ID Class Order Superfamily Length Start End Strand View
scaffold_1_SINE-tRNA_41 RetrotransposonsSINESINE-tRNA17080470148047183-
scaffold_1_SINE-tRNA_42 RetrotransposonsSINESINE-tRNA8782697478269833+
scaffold_1_SINE-tRNA_43 RetrotransposonsSINESINE-tRNA33883070718307408-
scaffold_1_SINE-tRNA_44 RetrotransposonsSINESINE-tRNA34687411598741504-
scaffold_1_SINE-tRNA_45 RetrotransposonsSINESINE-tRNA14990858219085969-
scaffold_1_SINE-tRNA_46 RetrotransposonsSINESINE-tRNA18490951919095374-
scaffold_1_SINE-tRNA_47 RetrotransposonsSINESINE-tRNA34690980789098423-
scaffold_1_SINE-tRNA_48 RetrotransposonsSINESINE-tRNA13391401769140308+
scaffold_1_SINE-tRNA_49 RetrotransposonsSINESINE-tRNA34691604389160783-
scaffold_1_SINE-tRNA_50 RetrotransposonsSINESINE-tRNA34592560669256410+
scaffold_1_SINE-tRNA_51 RetrotransposonsSINESINE-tRNA16893184609318627+
scaffold_1_SINE-tRNA_52 RetrotransposonsSINESINE-tRNA10494866569486759-
scaffold_1_SINE-tRNA_53 RetrotransposonsSINESINE-tRNA34495706489570991+
scaffold_1_SINE-tRNA_54 RetrotransposonsSINESINE-tRNA34596585869658930+
scaffold_1_SINE-tRNA_55 RetrotransposonsSINESINE-tRNA34596998529700196+
scaffold_1_SINE-tRNA_56 RetrotransposonsSINESINE-tRNA33297558169756147+
scaffold_1_SINE-tRNA_57 RetrotransposonsSINESINE-tRNA1531014302910143181-
scaffold_1_SINE-tRNA_58 RetrotransposonsSINESINE-tRNA3041032630410326607-
scaffold_1_SINE-tRNA_59 RetrotransposonsSINESINE-tRNA1701068066410680833+
scaffold_1_SINE-tRNA_60 RetrotransposonsSINESINE-tRNA3451077261510772959+

< 3 4 5 6 7 > Total 88


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_41

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

8047014  

End:

8047183

Strand:

-

>scaffold_1_SINE-tRNA_41

TTTTTTTTTTTTTTAATAACCGCGGGTCTCCCAAAAGTTTCTTAGGCCCAAGAACTAATTCCACGAGGCTGGCAATTCCCCTATGTAAATCTGCCAGTGGCCGTGTCTCGAACCCTGGTGGCGGAAGTCACAGTTGTGACCCCTTTACCACTAGGCCACAAGGCCCGGCT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_42

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

87

Start:

8269747  

End:

8269833

Strand:

+

>scaffold_1_SINE-tRNA_42

AACCAACGCATTGTTGGCCCAGTGATAAAGGAAGTGTTAGTAGCATTCCGCCACTCGGGTTGCGTTGGCCACCAGGAATTTAACATG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_43

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

338

Start:

8307071  

End:

8307408

Strand:

-

>scaffold_1_SINE-tRNA_43

GTCGTCTGCATTTATTATTTATTGCAAATTATGAAAACTGTTATATAGACGATTTTACAACGAACAATTCATTCCGACTCTTATTAGATCTACGATCGCATTCTTCATGCTCACCTCCTCACTTCGTTCTTCATGGTTTTTGATGGACACTTCTTTTTCTGTGTGGAATCCTGGCGAACGGCTATAATAGTACATCGCTGGAGATCTCCTGCACACTTGCCTCCAATAATCTGCAAATTTATTAATATATTGTAG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_44

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

346

Start:

8741159  

End:

8741504

Strand:

-

>scaffold_1_SINE-tRNA_44

GTCGTCTAAATTTATTACTAATTGCAAAATTATGAGAACTATTACATAGACGATTTTACAACTGATAATTCTTTCCGATTTTTACTAGATTCACGACAGACTACACTTCCTTCTTCGTGATCTTGATGAATACCAACATGATCCACAACCTGGCGACACTTCCTTCTCTGCGTAGAATCCTGGCGAACGGCTATAATTGTACATCGTTGGAGATCTCTTGCACATTTGCCTCCATTAATATGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_45

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

149

Start:

9085821  

End:

9085969

Strand:

-

>scaffold_1_SINE-tRNA_45

AACCCAGTATCCAGACCACACAGTGATCTGACTAATCCACTGGGCCTAAGCCCGCGTCACAGGGATTTTTAACCTCTACTTAAGGGCCCCTGATAAACTGGTGGTCTGGGGCGCCTGAGCAAGTCCGCAAATAAATTCCCAGATGGCCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_46

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

184

Start:

9095191  

End:

9095374

Strand:

-

>scaffold_1_SINE-tRNA_46

TTTTTTTTTTTTTTTTGTAAACTAGGAAATTTCGGACCGAAACATATACATTAACTTCCTAGACTTGGACCCGCTTTTAATATTTGTACCATATCAGCTGTCACTCGATTAATTATGTGACTTTTTAGAATTTTCCACGATATTTTTCCAGGATATTTTTCCAATTGAACTATCGACATCTAGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_47

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

346

Start:

9098078  

End:

9098423

Strand:

-

>scaffold_1_SINE-tRNA_47

GTCGTCTAGATTTATTATTAATTGCAAATTATGAGAACTGTTACATAGACGATTCTACAACTGTCAATTCCTTCCAACCCTTACTAGATTCATGACAGACTACACTTCTTTCTTCGTAATCTTGATGAATACATTCAATGATCCACGACCTGGCGACACTTTCTTCTCTGCGTAGAATCCTGGCGAACGGCTATAATTGTACATCGCTGGAGATTTCTTGCACACTTGCCTCCATTAATCTGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_48

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

133

Start:

9140176  

End:

9140308

Strand:

+

>scaffold_1_SINE-tRNA_48

TTTTGGTCCAGTGGTAAAGAAGAGAAAAGTCTCCGCCACCTGGGTTCAAGTAGCATTGGCCACCGGAGTTCGAATTTTAACATGGTTTTCCCGGGCTCCAGGATTAGTTTTTGGGCCTATAAAGCCTTTAGGA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_49

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

346

Start:

9160438  

End:

9160783

Strand:

-

>scaffold_1_SINE-tRNA_49

GTCGTCTAGATTTATTATTAATTGCAAATTTTGAGAACTGTTACATAGACGATTCTACAACTGACAATTCCTTCCGACCCTTATTAGATCTACGACAGACTACACTTCTTTCTTCATAATCTTGATGAATACCTTCAATGATCCATGACCTGGCGACACTTCCTTCTCTGCGTAGAATCTTGGCGAACGGCTATAATTGTACATCGCTGGAGATCTCCTGCACACTTGCCTCTATTAATCTGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_50

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

9256066  

End:

9256410

Strand:

+

>scaffold_1_SINE-tRNA_50

GTGGAAGCCTCCTTGGTCCATTGGTTGACCAAAGGTTAATTAATGTTTATACACCAAGAGGTCTGGGGTTCGAGTCCCAGATATTACGATTTATTAATAAATTTGCAGATTAAAGGAGGCAATTGTGCATGAGATCTCCAGCGAAGTACAATTATAGCCGTTCGCCAGGATTCTACGCAGAGAGAGAAGTGTCGTCAGGTCGTGGATCATTGAAGGTGTCCGTCAAGAGCATGGAGAAGGAAGTGTCGTCTGTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_51

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

168

Start:

9318460  

End:

9318627

Strand:

+

>scaffold_1_SINE-tRNA_51

AACCGGGCCTTGTGGCCTAGTGGTAAAGGGGTCACAGCTGTGACTTCCGCCACCAGGGTTCGAGGCACGGCCACTGACAGGTTTACATAGGGGAATTGCCAGCCTCGTGGGATTAGTTCTTGGGCCTAGGAAGCCTTTGGGAGACCCGCGGTTATTAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_52

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

104

Start:

9486656  

End:

9486759

Strand:

-

>scaffold_1_SINE-tRNA_52

TTCTTTTCTTTTTTAATAACTGCGGGTCTCTCAAAGGCTTCCTAGACCCAAGGACTAATCCCACGAGGCTGGCAATTCCCCTATGTAAACCTGCCAGCAGTGCC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_53

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

344

Start:

9570648  

End:

9570991

Strand:

+

>scaffold_1_SINE-tRNA_53

GTGGAAGCCTCGTTGACTCATAGGTTGACTAAGGGTTAATTAATGCTTATACACCAAGAGGTATGGGGTTCGAGTCCCAGATACTGCGATTTATTTACCAATTTGCAGATTAATGGAGACAAGTGTGCAGGAGATCTCCAGCGATGTACAATTATAGCCGTTCGCCAAGATTCTACGTAGAGAAGGAAGTGTCGTCAGGTCGTGAATCATCGAAGGTGTCTATCAAGAGCATGAAGAAGGAAGTGTCGTATGCGT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_54

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

9658586  

End:

9658930

Strand:

+

>scaffold_1_SINE-tRNA_54

GTGGAAGCCCCCTTGGCTCATTGGTTGATCAAGGGTTAATTAATGCTTCCACACCAAGAGGTTTGGGGTTCGAGTCCCAGGTACTGTGATTTATTAATAAATTTGCAGATTAATGGAAGCAAGTGTGCAGGAGATCTTCAGCGATGTACAATTATAGCCGTTCGCCAGGATTCTACGTAGAGAGAGAAGTGTCGTCAGGTCGTGGATCATTGAAGGTGTCCGTCAAGAGCATGAAGAAAGAAGTATCATCTATCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_55

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

9699852  

End:

9700196

Strand:

+

>scaffold_1_SINE-tRNA_55

GTGGAAGCGCTCTTGGCCCATTGGTTGACTAATGGTTAATTAATGCTTCTACACCAAGAGGTTTGGGGTTCGAATCCCAGATATTGCGATTTATTAATAAATTTGCAGATTAAAGGAGGCAAGTGTGCAGGAGATCTCTAGCGAAGTACAATTATAGCCGTTCGCCAGGATTCTACGCAGAGAGAGAAGTGTCGTCAGGTCGTGGATCATTGAAGGTGTCCGTCAAGAGCATGGAGAATGAAGTGTCGTCTGTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_56

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

332

Start:

9755816  

End:

9756147

Strand:

+

>scaffold_1_SINE-tRNA_56

GTGGAAGTTCTTTTGACCCATTGATTGACTAAAGGTTAATTAATGCTTCTACACCAAGAGGTCTAAGCTTCGAATCCCAGATATTGCGATTTATTAGTAAATTTGCAGATTAATGGAGGCAAGTGTGCAAGAGATTTCCAGCGATGTACAATTATAGCCGTTAGCCAGGATTCTACGCAGAGAGAGAAGTATCGTCAGATCTTGGATCGTTGAAGATGTCCGTCAAGAGCATGAAGAAGGAAATGTCGTTTATCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_57

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

153

Start:

10143029  

End:

10143181

Strand:

-

>scaffold_1_SINE-tRNA_57

ATAACCCAGTATCCAGACCACACAGTGATCTGACTAGCCCACTGGGCCTAAGCCCACGTCACATGGATTTTTAAGCCTCCACTTAAGGGCCCCATGATAAACTGGTGGTCTGGGGCGCCTGAGCAAGTCCGCATGTAAATTCCCAGGTGGCCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_58

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

304

Start:

10326304  

End:

10326607

Strand:

-

>scaffold_1_SINE-tRNA_58

GTCGTCTAGATTTATTATTAATTGCAAATTATGAGAACTGTTACATAGACGATTCTACAACTGACAATTCCTTCCGACCTTTACTAGATCCACGACAGACTACACTTCCGTGACACTTCCTTCTCTGCGTAGAATCCTGGCGAACGGCTATAATTGTATATCGCTGGAGATCTCTTGCACACTTGCCTCCATTAATCTGCAAATTTATTAATAAATCGCAATACCTGGGACTCGAACCCCAGACCTCTTGGTGTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_59

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

10680664  

End:

10680833

Strand:

+

>scaffold_1_SINE-tRNA_59

AACCGGGCCTTGTGGCCTAGTAGTAAAGGGATCACAGATGTGACTTCCGCCACCAGGGTTCGAGGCACGGCCACTGGCAGGTTTACATAGGGGAATTGCCAGCCTCGTGGGATTAGTTCTTGGGCCTAGGAAGCTTTTGGGAGACGCGCGGTTATTCAAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_60

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

10772615  

End:

10772959

Strand:

+

>scaffold_1_SINE-tRNA_60

GTGGAAGCCCTCTTGGCCCATTGGTTGACTAAGGGTTAATTAATGCTTCTACACCAAGATGTCTGGGGTTCGAGTCCCAGGTATTGCGATTTATTAATAAATTTGCAGATTAAAAGAGGCAAGTGTGCATGAGATCTCCAGCGAAGTACAATTATAGCCGTTCGCCAGGATTCTACGCAGAGAGAGAAGTGTCGTCAGGTCGTGGATCATTGAAGGTGTCCGTCAAGAGCATGGAGAAGGAAGGGTCGTCTGTCG