ID Class Order Superfamily Length Start End Strand View
Chr2_LTR-Cassandra_61 RetrotransposonsLTRLTR-Cassandra9514316491431743+
Chr2_LTR-Cassandra_62 RetrotransposonsLTRLTR-Cassandra31116010691601379-
Chr2_LTR-Cassandra_63 RetrotransposonsLTRLTR-Cassandra34620106842011029+
Chr2_LTR-Cassandra_64 RetrotransposonsLTRLTR-Cassandra31625165622516877+
Chr2_LTR-Cassandra_65 RetrotransposonsLTRLTR-Cassandra31926078132608131+
Chr2_LTR-Cassandra_66 RetrotransposonsLTRLTR-Cassandra35526362012636555-
Chr2_LTR-Cassandra_67 RetrotransposonsLTRLTR-Cassandra11226365562636667-
Chr2_LTR-Cassandra_68 RetrotransposonsLTRLTR-Cassandra35526366682637022-
Chr2_LTR-Cassandra_69 RetrotransposonsLTRLTR-Cassandra35526646012664955-
Chr2_LTR-Cassandra_70 RetrotransposonsLTRLTR-Cassandra11226649562665067-
Chr2_LTR-Cassandra_71 RetrotransposonsLTRLTR-Cassandra35526650682665422-
Chr2_LTR-Cassandra_72 RetrotransposonsLTRLTR-Cassandra35632167603217115+
Chr2_LTR-Cassandra_73 RetrotransposonsLTRLTR-Cassandra30051608865161185-
Chr2_LTR-Cassandra_74 RetrotransposonsLTRLTR-Cassandra11251611865161297-
Chr2_LTR-Cassandra_75 RetrotransposonsLTRLTR-Cassandra33851775555177892+
Chr2_LTR-Cassandra_76 RetrotransposonsLTRLTR-Cassandra35653227775323132-
Chr2_LTR-Cassandra_77 RetrotransposonsLTRLTR-Cassandra8858037845803871+
Chr2_LTR-Cassandra_78 RetrotransposonsLTRLTR-Cassandra12880829818083108+
Chr2_LTR-Cassandra_79 RetrotransposonsLTRLTR-Cassandra29782489548249250-
Chr2_LTR-Cassandra_80 RetrotransposonsLTRLTR-Cassandra9385605358560627-

< 4 5 6 7 8 > Total 9


Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

95

Start:

1431649  

End:

1431743

Strand:

+

>Chr2_LTR-Cassandra_61

TGTAATACCAGGGTTTCAAAAAGATGGTGATGAATGCAAAAAGGTTTTAAATAATTAATTTGGCCACCTATGTCACCAAAGTGCACTTATCATTT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

311

Start:

1601069  

End:

1601379

Strand:

-

>Chr2_LTR-Cassandra_62

TGTAATGCTCTGACCGTTTCTACTAATGAGCATTAATGTCCTTTCTCGGGTCTATGGGCTCTACCACTGTCCAACTGTCGGTTCACTATGTACGAGAGGCTTTAAGATTTTTTACCACCCTTACAAATCACCACATGATATTTTCCTGTGCTTTGTCCTCATTCACACGGTTCGGACAATCACTTTCCAGAAAGTCACTCATCCTGAATTTGCTGCATCCCAAACATGCTTAGCTTTGAAGTTCTCTTCAACGTTTGATCGAAAAGATAAATGCACTTTGGTGACATAGATTGCCAAATCAATTATTTTAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

346

Start:

2010684  

End:

2011029

Strand:

+

>Chr2_LTR-Cassandra_63

TGTACTACTTCAGTTTAAAGAATATAGTAGTGTATGCAGAAAGGTTTAAAATAATTGATGTGGCCATTTATGTAATAAAATTGCACTTATATTGGTCAATTATATGAGAGAACTCCACAGTGAGCGTGTTTGGGCTGGAGTAATTTCATGATATATGACCTTCCCAAAATTGATTGTTGGAACCATGCGAGTGAGCACAAATCATGAAGAAATATCATATAGTGATTTATAGGATCGGTAAACAAGTCTTTAAAGCCTCTCAGACATAGAAAACCGATTATCGAAAAAAAATAGGCCAACGGGCCCTAAAAGAGGATATAGTACTTGTAGAAACGGTGGCGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

316

Start:

2516562  

End:

2516877

Strand:

+

>Chr2_LTR-Cassandra_64

TGTAACACCCCGATTTCAGAAATATGGTGGTTCATGCAGAGAGGTTTAAAAGAATTGATTTGGCTACCTAAGAGAACTCTACAGTTAAGCGTGCTTGGACTGGAGTAGTTTCAGGATGGGTGACCTTCCGGGAAGTGATTGTCGGAACCATGCGAGTGGGAACAAAGCATGGGGAAAGATCATGTGGTGAATTGTAGGATCGGTAACAAGTCTTTAAAGACTCTCACACGTGGCGCACCGACCGTCGGACAGGGGTGGGCCAATGGGCCCGAGAGAGGACGTGGGGCCCACTGGTAGAGGCGGTCAGGGCGTAACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

319

Start:

2607813  

End:

2608131

Strand:

+

>Chr2_LTR-Cassandra_65

TGTAACTCTCTGATTTAAGGAATATGGTGGTACATACGGAGAAGGTTTAAAAAAATTGATTTGGCCACCGATGTCACCAAAGTGCACTTATCTTTTCGGTCACACGTCCTAAGAGAACTCCATATTACCTTCCGAGAAATGATTGTCGGAACCATGCGAATGAGGACAAAGCATGGAGAAAGATTATGTGGTGATTTGTAGGGATAGTAACAAGTCTTTAAAGCCTCTCGTACGTGACGCATCGACCGTCGGACAAGGTGGGCCCATGGACCCGAGAGAGGAAGTGTGGCCCACTGGTAGGGGCGGTCGGGGCGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

2636201  

End:

2636555

Strand:

-

>Chr2_LTR-Cassandra_66

TGTAACGCCCCAACCGCCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCACCCCTGTCCGACGGTCGGTGCGCCACGTCTGAGAGGCTTTAAAGACTTGTTACCGACTCTACAAATCACCACATGATCTTTTCCCATGCTTTGTCCTCACTCGCATGGTTCCGAAAATCACTTCTCGGAAGGTCATCCATCCTGAAACTATTCCAGCTCAAGCACACTTAACTGTGGAGTTCTCTCAGGATCTTTGACCAAAAAGATAAGTGCACTTTGGTGACATAGTTGGCCAAATCAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTAAAACTGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

2636556  

End:

2636667

Strand:

-

>Chr2_LTR-Cassandra_67

ATTCATCCACACTAACAGATGGCAACGTCCTCGTTGCACAACAAGATCGTAACCCCCGATGGTGCTTGCCTTCTTTATTCCACACTCATCTGGGTTCGGCTCTGATACCATT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

2636668  

End:

2637022

Strand:

-

>Chr2_LTR-Cassandra_68

TGTAACGCCCCAATCGCCCCTACTAGTGGGCCCCACGTCCTCTCTCTTCCCCATGGGCCCACTCATGTCCGACAGTCGGTGCGCCATGTTCGGGAGGCTTTAAAGACTTGTTACCGACCCTACAAGTCACCACACGATCTTTCCCCATACTTTGTCTTCACTCGTATCGTTCGAAAATCACTTCTCGGAAAGTCACCCATCCTGAGACAACTCCAGCCCAAGCACGCTTAACTCTGGAGTTCTCTCAAGACCTTTAACCGAAAAGATAAGTGCACTTTAGTGACATAGATGACCAAATCAATTATTTTAAATCTCTCTGGATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

2664601  

End:

2664955

Strand:

-

>Chr2_LTR-Cassandra_69

TGTAACGCCCCAACCGCCCCTACCAGTGGGCCCCACGTCCTCTCTCGGGCCCATGGGCCCACCCCTGTCCGACGGTTGGTGCGCCACGTCTGAGAGGCTTTAAAGACTTGTTACCGACTCTACAAATCATCACATGATCTTTTCCCATGCTTTGTCCTCACTCGCATGGTTCCGAAAATCACTTCTCGGAAGGTCACCCATCCTGAAACTATTCCAGCTCAAGCACACTTAACTGTGGAGTTCTCTTAGGATCTTTGACCAAAAAGATAAGTGCACTTTGGTGACATAGTTGGCCAAATAAATTCTTTTAAACCTCTCCGCATGCACCACCATATTCCTAAAACTGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

2664956  

End:

2665067

Strand:

-

>Chr2_LTR-Cassandra_70

ATTCACCCACACTAACAGATGGCAACGTCCTCGTTGCACAAAAAGATCGTAACCCCCGATGGTGCTTGCCTTCTTTATTCCACACTCATCTGGGTTCGGCTCTGATACCATT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

355

Start:

2665068  

End:

2665422

Strand:

-

>Chr2_LTR-Cassandra_71

TGTAACGCCCCAATCGCCCCTACTAGTGGGCCCCACGTCCTCTCTCTTCCCCATGGGCCCACTCCTGTCCGACAGTCGGGGCGCCATGTTCGGGAGGCTTTAAAGACTTGTTACCGACCCTACAATTCACCACACGATCTTTCCCCATGCTTTGTCCTCACTCGTATCGTTCGACAATCACTTCCCGGAAAGTCACCCATCCTGAGACAACTCCAACCCAAGCACGCTTAACTCTGGAGTTCTCTCAGGACCTTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGATGACCAAATCAATTATTTTAAATCTCTCTGAATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

3216760  

End:

3217115

Strand:

+

>Chr2_LTR-Cassandra_72

TGTAACACTCCAGTTTCAGGAATATAGTGATGCATGCGGAGAGGTTTAAAAGAATTGATTTGGCCACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAAACGTCTTTAGAGAACTCCACAGTTAAGCGTGTTTGCGCTGGATTAGTTTCAGGATGGTTGACCTTCTAGGAAGTGATTGTCGGAACCATGCAGGTGAGGACAAAGCATGGAAAAAAATCATGTGGTGATTTGTGGGGTCGTTAACAAGCCTTTAAAGCCTCCTAGACACGGCGCACCGACCGTCTGACAGGGGTGGGCCCATGGGCCTGAGAGAGAACGTGAGGCCCACTGTTAAGGGCGGTCGAGGCGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

300

Start:

5160886  

End:

5161185

Strand:

-

>Chr2_LTR-Cassandra_73

GACCGCCCCTACTAGTGGGCCCCACGTCCTCTCTTGGGCCCATGGGCCCACCACTGTCCGATCCTACAAATCACCACATGATTTTTCCTCATGGTTTGTCCTAACTTGCATGGTTCCGACAATCACTTCCCAGAAGGTCATCCATCCTTAAACTACTTAAGCCCAAGCACGCTTAACTGAGGAGTTCTCTCAAGATGTTTGACAGAAAAGATAAGAGCACTTTGGTGACATAGGTGGTCAAATCAATTCTTTTAAACCTCTCTGCATTCACCACCATATTCTTGAAACCGGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

112

Start:

5161186  

End:

5161297

Strand:

-

>Chr2_LTR-Cassandra_74

ATTCACCCCCACTAACAGATCGCAACGTCCTCGTTGTGCACCAAGACTGTCACCCCCTACGGTTTGAGCCTTCTTGACTGCACATTTGTATGGTTTTGGCTCTAATACCACT

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

338

Start:

5177555  

End:

5177892

Strand:

+

>Chr2_LTR-Cassandra_75

AACATCTTGTTTTAGGAAATAAAATGTTGCATGAGGAGAGCTTAAAATAATTGATTTAGCCATTTACTGTTATCATCTTTTCGGTCAAAAATCATAAGAGAATCTACACTTAAACGTACTTGAGTTGAAACGATTTCATGATTGGTGATCTATTGGAAGTGATTGTCGATAGCGTGTGAATGAGAACAAAACATGGAAATAAATCACATGATTATTTTTAAGGGCGGCAAACAAGTCTTTAAAATCTCTGGAAGTAGCGTTTTGGCCGTCGGAAAAGAGTGGTACACAGACCTAGAGAAAACATAGGACTAACTAAGGATGACGGTTGAGAAATTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

356

Start:

5322777  

End:

5323132

Strand:

-

>Chr2_LTR-Cassandra_76

TGTAACGCCTCAACCGCCCCTACCAATGGGCCTCACGTCCTCTCTCGGGCCCATGGGCCCACCTCTGTCCGACGGTGGGTGAGCCATGTGCGAGAGGCTTTAAATACTTGTTACCGACCCTTCAAATCACCACATGATCTTTCCCCATGCTTTGTCCTCATTCACATTGTTCCGATAATCACTTCCCGGAAGGGTCACCCATCCTGAAACTACTCTATCCCAAGTACGCTTAACTGTGGAGTTCTCTCAAGATGTTTGATAGAAAAGATAAGTGCAATTTGGTCACATAGGTGGCCAAATCAATTCTTCAAACTTCTCCGCATGCACCACCATATTCCTGAAACCGGGGTGTTACA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

88

Start:

5803784  

End:

5803871

Strand:

+

>Chr2_LTR-Cassandra_77

TAACACATCAATTTTTGAAAATATGTTGGTGCATGTGAACAATGCAAAAGGGTTTAAGAGAATTGATTTGGTCATTTATGTCATAAAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

128

Start:

8082981  

End:

8083108

Strand:

+

>Chr2_LTR-Cassandra_78

TATAAAACCCATGTTTCAAGAATATGGTGTTGAATGTAAAAAGGTTTAAATGAATTGATTTAGCTACCTATGTCATCAAAGTCCACTTATCTTTTCGGTCAAAAGTCTTTAGAGAATTTCATAGTTAA

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

297

Start:

8248954  

End:

8249250

Strand:

-

>Chr2_LTR-Cassandra_79

TGTAACGCCTCAGTCCCTTCTTAGTGAGGCCCACGTCTTCTCCGGTTTGTGAGTCCATCCTTATCCGACAATCCTTATCCGACAGTCCGTATACTATGTCTAAAGATTTTAAGGACTTGTTTATCCATCCTACAAGTTATCATATAATTTTTTCGTGATTGTATAGTTTCGACAATCATTTCTTAGAATATCACCTGTCTTGAAATTGCTCTAGTATAAATACGTTTAACTGTAAAATTCTTTCGGGATATTTAACCAAAGAAATAAATGCATTGTGGTGACATATATGACCAAATC

Arabidopsis thaliana (TAIR 10)

ID:

Chr2_LTR-Cassandra_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

93

Start:

8560535  

End:

8560627

Strand:

-

>Chr2_LTR-Cassandra_80

TGTAACACCTCGACCATCCATAATAGTGATTATTTACGTTCTCTTTTGGTCCGTGAGTCCTCTCCTATCTGACGGTCGGTTCGCTACGACCGG