ID Class Order Superfamily Length Start End Strand View
scaffold_1_SINE-tRNA_81 RetrotransposonsSINESINE-tRNA1581324213613242293+
scaffold_1_SINE-tRNA_82 RetrotransposonsSINESINE-tRNA3471352073813521084-
scaffold_1_SINE-tRNA_83 RetrotransposonsSINESINE-tRNA2351354733513547569+
scaffold_1_SINE-tRNA_84 RetrotransposonsSINESINE-tRNA2261356103313561258+
scaffold_1_SINE-tRNA_85 RetrotransposonsSINESINE-tRNA1101356135913561468+
scaffold_1_SINE-tRNA_86 RetrotransposonsSINESINE-tRNA3451371129813711642+
scaffold_1_SINE-tRNA_87 RetrotransposonsSINESINE-tRNA1701388461713884786+
scaffold_1_SINE-tRNA_88 RetrotransposonsSINESINE-tRNA1441405599414056137-
scaffold_1_SINE-tRNA_89 RetrotransposonsSINESINE-tRNA891417008214170170+
scaffold_1_SINE-tRNA_90 RetrotransposonsSINESINE-tRNA1051419455014194654+
scaffold_1_SINE-tRNA_91 RetrotransposonsSINESINE-tRNA3431423455914234901+
scaffold_1_SINE-tRNA_92 RetrotransposonsSINESINE-tRNA2901430876914309058-
scaffold_1_SINE-tRNA_93 RetrotransposonsSINESINE-tRNA1701435378814353957+
scaffold_1_SINE-tRNA_94 RetrotransposonsSINESINE-tRNA3451454025614540600+
scaffold_1_SINE-tRNA_95 RetrotransposonsSINESINE-tRNA1221465271314652834+
scaffold_1_SINE-tRNA_96 RetrotransposonsSINESINE-tRNA1191492914214929260-
scaffold_1_SINE-tRNA_97 RetrotransposonsSINESINE-tRNA3511509213515092485+
scaffold_1_SINE-tRNA_98 RetrotransposonsSINESINE-tRNA1461519632215196467+
scaffold_1_SINE-tRNA_99 RetrotransposonsSINESINE-tRNA1201577778915777908-
scaffold_1_SINE-tRNA_100 RetrotransposonsSINESINE-tRNA2171577793815778154-

< 5 6 7 8 9 > Total 88


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_81

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

13242136  

End:

13242293

Strand:

+

>scaffold_1_SINE-tRNA_81

ACCAAAGTTGTGTTGGTCCAGTGGTAAATCTCTTAGGTGGAGGTACTGGATTCGACTCCCGTTGGAAGGAATATCTTCTTCAAAAGAAATGAATTTAACTTGGTATGAGTCCCGCCTCTAGAAGATGTGAGGCTTTGGACTTGAACTTCTAGATTTTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_82

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

347

Start:

13520738  

End:

13521084

Strand:

-

>scaffold_1_SINE-tRNA_82

GTCGTCTAAATTTATTATTAATTGCAAATTATGAGGACTGTTACATAGACGATTCTACAACTGACAATTTCTTCCGACCCTTACTAGATTCACGATAGACTACACTTCCTTCTTCGTAATCTTGATGAATACCTTCAATGATCCACGATCTGGCGACACTTCCTTCTCTGCGTAGAATCCTGGCGAACGGCTATAATTGTACATCGCTGGAGATCTCTTGCACACTTGCCTCCATTAATCTGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_83

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

235

Start:

13547335  

End:

13547569

Strand:

+

>scaffold_1_SINE-tRNA_83

GTGGAAGTCTCTTTGGCCCATTGGTTGACCAATGGTTAAATAGTCCCAGATATTGCGATTTATTAATAAATTTGCAGATTATTGGAGGTAAGTGTGCAGGAGAGCTCCAGCGATGTATAATTATAGCCGTTCGTCAGCATGAAGAATGAGGTGAAGGAAGTGAGCATGAAGAAGGAGATATCGTCTGTCATGGATCTAATAAGGGTCGGAAGGAATTGTCCGTTGTAGAATCGTC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_84

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

226

Start:

13561033  

End:

13561258

Strand:

+

>scaffold_1_SINE-tRNA_84

GTGGAAGCCCCTTGGCCTATTGGTTGACCAATGGTTCATTAATGTTTCTACACCTAGAGGTCTGGGGTTCGAGTCGTAGATAGTGTGATTTATTAATAAATTTGCAGATTATTCGAGATAAGTGTGCAAGAGATCTCCAAAGATGTACAATTATAGCCGTTCGCCAGGATTCTACACAGAGAAGGAAGTGTCCATCAAGAGCATGAAGAAGGAGATGAACGAGGTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_85

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

110

Start:

13561359  

End:

13561468

Strand:

+

>scaffold_1_SINE-tRNA_85

GAAGGAATTGTCTGTTGTAACAGATAATAGGGGTCGGAAGGAATTGTCTGTTGTAGAATTGTCTATGTAACAGTTCTCAGAATCTTAAATAAATAATAAATCCAGATGAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_86

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

13711298  

End:

13711642

Strand:

+

>scaffold_1_SINE-tRNA_86

GTGGAAGCCCCCTTGGCCATTAGTTGATCAAGGGTTGATTAATGCTTCTACACCAAGAGGTCTGGGGTTTGTGTCCCAGATATTGCGATTTATTAACAAATTTGCAGATTAATGGGGGCAAGTGTGCAAGAGATCTCCAGCAATGTACAATTATAGCCGTTCGACAGGATTCTACACAGAGAAGGAAGTGTCGCCAGGTCGTGGATCATTGAAGGGTATTCATCAAAATCACGAAGAAGGAAGTGTTGTCTGTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_87

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

13884617  

End:

13884786

Strand:

+

>scaffold_1_SINE-tRNA_87

AACCGGGCCTTGTGGCCTAGTGGTAAAGGGGTCACAGCTGTGACTTCCGCCACCAGGGTTCAAGGCACGGCCACTGGCAGGTTTACATAGGGGAATTGCCAGCCTCGTGGGATTAGTCTTTGGGCCTAGGAAGCCTTTGGGAGACCCGCGGTTATTCAAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_88

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

144

Start:

14055994  

End:

14056137

Strand:

-

>scaffold_1_SINE-tRNA_88

TTTTTTTTTTTTTTTTTTTGAATACCAGGAAGTTCTAGGCCAAAGCATGTAATGCTTACAGGCCTGAAACCACATCATGTAATATTAGTTTTGTCCCAAACGTCACTCGAACCAACGACCTCTAAGCTTCACCTAGGATCTTTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_89

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

89

Start:

14170082  

End:

14170170

Strand:

+

>scaffold_1_SINE-tRNA_89

AACCACGAGTTGTCTCCTAGTGGTAAAGGGCCTCTAGCTGGGGGTACCGCCACCTGGGTTCGATTCCTGGCAACTGCGGAATTCACATG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_90

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

14194550  

End:

14194654

Strand:

+

>scaffold_1_SINE-tRNA_90

TCGTGGTCTGGTGGTAAAAGGCTCACAGCTGTGAGTACCGCCACCAGGATTCGATTCCTGGCCACAGCGGATTTAACCTGGCTTCCGTTTGGCTTCCAGGACCAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_91

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

343

Start:

14234559  

End:

14234901

Strand:

+

>scaffold_1_SINE-tRNA_91

GTGGAAGCCCCTTCGGCCCATTGGTTGACCAAGGGTTAATTAATGCTTCTACACCAAGAAGTCTGGGGTTCGAGTCCCAGATATTGCGATTTATTTAAATTTGCAGATTAAATGAGGCAAGTGTGCATGAGATCTCCAGCGAAGTACAATTATAGCCGTTCGCCAGGATTCTACGCAGAGAGAGAAGTGTCGTCAGGTCGTGGATCATTGAAGGTGTCCGTCAAAAGCATGAAGAAGGAAGTGTCGTCTGTCGTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_92

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

290

Start:

14308769  

End:

14309058

Strand:

-

>scaffold_1_SINE-tRNA_92

CGTCTAGATTTATTATTTATTGCAAATTATGAGAACTGTTACATAAACGATTCTACAACGGACAATTCCTTCCGACCCTTATTAGATCCATGACCTGACGACACTTCTCTCTCGGCGTAGAATCCTGGCGAACGACTATAATTGTACTTCACTGGAGATCTCCTACATACTTGCCTCATTTAATCTGCAAATTTATTAATAAATCATAATATCTGGGACTCGAACCCAAACCTCTTGATGTAGAAGCATTAATTA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_93

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

14353788  

End:

14353957

Strand:

+

>scaffold_1_SINE-tRNA_93

AACCGGGCCTTGTGGCCTAGTGGTAAAGGGGTCACAGCTGTGACTTCCGCCACCAGGGTTCGAGGCACGGCCACTGGCAGGTTTACATAGGGGAATTGCCAGCCTCGTGGGATTAGTCCTTAGGCCTAGGAAACTTTTGGGAGACCCGCAGTTATTCAAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_94

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

14540256  

End:

14540600

Strand:

+

>scaffold_1_SINE-tRNA_94

GTGGAAGCCCCCTTGGCCCATTGGTTGACCAAGAGTTGATTAATGCTTCTACACCAAAAAGTCTAAGGTTCGAGTCCCAGGTATTGCGATTTATTAACAAATTTGCAGATTAATGGAGGCAAGTTTGCAAGAGATCTCCAGCGATGTACAATTATAGCCGTTCGTCAGGATTCTACGCAGAGAAGGAAGTGTCGCCAGGTCGTGGATCATTGAAGGTATTCATCAAGATTACGAATAAGGAAGTGAAGTCTGTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_95

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

122

Start:

14652713  

End:

14652834

Strand:

+

>scaffold_1_SINE-tRNA_95

GCAAAGTTTAGAGATCGCCAGTTCAAGTGATGTTTGGGACGAAACTAATATTACATGCTATAGTTTTAAATGTGGAGGATTATGAGATTTGGTCCAGAATCTTTTAGTATTAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_96

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

119

Start:

14929142  

End:

14929260

Strand:

-

>scaffold_1_SINE-tRNA_96

TTTTTTTTTTGAATAACCGCGGGTCTCCCAAAAGCTTCCTAGGTCCAAGGACTAATCCCACGAGGCTGGCAATTCCCCTATGTAAACCTGCCAGTGGCCGTGCCTCGAACCCTGGTGGC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_97

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

351

Start:

15092135  

End:

15092485

Strand:

+

>scaffold_1_SINE-tRNA_97

GTGGAAGCCCCCTTGGCCCATTGGTTGATCAATGGTTAATTAATGCTTCTACATCTAGACGTCTGAGGTTCGAGTCCCAGATACTGCGATTTATTAATATATTTACAGATTATTGGAGGCAAGTGTGCATGAGATCTCCAGCGATGTACAATTATAGCCGTTCACCACGATTCTACGCAGAGAGTGAAGTGTCCATCAAGAGCATGAAGAAGGACCTGAAAGAGGTGATCATGAAGAAGGAGATGAATAGGTGAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_98

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

146

Start:

15196322  

End:

15196467

Strand:

+

>scaffold_1_SINE-tRNA_98

AATTGGTAAAGATAATAGGCGAAGCTTATAAGTTATTGGTTCGAATGACGTTTGGGGCAAAACTAATATTACATGCAGTGGTTTCGAATCTGGAGAAATACGGGATTTGGTCCAAAAAATTTTGATATTAAAAAAAAAATAGAGAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_99

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

120

Start:

15777789  

End:

15777908

Strand:

-

>scaffold_1_SINE-tRNA_99

TCTGAATTTATTATTTATTGCAAATTATGAGAACTGCTACATAGACGATTCTAATACGGACAATTCCTTCCGACCCTTATTAGATCCACGACCTCTTTCACCTTCTTCACCTCTTTCATG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_100

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

217

Start:

15777938  

End:

15778154

Strand:

-

>scaffold_1_SINE-tRNA_100

CATCTCCTTCACCTCCTTCTTCATGGACACTTCCTTCTCTGTGTGGAATCCTGGCGAACGGCTATAATTGTACATCGCTGGAGATCTCCTGCACACTTGCCTCAATAATCTGCAAATTTATTAATAAATTACAGTATCTGGGACTCGAACCCCAGACCTCTAGGTGTAGAAGCATTAATGAACCCTTAGTCAACCAATAGACTAAGGGGACTTTCAC