ID Class Order Superfamily Length Start End Strand View
scaffold_1_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA15947591104759268+
scaffold_1_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA15349019114902063-
scaffold_1_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA10649345324934637-
scaffold_1_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA38253860315386412+
scaffold_1_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA14155998555599995-
scaffold_1_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA17056108245610993-
scaffold_1_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA16857501235750290-
scaffold_1_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA34758249005825246-
scaffold_1_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA34759157315916077-
scaffold_1_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA26359711175971379+
scaffold_1_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA9260263226026413-
scaffold_1_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA13160264176026547-
scaffold_1_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA34764931096493455+
scaffold_1_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA12965214936521621-
scaffold_1_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA16365935016593663-
scaffold_1_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA15765998546600010+
scaffold_1_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA17070494597049628-
scaffold_1_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA34570908457091189+
scaffold_1_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA17478718407872013-
scaffold_1_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA33679811737981508+

< 2 3 4 5 6 > Total 88


Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

4759110  

End:

4759268

Strand:

+

>scaffold_1_SINE-tRNA_21

ACCAAGTGTCGTTAGGGTAAAGACTCTAGGCGAAACTTAGAGGTCGTTGGTTCGAGTGACGCTTGGAACGAAACTAATATTACATGTTGTGGTTTCGGACCTGGGGGGATTACGGGCTTTGGCCCAAAACCTCCTGGTATTCAAAAAAAAAAGAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

153

Start:

4901911  

End:

4902063

Strand:

-

>scaffold_1_SINE-tRNA_22

ATAACCCAGTATCCAGACCACACAATGATCTGACTAGCCCATTGGGCCTAAGTCCGCGTCACAGGGATTTTTAAGCATCCACTTAAGGGCCCCCTTATAAACTGGTGGTCTGGGGCGCCTGAGCAAATCCGCAGGTAAATTCCCAGGTGGCCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

106

Start:

4934532  

End:

4934637

Strand:

-

>scaffold_1_SINE-tRNA_23

GAGGCCTGCGGAGCACCAATGTGAATACGCAGTGGCCAGGAATCGAACCCTGGTGGCGGTACTCACAGCTGTGAGCCCTTTACCACCAGACCACGACCGTCTGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

382

Start:

5386031  

End:

5386412

Strand:

+

>scaffold_1_SINE-tRNA_24

GTGGAATCCCCCTTGGCCCAATGGTTGATCAATGGTTAATTAATGCTTTTACACCAAGAGGTCTGGGGTTTGAGTCTTAGATACTGCGATTTATTAACATATTTGCAGATTAATCGAGGCAAGTGTGCAAGAGATCTCCAGCGAAGTACAATTATAGCCGTTCGCTAAGATTCTACGCAGAGAGGAAAGTGTAGCCGTTCGCCAGGATTCTATGCAATGAGAGAAGTATCGTCAAGTCGTGTATCATTGAAAGTG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

141

Start:

5599855  

End:

5599995

Strand:

-

>scaffold_1_SINE-tRNA_25

TTCCTAGGCCCAAAGACTAATCTACGAAGTCTTGCATCTGGGTACGCTTTACCCCATTGTTAAGGGAGCGGGTAGGTGGCCAACCTGAATCGAACCCAGGAGGGGGAACTCACAGCCGTGAGCCCTTTACCAACTGGACCA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

5610824  

End:

5610993

Strand:

-

>scaffold_1_SINE-tRNA_26

TTCTTTTTTTTTTGAATAACCGCGGGTCTCCCAAAGGCTTCCTAGGCCCAAGGACTAATCCCACGAGACTGGCAATTCCCCTATGTAAACCTGTCAGTGGCCGTGCCTCGAACCCTGGTGGCGGAAGTCACAGCTGTGACCCTTTTACCACTAGACCACAAGGCCCGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

168

Start:

5750123  

End:

5750290

Strand:

-

>scaffold_1_SINE-tRNA_27

TTTTTTTTTTTTGAATAACTGCGGGTCTCCCAAAGGCTTCCTAGGCCCAAGGACTAATCCCACGAAGCTGGCAATTCCCCTATGTAAACCTGTCAGTGGTCGTGTCTCGAACCCTGGTGGCGGAAGTCACAGATGTAACCCTTTACCACTAGGCCACAAGGCCCGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

347

Start:

5824900  

End:

5825246

Strand:

-

>scaffold_1_SINE-tRNA_28

GTCGTCTAGATTTATTATTAATTGCAAATTATGAGAACTGTTACATAGACGATTCTACAACTGACAATTCCTTCCGACCCTTATTAGATTCACGACAGACTACACTTCCTTCTTCGTAATCTTGATGAATACCTTCAATGATCCACGACCTGTCGACACTTTCTTCTCTGCGTAGAATCCTAGCGAACGGCTATAATTGTACATCGTTGGAGATCTCTTGCACACTTGCCTCCATCAATCTGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

347

Start:

5915731  

End:

5916077

Strand:

-

>scaffold_1_SINE-tRNA_29

GTCGTCTAAATTTATTATTAATTGCAAATTATGAGAACTGTTACATAGACGATTCTACAACTGACAATTCCTTTCGACCCTTACTAGATCTACGACAGACTACACTTTCTTTTTCGTGATCTTGATGAATACCTTCAATGATCCACGACCTGGCGACACTTCCTTCTCTGCGTAGAATCCTGGCGAACAGCTATAATTGTACATCGCTGGAGATCTCTTGCACACTTGCCTCCATTAATCTGCAAATTTGTTAAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

263

Start:

5971117  

End:

5971379

Strand:

+

>scaffold_1_SINE-tRNA_30

GTAGAAATCTCCTTGGTCAATTGGTTGACTAAGGGTTCATTAATATTTTTACACCCAGAGGTCTAGGGTTCGAGTTCCAGACATTACGATTTATTAATAAATTTGCAGATTATTGGAGGCAAGTGTGCAGAAGATTTCCAGCAATGTACAATTATAGCCGTTTGCTAGGATTCTACACAGAGGTGGAGGTGAAGGAGGTGAGCTTGTAGAATCGTCTATGTAATAGTTCTCATAATTTGCAATTAATAATAGATT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

92

Start:

6026322  

End:

6026413

Strand:

-

>scaffold_1_SINE-tRNA_31

TCTGGATTTATTATTTATTGCAAATTAGCATAACTGTTATATAGACGATTCTACAACGGACAATTCCTTCTGACCCTTATTAGATCCACGAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

131

Start:

6026417  

End:

6026547

Strand:

-

>scaffold_1_SINE-tRNA_32

TTTCCTGCACACTTGCCTCCAATAATCTGCAAATTTATTAATAAATCGCAGTATCTGGGATACAAACCCCAAACTTCTGGGTGTAAAACCATTAATGAACCTAGTCAAGCAATGGCCAAAAAGGCTTCCAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

347

Start:

6493109  

End:

6493455

Strand:

+

>scaffold_1_SINE-tRNA_33

GTGGAAGCCCCTTTGGCCCATTGGTTGATCAAAGGTTGATTAATGCTTCTACACTAAGAGGTCTGGAGTTCGAGTCCCAGATATTGCGATTTATTAACAAATTTGCAGATTAATGGAGGCAAGTGTGCAGGAGATCTCCAGCGATGTACAATTATAGCCGTGCGCCAGGATTCTACGCAGAGAAGGAAGTGTCGCTAGGTCGTGGATCATTGAAGGTATTCATCAAGATCATGAAGAAGGAAGTGTAGTCTGTCG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

129

Start:

6521493  

End:

6521621

Strand:

-

>scaffold_1_SINE-tRNA_34

GGTCTCGGGCGCCAGAGCAAATCCGCATGTAAATTCTCTGATTGCCACTAGTATATAGCAAGGGGGAATCGAATCCGGGCGTATTGGGATTACCCCTCAACCACGAAACCCGTCCTACCACTAGCCCAC

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

6593501  

End:

6593663

Strand:

-

>scaffold_1_SINE-tRNA_35

TTTTTTTTTTTTTGAATAACCGCGGGTCTTTCAAAAACTTCCTAGGCCCAAGGACTAAGGCCCAAAGATTCCCCTATGTAAACCTGCCAGTGGCCGTGCCTCGAACCCTGGTGGCGGAAGTCACAGCTGTGACCCCTTTACCACTAGGCCACAAGGCCCGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

157

Start:

6599854  

End:

6600010

Strand:

+

>scaffold_1_SINE-tRNA_36

GGCCTAGTGGTAAAGGGGTCACAGCTGTGACTTCCGCCACCAGGGTTCGAGGCACGGCTACTGGCAGATTTACATAGGAGAATTGCCAGCCTCGTGAGATTAGTCCTTGGGCCTAGGAAACCTTTGGGAGACCCGCGGTTATTCAAAAAAAAAAAAA

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

170

Start:

7049459  

End:

7049628

Strand:

-

>scaffold_1_SINE-tRNA_37

TTTTTTTTTTTTTTAATAACCACGGATCTTCCAAAGGCTTCCTAGGCCCAAAGACTAATCCTACGAGACTGGCAATTCCCCTATGTAAACCTGTCAGTGGCCGTGCCTCGAACCCTGGTGGCAGAAGTCACAATTGTGACCCCTTTACCACTAGGCCACAAGGCCCGGTT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

345

Start:

7090845  

End:

7091189

Strand:

+

>scaffold_1_SINE-tRNA_38

GTAGAAGTCCTTGTCCATTGGTTGACCAAGAGTTCATTAATGTTTCTACACCTAGAGGTCTGGGGTTCGAATCCCAGATACTGCGATTTATTAATAAATTTGCAGATTATTGGAGGCAAATGTGCATGAGATCTCCAGCGATGTACAATTATAGTCGTTCGCCAGGATTCTACACAGACAAGAAAGTGTCCATAAAAAACCATAAAGAAAGAGTTGAGCATGAAGAAGGAGGTGAAGGGGGTGAAAGAAGTCATG

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

174

Start:

7871840  

End:

7872013

Strand:

-

>scaffold_1_SINE-tRNA_39

TTTATTTTTTAATAATTTTTTTTTTGAATACGAGGAGGTTCTGGGTCAAAGCTCGTAATCTCCCTAAGCCCGAAATCACAACATGTAATATTAGATTCGTCCCAAGCATCATTCGAACTGACGACCTCTAAACTTCGCTTAAGATCTTTATCTGTTGAGCTAATGATACTTGAT

Arabidopsis lyrata (v2.1)

ID:

scaffold_1_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

336

Start:

7981173  

End:

7981508

Strand:

+

>scaffold_1_SINE-tRNA_40

CCCTTAGCCCATTGGTTGACCAAGAGTTAATTAATGCTTCTACACCAAAAGGTCTGGGGTTCGAGTCTCAGATATTGCGATTTATTAATAAATTTGCAGATTAAAGGAGGCAAGTGTGCATGAGATCTCCAGCGAAGTACAATTATAGCCGTTCGCCAGGATTCTACGTCGAAAGAGAAGTGTCGTTAGGTCATAGATCATTGAAGGTATCTGTCAAGAGCATGGAGAAGGAAGTGTCGTCTGTCGTAGATCTAA