TBGR-Browse-Bju-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
A06_LINE-L1-Tx1_21	Retrotransposons	LINE	LINE-L1-Tx1	84	12411919	12412002	+
A06_LINE-L1-Tx1_22	Retrotransposons	LINE	LINE-L1-Tx1	88	24923817	24923904	-
A06_LINE-L1-Tx1_23	Retrotransposons	LINE	LINE-L1-Tx1	90	28072528	28072617	+
A07_LINE-L1-Tx1_24	Retrotransposons	LINE	LINE-L1-Tx1	124	14810261	14810384	-
A08_LINE-L1-Tx1_25	Retrotransposons	LINE	LINE-L1-Tx1	146	23322173	23322318	-
A08_LINE-L1-Tx1_26	Retrotransposons	LINE	LINE-L1-Tx1	146	23338649	23338794	-
A09_LINE-L1-Tx1_27	Retrotransposons	LINE	LINE-L1-Tx1	134	6940446	6940579	-
A09_LINE-L1-Tx1_28	Retrotransposons	LINE	LINE-L1-Tx1	82	9857301	9857382	+
A09_LINE-L1-Tx1_29	Retrotransposons	LINE	LINE-L1-Tx1	101	15040936	15041036	-
A09_LINE-L1-Tx1_30	Retrotransposons	LINE	LINE-L1-Tx1	110	18798965	18799074	-
A09_LINE-L1-Tx1_31	Retrotransposons	LINE	LINE-L1-Tx1	110	18806982	18807091	-
A09_LINE-L1-Tx1_32	Retrotransposons	LINE	LINE-L1-Tx1	112	19621787	19621898	-
A09_LINE-L1-Tx1_33	Retrotransposons	LINE	LINE-L1-Tx1	124	21989238	21989361	+
A09_LINE-L1-Tx1_34	Retrotransposons	LINE	LINE-L1-Tx1	82	49884995	49885076	-
A09_LINE-L1-Tx1_35	Retrotransposons	LINE	LINE-L1-Tx1	87	55536717	55536803	+
A09_LINE-L1-Tx1_36	Retrotransposons	LINE	LINE-L1-Tx1	87	55544982	55545068	+
A10_LINE-L1-Tx1_37	Retrotransposons	LINE	LINE-L1-Tx1	86	18795791	18795876	-
B01_LINE-L1-Tx1_38	Retrotransposons	LINE	LINE-L1-Tx1	126	13805175	13805300	+
B01_LINE-L1-Tx1_39	Retrotransposons	LINE	LINE-L1-Tx1	93	34446706	34446798	-
B01_LINE-L1-Tx1_40	Retrotransposons	LINE	LINE-L1-Tx1	111	36302982	36303092	+

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1-Tx1_21

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

12411919

End:

12412002

Strand:

+

>A06_LINE-L1-Tx1_21

CGTGGATTACGACAAGGAGATCCTTTATCACCTTATCTTTTTATATTGTGCACTGAGGCTTTGATTACAAATATTAAAAAGGCG

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1-Tx1_22

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

24923817

End:

24923904

Strand:

-

>A06_LINE-L1-Tx1_22

CATTCACCATTATGATCTCCAGAAAAAACGACAAAGGGCCAGTTTTTAATTTTATTTAAATCTCTCTTTTTTTGCAAAAGTTCAAAAC

Brassica juncea (Tumida_V1.5)

ID:

A06_LINE-L1-Tx1_23

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

90

Start:

28072528

End:

28072617

Strand:

+

>A06_LINE-L1-Tx1_23

AGCTTTCTTTCTTTTCTTGGCAGTCAAGAAACAAGATTGTGTATTAATTGCAGGAAGGACATTCTAAGGCGATACAAGATGATAAATCTT

Brassica juncea (Tumida_V1.5)

ID:

A07_LINE-L1-Tx1_24

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

124

Start:

14810261

End:

14810384

Strand:

-

>A07_LINE-L1-Tx1_24

AGTATACTCTTTAACCTATTTGCCAAAATCTTCGAAATCAGCTTGTATAAGACGTTGCAACAGGATATAGGCCTGTAATCCTTCATCCCTTTTGCTTCTGTCTTCTTTGGTACCAGTGTTAAGA

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1-Tx1_25

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

146

Start:

23322173

End:

23322318

Strand:

-

>A08_LINE-L1-Tx1_25

AAGAATATTATCAGAGATCAACCTTCCAGCCACAAAAGCCGACTGAGTTTCGGAAATGAGCCAAGGAAGATAAATTTTTAGCCGCTGGCATAAAACTTTCGAAATAATTTTGTACCCTACATTACAAAGACTAATAGGCCTCAATT

Brassica juncea (Tumida_V1.5)

ID:

A08_LINE-L1-Tx1_26

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

146

Start:

23338649

End:

23338794

Strand:

-

>A08_LINE-L1-Tx1_26

AAGAATATTATCAGAGATCAACCTTCCAGCCACAAAAGCCGACTGAGTTTCGGAAATGAGCCAAGGAAGATAAATTTTTAGCCGCTGGCATAAAACTTTCGAAATAATTTTGTACCCTACATTACAAAGACTAATAGGCCTCAATT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_27

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

134

Start:

6940446

End:

6940579

Strand:

-

>A09_LINE-L1-Tx1_27

ATGTTGTCTGAGATCTGTCTCCCAGCAACAAAGGCTGACTGGGTTTCCGATATCAGGCCTGGTAACACTTTCTTTAATCTTTTACATAAGACCTTAGAGATTATCTTGTAGCTGACGTTACACAAACTAATGGG

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_28

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

9857301

End:

9857382

Strand:

+

>A09_LINE-L1-Tx1_28

CTATCCATCCCGATAAGGCCCCAGGCCCTGATGGTTTCTCAGCTTCTTTCTATCAATCCTTTTGGGATGTGATCGGAGAAGA

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_29

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

15040936

End:

15041036

Strand:

-

>A09_LINE-L1-Tx1_29

GCCTTCAATCTGTTTGCAATGAGTTTCGAAATCACTTTGTAAAGGACGTTGCAGCAAGAGATTGGTCTGTAGTCCTTCATTTCGGTCGCAGTATCTTTCTT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_30

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

18798965

End:

18799074

Strand:

-

>A09_LINE-L1-Tx1_30

ATATTATCAGAGATTAACCTTCCTGGCACAAAAGCTGACTGAGTTTCTGAAATAAGAGAAGGTAGACATATCTTCAATCTCTGACACAGAACCTTCGAAATAATTTTATA

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_31

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

18806982

End:

18807091

Strand:

-

>A09_LINE-L1-Tx1_31

ATATTATCAGAGATTAACCTTCCTGACACAAAAGCTGACTGAGTTTCTGAAATAAGAGAAGGTAGACATATCTTCAATCTCTGACACAGAACCTTCGAAATAATTTTATA

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_32

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

112

Start:

19621787

End:

19621898

Strand:

-

>A09_LINE-L1-Tx1_32

AATCTGTTGGCGATGACCTTTGAAATCACTTTGTAGAGAACATTGCAGCAAGAGATTGGCCTATAGTCTCTCATCTCTGTTGCATTGCCCTTCTTTGCCACCAACGCCAGAA

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_33

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

124

Start:

21989238

End:

21989361

Strand:

+

>A09_LINE-L1-Tx1_33

TCTTAACACTGGTCCCAAAGAAGACAGAAGCAAAAGGGATGAAGGATTACAGGCCTATATCCTGTTGCAACGTCTTATACAAGCTGATTTCGAAGATTTTGGCAAATAGGTTAAAGAGTATACT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_34

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

49884995

End:

49885076

Strand:

-

>A09_LINE-L1-Tx1_34

TTAACAGATGCGTTAGTCCTTCAGTACACAACACAAAGAGGAATGGGGAGAGAGGATCTCCTTGACGGAGTCCCCGTTGCGG

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_35

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

55536717

End:

55536803

Strand:

+

>A09_LINE-L1-Tx1_35

CCATTCATCCTGACAAGGCCCCGGGACCTGACGGGTTCTCAGCCGGATTCTATCAATCCTTTTGGGATGTAATCGGAGAGGATATTT

Brassica juncea (Tumida_V1.5)

ID:

A09_LINE-L1-Tx1_36

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

87

Start:

55544982

End:

55545068

Strand:

+

>A09_LINE-L1-Tx1_36

CCATTCATCCTGACAAGGCCCCGGGACCTGACGGGTTCTCAGCCGGATTCTATCAATCCTTTTGGGATGTAATCGGAGAGGATATTT

Brassica juncea (Tumida_V1.5)

ID:

A10_LINE-L1-Tx1_37

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

86

Start:

18795791

End:

18795876

Strand:

-

>A10_LINE-L1-Tx1_37

GAGAAGAAGAAGAGGAGGTGGAGAGAGAGAGAGAGAGAAAGTATTTTAAATATTGAATTTTTTTTTTCCTAAAATTATTTTAAACT

Brassica juncea (Tumida_V1.5)

ID:

B01_LINE-L1-Tx1_38

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

126

Start:

13805175

End:

13805300

Strand:

+

>B01_LINE-L1-Tx1_38

TATTTCTAATGAAGAAATCCATGCAGCGATTTGTCATATAGGAGCTGACAAAGCACCAGGACCGGATGGATTAACGGCTCGTTTTTATCAAGAATGTTGGGATATCGTAGGAGAAGCAATTTGTGT

Brassica juncea (Tumida_V1.5)

ID:

B01_LINE-L1-Tx1_39

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

93

Start:

34446706

End:

34446798

Strand:

-

>B01_LINE-L1-Tx1_39

AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGTGTGAACAAGGTCTTTTTGTATTAAAAATTTCTGACAAACTTTTTTCATCAGAAATTTTAA

Brassica juncea (Tumida_V1.5)

ID:

B01_LINE-L1-Tx1_40

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

111

Start:

36302982

End:

36303092

Strand:

+

>B01_LINE-L1-Tx1_40

TACAAGATCATTTCAAAAGTATTATGTCAGAGATTGAAGGCTTGTCTTCCTTCACTTATTTCAGAAACTCAGTCAGCCTTCGTGCCCGGAAGACTAATTTCTGATAATATA