAGATTTTCATAAACTCTCTCCACAATCTCTCCAAGTTTTCAAATCCTTGTTTTAAA

Brassica juncea (Tumida_V1.5)

ID:

Contig236_319000_384004_LINE-L1-Tx1_86

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

117

Start:

30112

End:

30228

Strand:

-

>Contig236_319000_384004_LINE-L1-Tx1_86

AAAACATCATCTCCTATAACGTCCCAAAAGGTTTGGTAAAAGTCCGCTGAGAAGCCATCGGGACCTGGTGCTTTATCCTTGTGTATAGAGAATACAGCTCTTTGCACTTCCATCTTA

Brassica juncea (Tumida_V1.5)

ID:

Contig248_LINE-L1-Tx1_87

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

113

Start:

157296

End:

157408

Strand:

+

>Contig248_LINE-L1-Tx1_87

CTTTGATTCCTAAGAAAGACAATGCAATTGAGATGAAGGACTACATGCCCATATCATGCTGCAATGTTCTTTATAAAATAATATCCAAGATTATTGCTAACAGGCTAAAAGAA

Brassica juncea (Tumida_V1.5)

ID:

Contig3355_LINE-L1-Tx1_88

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

141

Start:

5591

End:

5731

Strand:

+

>Contig3355_LINE-L1-Tx1_88

TAATGTGGCTTATAAAATAATCTCTAAAGTCCTGGTGAACCGACTGAAGACACATCTCAATGGTATGATCAGTGAAAATCAAGCGGCTTTTATTCCAGGACGCATGATAACAGATAATATTATCATTGCTCATGAGGTATT

Brassica juncea (Tumida_V1.5)

ID:

Contig4863_LINE-L1-Tx1_89

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

106

Start:

110248

End:

110353

Strand:

-

>Contig4863_LINE-L1-Tx1_89

AGCAATTACCATCATTCGTTTTGCAGAAAAAACATAGTATCATCTGCAAAAAGAAGATGGTTGATGAAAATACTTTGTCTAGCCACTTGGAGACCCTTGAGATTAC

Brassica juncea (Tumida_V1.5)

ID:

Contig4867_LINE-L1-Tx1_90

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

13567

End:

13648

Strand:

-

>Contig4867_LINE-L1-Tx1_90

ATCTGCTCCAATCACTGGCCAAGCTTCCTTAAAGAATTCCGAAGTGAACCCATCTGGTCCTGGAGATTTACTTGAGGGCATC

Brassica juncea (Tumida_V1.5)

ID:

Contig5162_LINE-L1-Tx1_91

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

124

Start:

29582

End:

29705

Strand:

-

>Contig5162_LINE-L1-Tx1_91

ACAAATTGCTTCTCCTACGATATCCCAACATTCTTGATAAAAACGAGCCGTTAATCCATCCGGTCCTGGTGCTTTGTCAGCTCCTATATGACAAATCGCTGCATGGATTTCTTCATTAGAAATA

Brassica juncea (Tumida_V1.5)

ID:

Contig60_LINE-L1-Tx1_92

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

118

Start:

20272

End:

20389

Strand:

+

>Contig60_LINE-L1-Tx1_92

TCCGGATAAGCTTGAGATACAACGGGCAGTTTTTTCTATTCACCCAGATAAAGCTCCCGGTCCAGATGGTTTCTCAGCAAGTTTCTACAAAAGCTTTTGGGATATAATAGGAGATGAT

Brassica juncea (Tumida_V1.5)

ID:

Contig7720_LINE-L1-Tx1_93

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

102

Start:

3950

End:

4051

Strand:

-

>Contig7720_LINE-L1-Tx1_93

AGCATCTGCTACTTCCGTCTCAGTTTTGTTGAGCTCTTGATTTTCTTCTTTCTTCTCTGGGCAAACAGACTTGAAGTGACCTTTTTTGTTGCAGTTGAAGCA

Brassica juncea (Tumida_V1.5)

ID:

Contig8871_LINE-L1-Tx1_94

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

2898

End:

2979

Strand:

+

>Contig8871_LINE-L1-Tx1_94

TGGATGAGATTATGAGAACAATGTTTAAACTGAACCCAAACAAAAGCCCAGGACCTGATGGTCTCACTTCTCGGTTCTATAG

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_110_LINE-L1-Tx1_95

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

137

Start:

82788

End:

82924

Strand:

+

>Super_scaffold_110_LINE-L1-Tx1_95

CGGCCAATCAGCTTGTGCAATGTTAGCTACAAAATAATCTCTAAGATCTTATGCCAGAGATTAAAGAAAGTTCTACCAGATAGAATCTCAGAAACCCAGTCAGCCTTTATTCCTGGAAGACAGATTTCTGATAATAT

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_11_1_3244223_1_976472_LINE-L1-Tx1_96

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

14284

End:

14384

Strand:

-

>Super_scaffold_11_1_3244223_1_976472_LINE-L1-Tx1_96

GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAGAAGGATTCAATTTCCTTAATTCAGAAAGACTGATTTACAACCATATTTAAAGAAAAACA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_150_LINE-L1-Tx1_97

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

1376471

End:

1376552

Strand:

-

>Super_scaffold_150_LINE-L1-Tx1_97

AAGTCTTTACCAATTATCGACCAGGAGGCTTTGAAAAATTCTGCTGTGAATCCATCTGGCCCTGGGGACTTATTATTTGGCA

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_17_4873462_7097514_LINE-L1-Tx1_98

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

137

Start:

798792

End:

798928

Strand:

+

>Super_scaffold_17_4873462_7097514_LINE-L1-Tx1_98

AGGTCAATTAGCTTGTGCAATGTTAGCTACAAGATAATCTCTAAGGTCTTATGCAAGAGATTAAAGAAAGTTCTACCGATAGAATTTCAGAAACCCAGTAAGCCTTTGTTGCTGGAAGGCAGATATCTGATAATATC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_182_2_916190_LINE-L1-Tx1_99

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

562370

End:

562457

Strand:

-

>Super_scaffold_182_2_916190_LINE-L1-Tx1_99

CCATCTCTATAGATGTTATTTGAAGTGAATTAAAAAAAAATGCCTTGCCGTATTAAAAATCCTACGACTCTTGCTGTAACATGTTTTC

Brassica juncea (Tumida_V1.5)

ID:

Super_scaffold_57_401097_2158895_LINE-L1-Tx1_100

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

104

Start:

1204089

End:

1204192

Strand:

+

>Super_scaffold_57_401097_2158895_LINE-L1-Tx1_100

CCCATCAGTTTGTTTAATGTCGGATATAAAATTATTTCTAAGGTTTTATGTCAAAGATTGAAGTTGTGTCTTCCGTCACTGATTTCAGAAACTCAGTCGGCTTT