ID:

scaffold_4_LTR-Caulimovirus_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6297

Start:

18953649  

End:

18959945

Strand:

-

>scaffold_4_LTR-Caulimovirus_41

AAGCTATTATGAAATTTTATGATATTTCAAGTTATGGAATCTTACAAGGGGTACACACTTATTTATAGGAGGTTTTTAAGGCGCTGACATAAGCGCTTACCTCAGCGATACATCATCGCTTACATCATTGCTTACATAATCATTACATCAGCGATTACATCATCGCGTGACATCATTATTTATTTTACATGATTTTTAACATATTATTATATTTTATATTTAACATACCGCTTAATGATCCATTTCGAACTCCAG

ID:

scaffold_4_LTR-Caulimovirus_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

660

Start:

18959946  

End:

18960605

Strand:

-

>scaffold_4_LTR-Caulimovirus_42

CTGATCAGATCACGAACACCTTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAAGGATTAACCAACGGGAGAGTTGTTTCCGGTAATTGATCTCCGGGAACGTATTCAATCTCATACAAGGAATTTATCTTAGAAAGGGAATTATTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATAGAAGGATTTGGCTGAGGGTGTTTAGGAGGCTTAGAAAGAGACATGATTGAGAGT

ID:

scaffold_5_LTR-Caulimovirus_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5941

Start:

5027586  

End:

5033526

Strand:

-

>scaffold_5_LTR-Caulimovirus_43

GAACTTCTCTTCGATATCTTCAACATTTACTTCATCATCTGGGGATTGAGCGTCTTTGAAGTAATCGGCACAGTAATCTTGAGAAGTCACCTGGGGAGTTGTCTCTTCTTGTTTATCTTCTTTTGGACTGCTTGGTCTTCCTTTGTTGAACTTCATCATGTAATACTGTAAGTCTTCATCAAGTTGCATTTGATAGTCGACCGGATAATAAACCCAGTTGGGTATGAACGGAATGGGGAACGTTTGTCTTGCATT

ID:

scaffold_5_LTR-Caulimovirus_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1091

Start:

5033527  

End:

5034617

Strand:

-

>scaffold_5_LTR-Caulimovirus_44

CTGATCAAATCACGAACACCTTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAAGGATTAACCAACGGGAGAGTTGTTTCTGGCAATTGATCTCTGGGAACGTATTCAATTTCATACAAGGAATTTATTTTAGAAAGGGAATTATTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATAGAAGGATTTAGCTGAGGGTTTTTAGGAGGCTTAGAAAGAGACATGATTGAGAGT

ID:

scaffold_5_LTR-Caulimovirus_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

96

Start:

5202865  

End:

5202960

Strand:

+

>scaffold_5_LTR-Caulimovirus_45

TCGCCAGATAATAAGCAATATTAAGTCTTTATGATTTTAAAATTGAATATATTAGAAGAATTTTAAACTCTGTTCCAAATTTCTTGACTCGAGAAT

ID:

scaffold_5_LTR-Caulimovirus_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

175

Start:

10128949  

End:

10129123

Strand:

-

>scaffold_5_LTR-Caulimovirus_46

CCATAGTCGTGTGGGGATTGGATACGTAGTATTTTGGAAGTAGAGTAGGCTATTTGAGTAGGTTCAGATTTGTTTGGATAATGAGTAATCTCAGCAGACTTAGAGTCTACTAGAATGTACTCATAAAAAGTACGGTTTTTGGTTATGTTATCGGTTTTATATTGACAATCTTCAT

ID:

scaffold_5_LTR-Caulimovirus_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

251

Start:

10129122  

End:

10129372

Strand:

-

>scaffold_5_LTR-Caulimovirus_47

ATTTAAATAGTAGCTTAGTGCCTACTACTTTAGTTGTTACCCCTAATTCGGATACTTTAAAAGGATAAATTTGTGTAAAGAAGGGAGTTCCTAAAATTATTTCTTGGGATAAATTCTTTACTAATATAAATTGATTTGTAAAACAGTATCCTTCATTACAAACTTTTGCACAGGGTAATTTGTATTGTACTTTTAAGTTAGTGCCATTGGCTCCACTTAGTTTTTCAGTAGTTTTTTCATAGTATTTTGTT

ID:

scaffold_5_LTR-Caulimovirus_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

102

Start:

10129354  

End:

10129455

Strand:

-

>scaffold_5_LTR-Caulimovirus_48

TTTTTCATAGTATTTTGTTTAAACTAAATGATTCTTGAGTATCGAATCCGTTTTCTCTAGTTATTATGTCTTTTAATTTTATCAGATATTGCTTTTTAATTT

ID:

scaffold_5_LTR-Caulimovirus_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2421

Start:

10129514  

End:

10131934

Strand:

-

>scaffold_5_LTR-Caulimovirus_49

TATTACATTAATTAATTTACAATTGCATATTCCGTTATAAGTATGATTTGATGATTCTTGTGATTCTGAAGAAGAATCACTTAAATCTTCAATATCATTTATTGTATTATTGCTATCGGTTTCTTCTGTTTTTTCTGATTCGGAGGTTAATAATAATTTGGCTAGTTTATCCTGGATATCGGGCTGATCATGAAATATTTCATTTATTTTTTTCTTCATTTTACAATCCGGGGATCTATGTCCAGGTCTTTTCCA

ID:

scaffold_5_LTR-Caulimovirus_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

845

Start:

10143525  

End:

10144369

Strand:

-

>scaffold_5_LTR-Caulimovirus_50

ATAACCATGCCGTTCATTTTGGAATTTGACTTCTGGTAAATGAACGTTTAGCACTAATGTGTTGAGTATGGTCGGATCATGAAGACTAACTTGAAAATTAGGTGCGCAATTAAAGTAGACTGCCCCATTACATAAATTTGATTGTACTACACCAAGAAGTGAGTCTTCAAATTTTAGAAGGGTTTTATCTCTTAATAACATTAAAATGGGTGAATCAATTCATGTTCTTGATAATGGTTTTATTGCTATTTGAAC

ID:

scaffold_5_LTR-Caulimovirus_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

142

Start:

10145747  

End:

10145888

Strand:

-

>scaffold_5_LTR-Caulimovirus_51

GAGGACCGCCGTAGGGGTCGTCATCTTGTATAGTAGCATCGGTGTTGGATTCTTCGATTTGTTGGAGGAATGCGTCGAACATTTTTTGAAGCTCCTCCTTCTTGGATGATTTTGATGATGTTGTGGAGTGTGCTGGACTAGA

ID:

scaffold_5_LTR-Caulimovirus_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

85

Start:

18167463  

End:

18167547

Strand:

-

>scaffold_5_LTR-Caulimovirus_52

CGATATTCTCCAAGCGAATTCCACCATTCTTTTAATGCGCCTGAAAGTCTCGATGTGAATTGTTGTATCACCATTTCTGTTGGGG

ID:

scaffold_6_LTR-Caulimovirus_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1319

Start:

11577485  

End:

11578803

Strand:

-

>scaffold_6_LTR-Caulimovirus_53

TCGAACTTCCATTGTGAAAACCAGCTTGCCCACCTGAGTAGTTGTGCTTGCGGTAGGACCTTCTGCTTGAATTGGATCATTTTAGGAAATGATGACATGTCCATTTCGATGAGGAAATGCTGGCCCACCAAGTGAAACTCGAACTTTTCTATCCCTCTTTTTATTGCAAGTATCTCCTTGTAGGTTGAATGGTAGTGCTTTTCACTGTCCTTGAAAACTCTGCTTTTGTAACCACAGATATGTCTTTTCCCTTTC

ID:

scaffold_6_LTR-Caulimovirus_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

758

Start:

11579412  

End:

11580169

Strand:

-

>scaffold_6_LTR-Caulimovirus_54

ATCGTCAAGAGAGAAAATGGATTCAATGTCGGAGTCATCGATATCTTCGATTTGGGCCAAGTATCCGAGTAGATTGTCTCTTTTCTTCTTGTTTGGGTATTGTTTTGCATAATGACCTTTCTTCTTGCAGATGTAACATCTATCTGATTTCTTGAAACCTCTTTGTGACTTTTTCCTGAAGAACTTCCACTTCTTTCTTCTTGACAGTTGAGAATATTTTTTCTACCATTTCTTCTTGAATCTTCTATCTTTTCC

ID:

scaffold_6_LTR-Caulimovirus_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

486

Start:

11581706  

End:

11582191

Strand:

-

>scaffold_6_LTR-Caulimovirus_55

ATGGAGTTTCTCATAGTTGGTCACCCATGATTTAGGAAGTAATTTGCCCAGTTCTTCTCTAGGGATTTGTCTTGGAATATGGATGCATGAAGGGCTGTGGTGTGATTCCAGCTGAATGAGCAAAGCATCCTCTGTATCTCTAGGAAGGCTAAGATCCATAGCATGGTTTTGGACTCGGTACGCCATTTGATGGTGGAGTGTTGCCGCATAAGTATTTCCGACTTGTTGAGCACCTGTGATTTGGAGCTAGATCTG

ID:

scaffold_6_LTR-Caulimovirus_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

137

Start:

11617475  

End:

11617611

Strand:

+

>scaffold_6_LTR-Caulimovirus_56

TTCCGTTCATACCCAACTGGGTTCATTATCCGGTCGACTATCAGATGCAACTTGATGAAGATTTACAGTATTACATGGTGAAGTTCAACAAAGGAAGACCAAGCAGTTCAGAAGAAGATAAACAAGACAGATATCTC

ID:

scaffold_6_LTR-Caulimovirus_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3614

Start:

11617597  

End:

11621210

Strand:

+

>scaffold_6_LTR-Caulimovirus_57

CAAGACAGATATCTCGAGAAGAATTGCTACGAAAACTGCCAGAGTCATGGGTAACAAGCTATGAGAAGATACATCAAGCATCTCAAGCACCGATCCAGTCATCTGACGTAAGCTTTCACTCTAGAAGCGATGGAACCACTGAGATAAAGTTCGAAAAGCCTAGATCGTCTTTTCAAAAGAAACTCTTTACTCAATTCACTATCCAAATTGAGGAGCAAGAGTTCTATGATCCCGTCAAAAAGAAAGATCTTCAAC

ID:

scaffold_6_LTR-Caulimovirus_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1319

Start:

12639951  

End:

12641269

Strand:

-

>scaffold_6_LTR-Caulimovirus_58

TCGAACTTCCATTGTGAAAACCAGCTTGCCCACCTTAGTAGTTGTGCTTGTGGTAGGACCTTCTGCTTGAATTGTATCATCTTAGGAAATGATGACATGTCCATCTCGATGAGGAAATGCTGGCCCACCAAGTGAAACTCGAACTTTTCTCTCCCTCTTTTTACTGCAAGTATCTCCTTGTAGGTTGAATGGTAGTGCTTTTCACTGTCCTTGAAAACTCCGCTTTTGTAACCACAAATATGTCTTTTCCCTTTC

ID:

scaffold_6_LTR-Caulimovirus_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

487

Start:

12641783  

End:

12642269

Strand:

-

>scaffold_6_LTR-Caulimovirus_59

ATCTCCGTCTTCTTCTTCTTCAGTGCTTGATCCATCTGAAGAGTCTTCATCTTGTTCTATACCCATAGCTAGAATTATGTTGTCTTATGGTTCATCGTCAAGAGAGAAAATGGATTCAATGTCGGAGTCATCGATATCTTCGATTTGGGCCAAGTATCCGAGTAGATTATCTCTTTTCTTCTTGTTTGGGCATTGTTTTGCGTAATGACCTTTCTTCTTGTAGATGTAACATCTATCTGATTTCTTGAAACCTCT

ID:

scaffold_6_LTR-Caulimovirus_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

317

Start:

12644178  

End:

12644494

Strand:

-

>scaffold_6_LTR-Caulimovirus_60

ATGGAGTTTCTCATAGTTCGTCACCCATGATTTAGGAAGTAACTTGACCAGTTCTTCTCTAGGGATTTTTCTTGGAATATGTATGCATGAAGGGCTATGTTGTGATTCCAGCTGAATGAGCAGAGCATCCTCTGTATCTCTAGAAAGGCTAAGATCCATAGCATGGTTTTGGACTCGGTACGCCATCTGATGGTGGAGTGTCGCCGCATAAGTATTTCCGACTTGTGGAGCACCTGTGATTTGGAGTTGGATCTG