TBGR-Browse-Bju-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
B01_LINE-L1-Tx1_41	Retrotransposons	LINE	LINE-L1-Tx1	84	39239848	39239931	-
B02_LINE-L1-Tx1_42	Retrotransposons	LINE	LINE-L1-Tx1	91	2186673	2186763	-
B02_LINE-L1-Tx1_43	Retrotransposons	LINE	LINE-L1-Tx1	127	18759066	18759192	-
B02_LINE-L1-Tx1_44	Retrotransposons	LINE	LINE-L1-Tx1	103	26595511	26595613	+
B02_LINE-L1-Tx1_45	Retrotransposons	LINE	LINE-L1-Tx1	85	30216282	30216366	-
B03_LINE-L1-Tx1_46	Retrotransposons	LINE	LINE-L1-Tx1	134	15496191	15496324	-
B03_LINE-L1-Tx1_47	Retrotransposons	LINE	LINE-L1-Tx1	83	22793132	22793214	-
B03_LINE-L1-Tx1_48	Retrotransposons	LINE	LINE-L1-Tx1	82	26546808	26546889	-
B03_LINE-L1-Tx1_49	Retrotransposons	LINE	LINE-L1-Tx1	119	28480058	28480176	+
B03_LINE-L1-Tx1_50	Retrotransposons	LINE	LINE-L1-Tx1	126	29590118	29590243	+
B03_LINE-L1-Tx1_51	Retrotransposons	LINE	LINE-L1-Tx1	94	32319041	32319134	+
B03_LINE-L1-Tx1_52	Retrotransposons	LINE	LINE-L1-Tx1	101	47048025	47048125	+
B03_LINE-L1-Tx1_53	Retrotransposons	LINE	LINE-L1-Tx1	110	56549642	56549751	+
B04_LINE-L1-Tx1_54	Retrotransposons	LINE	LINE-L1-Tx1	117	6732102	6732218	+
B04_LINE-L1-Tx1_55	Retrotransposons	LINE	LINE-L1-Tx1	101	9866236	9866336	-
B04_LINE-L1-Tx1_56	Retrotransposons	LINE	LINE-L1-Tx1	83	25135787	25135869	-
B04_LINE-L1-Tx1_57	Retrotransposons	LINE	LINE-L1-Tx1	85	27540284	27540368	-
B04_LINE-L1-Tx1_58	Retrotransposons	LINE	LINE-L1-Tx1	136	33937458	33937593	-
B05_LINE-L1-Tx1_59	Retrotransposons	LINE	LINE-L1-Tx1	128	24685557	24685684	+
B05_LINE-L1-Tx1_60	Retrotransposons	LINE	LINE-L1-Tx1	128	24699226	24699353	+

Brassica juncea (Tumida_V1.5)

ID:

B01_LINE-L1-Tx1_41

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

39239848

End:

39239931

Strand:

-

>B01_LINE-L1-Tx1_41

CTTTCATGCATAGACCTGATAATATTTGTCCACAAGATGAATAAATAAGGAGATAGGGGGTCCCCTTGTCTTATTCCCCTCTTA

Brassica juncea (Tumida_V1.5)

ID:

B02_LINE-L1-Tx1_42

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

91

Start:

2186673

End:

2186763

Strand:

-

>B02_LINE-L1-Tx1_42

ATGAATTTAGGCATTATTCCTTTAAGCCTATTTCCTAGAATCTTTGATATCACCTTGTAGATCACATTACAGCATGAAATTGGCCTATAAT

Brassica juncea (Tumida_V1.5)

ID:

B02_LINE-L1-Tx1_43

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

127

Start:

18759066

End:

18759192

Strand:

-

>B02_LINE-L1-Tx1_43

CGCCAGCAAGACGTTCTCCAAAATAAGTCTGTTCTCCACAAAACCAGTTTGATTAGGATGGATGATAGAAGGCAGAACCTTCTTCAAACGAACCGAAATGACTTTGGTGACCAGCTTGTATATGGTA

Brassica juncea (Tumida_V1.5)

ID:

B02_LINE-L1-Tx1_44

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

103

Start:

26595511

End:

26595613

Strand:

+

>B02_LINE-L1-Tx1_44

AACCTGGATAAGGCCCCTGGCCCGGATGGCTTTTCCGTTAGTTTTTACAAAGCCTTTTGGGACATTACTGGAGAGGATATATATGGTGATATCAGAATGTTTT

Brassica juncea (Tumida_V1.5)

ID:

B02_LINE-L1-Tx1_45

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

85

Start:

30216282

End:

30216366

Strand:

-

>B02_LINE-L1-Tx1_45

GCCAAGAATTCTGTACCTAAAATATGCCAAGTAGCTTTATAAAATCCCGAGGAAAGGCCATCAGGTCCTGGAGCCTTATTAGATT

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_46

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

134

Start:

15496191

End:

15496324

Strand:

-

>B03_LINE-L1-Tx1_46

TTATCTGTTATCTGTCTACCAGGTATAAAGGCTGCCTGGTTTTCTGAGACTATTGACGGGAGTATTTCTTTTAATCTCCAAATTAGAATTTTCGAAATAACTTTGTAAATAACATTACATAAAGCTATTGGACG

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_47

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

22793132

End:

22793214

Strand:

-

>B03_LINE-L1-Tx1_47

CCTTAAAGCTTGGCTAAGCATTTATCAAAGTAATAGTTTTTTTTAGCTGATCTGCTATTCTTAACGCAGTGCATTCCCCACCC

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_48

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

26546808

End:

26546889

Strand:

-

>B03_LINE-L1-Tx1_48

CATCCTGAAGAAGTATGTAGTGTTTTGATCTCCCTCTTTTAGCCAGTTTACCCTTGATTTTTTTCTGAAATAAGCCTCCTCA

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_49

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

119

Start:

28480058

End:

28480176

Strand:

+

>B03_LINE-L1-Tx1_49

CATTAATACCAAAGAAGGAGAAAGCAGAAGAAATGAAAGACTATAGACCAATATCGTGTTGCAACGTCTTGTACAAAGCAATATCTAAGATTCTGGCAAACAGATTGAAAGAAATTTTG

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_50

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

126

Start:

29590118

End:

29590243

Strand:

+

>B03_LINE-L1-Tx1_50

AAGGTTCTCTCCAAAATATTAGCAAACAGGCTGAAAAAGGTGCTTCCGAAGTTTATATCCCCAAACCAATCAGCTTTTGTCAAGGATCGTCTTCTCATGGAAAACGTTTTACTTGCTTCCGAGCTG

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_51

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

94

Start:

32319041

End:

32319134

Strand:

+

>B03_LINE-L1-Tx1_51

AGCTATTTTAAAGCTGAATCCGAATAAAGCTCCGGGTCCAAACGGTCTTAACTCAGGATAATTCAAATCTGCTTGGTCAATTGTTGGAGAAGAT

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_52

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

47048025

End:

47048125

Strand:

+

>B03_LINE-L1-Tx1_52

TGCCTGAAATAAACAACTCTTCTTATTCTTCATTTAACGTTGCACATAGTCAAAAAAAGTTTGGTGCCAAATAACTACTGTCTCCTTATGAAAAGGAGTGA

Brassica juncea (Tumida_V1.5)

ID:

B03_LINE-L1-Tx1_53

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

110

Start:

56549642

End:

56549751

Strand:

+

>B03_LINE-L1-Tx1_53

TACAAGATTATTTCTAAGGTATTATGCCAAAGATTAAAGGTCTGTTTTCCCTCACTTATTTCGGAAACACAATCGGCCTTTGTGCCAAGAAGATTAATCTCTAATAATAT

Brassica juncea (Tumida_V1.5)

ID:

B04_LINE-L1-Tx1_54

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

117

Start:

6732102

End:

6732218

Strand:

+

>B04_LINE-L1-Tx1_54

TAAGATGGAAGTGCAAAGAGCTGTATTCTCTATACACAAGGATAAAGCACCAGGTCCCGATGGCTTCTCAGCGGACTTTTACCAAACCTTTTGGGACGTTATAGGAGATGATGTTTT

Brassica juncea (Tumida_V1.5)

ID:

B04_LINE-L1-Tx1_55

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

9866236

End:

9866336

Strand:

-

>B04_LINE-L1-Tx1_55

GCCTTCAATCTGTTTGCAATGAGTTTCGAAATCACTTTGTAAAGGACGTTGCAGCAAGAGATTGGTCTGTAGTCCTTCATTTCGGTCGCAGTATCTTTCTT

Brassica juncea (Tumida_V1.5)

ID:

B04_LINE-L1-Tx1_56

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

83

Start:

25135787

End:

25135869

Strand:

-

>B04_LINE-L1-Tx1_56

AATTCCTTTCCTAAGATTTACCAGGAAGCTCTAAAGAATTCCACCGGGAACCCATCTGGACCTGGAGTCTTATTATTCTTCAT

Brassica juncea (Tumida_V1.5)

ID:

B04_LINE-L1-Tx1_57

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

85

Start:

27540284

End:

27540368

Strand:

-

>B04_LINE-L1-Tx1_57

TATAAAACTATGCATTGAAACCATCTGGCCCAGGAGATTTATTTGTTGGCATGGAGAAGAGAACATCTTTTATCTCTTCTTTAGT

Brassica juncea (Tumida_V1.5)

ID:

B04_LINE-L1-Tx1_58

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

136

Start:

33937458

End:

33937593

Strand:

-

>B04_LINE-L1-Tx1_58

ATATTATCAGATATTTGTCTTCCAGCAACAAAAGCTGACTGTGTCTCTGAGATCCTATCTGGTAACACTTTCTTTAACCTCTCACATAAGACCTTAGAGATTATCTTATAGCTAACATTGCACAAACTAATAGGCC

Brassica juncea (Tumida_V1.5)

ID:

B05_LINE-L1-Tx1_59

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

128

Start:

24685557

End:

24685684

Strand:

+

>B05_LINE-L1-Tx1_59

ATTTTGTGCAATGTCAGCTACAAAATAATCTCTAAGGTCTTATGCAAGAGATTAAATAAAGTTTTACCGGACCGAAACTCAGAAATCTAGTCAGCCTTTATTGCTGGATGACACATCTCCGATAATAT

Brassica juncea (Tumida_V1.5)

ID:

B05_LINE-L1-Tx1_60

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

128

Start:

24699226

End:

24699353

Strand:

+

>B05_LINE-L1-Tx1_60

ATTTTGTGCAATGTCAGCTACAAAATAATCTCTAAGGTCTTATGCAAGAGATTAAATAAAGTTTTACCGGACCGAAACTCAGAAATCTAGTCAGCCTTTATTGCTGGATGACACATCTCCGATAATAT