ID:

scaffold_3_LTR-Caulimovirus_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6522

Start:

8403046  

End:

8409567

Strand:

+

>scaffold_3_LTR-Caulimovirus_21

GCCATCTTCCAGCCGACGAGTATTGGAGTATGTGCAATCCAGCAAGTTTTCATCATGTCAAGTTCCAGCTACTGAAGAAGAACAATTCATCTCGCTAAATATTCCAGAGCATCTTCCAAGGCTATGGCAGCAGCAGGGCTACACTCACCTACACTTTGGTGTAGTACGAATCGGTTTAACCTTACACGCACGAAAAGGTTTACCGGTTGTAGCACGGATTGCTTTGCTTGACTCAAGACTCAAATCATATCAACA

ID:

scaffold_3_LTR-Caulimovirus_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

5116

Start:

8409562  

End:

8414677

Strand:

+

>scaffold_3_LTR-Caulimovirus_22

AGAAGCGAGTTAATCTGTATAATCCTTTTGACTACATGTCATCTGGATTACCCACATATCAAGAATCATATTCTCCAGGATTTCTGTTTGGATATCAAGATCCAAAACCAAAACAGCCTGTACCTGGATTCTTATCCTCGGATGAAGCCTTTACATCTCGGTTTGGTACAACTTCAATCAGCAATTTCAAAACAAAGGTGGCAAGAACTAAACCAAGGCGTACCAAAGATTCGGAGTTTCACATCAATCCATCCA

ID:

scaffold_3_LTR-Caulimovirus_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6633

Start:

10303644  

End:

10310276

Strand:

-

>scaffold_3_LTR-Caulimovirus_23

GATACCATAATCTTAAAGCTAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGGTTCGGGCCTCTTTGCCTACTGTGTTGCTCAACCTACTATTAGGAACTGTGAACCCCGGCGAGTACTATTGACTGCCGTGTTCGACCGTCGTATTGACGGACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTGTTTAG

ID:

scaffold_3_LTR-Caulimovirus_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

348

Start:

10310278  

End:

10310625

Strand:

-

>scaffold_3_LTR-Caulimovirus_24

TGATCAGATCACGAACACCTTTTACCGAAAAAGCACTAGGCTTTTTAGCAAAGTATTCATAAGGATTAACCAACGGGAGAGTTGTTTCCGGTAATTGATCTCCGGGAACGTATTCAATCTCATACAAGGAATTTATCTTAGAAAGGGAATTATTTCTTTGGATTTTTGGTAAAGTAGATATAGCAAATTGAGAATCTATTGAAGGATTTAGCTGAGGGTGTTTAGGAGGCTTAGAAAGAGACATGATTGAGAGTT

ID:

scaffold_3_LTR-Caulimovirus_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2347

Start:

17945007  

End:

17947353

Strand:

-

>scaffold_3_LTR-Caulimovirus_25

AAGAAGAGGTATCGTTGTTTGATACACCTGTTGTTGTCGATATTCTCCAAGTGAATTCCACTATTCTTTTAATGCGCCTGAAAGTCTTGATGTGAATTGTTGTATCACCACATCTGTTGGGGATGTGATTGCTTCTGAGGTCATCCACGCATGAAATTCGTCAAGACGACTATTCCATTTTTCAAAAGGAATGTCATCAAATGTGAATACCATTATCTTTGATGCAAATTGCTTCTTTGGTACACCTTGCGTTTC

ID:

scaffold_3_LTR-Caulimovirus_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

830

Start:

17947356  

End:

17948185

Strand:

-

>scaffold_3_LTR-Caulimovirus_26

TGATGAGCTCACGAACACCTTTTACTGAAAAAGCACTAGGCTTTTTAGCAAAGTACTCATAAGGATTAACCAACGGGAGGGTTGTTTCCGGCAATTGATCTCCGGAAACATATTCAATTTCATACAAGGAATTTATTTTAGAAAGGGAATTATTTTTTTGGTTTTTTGGTAAAGTAGAGATAGCAAATTGAGAATCTATTGAAGGATTTAACTGAAGAGGTTTTGAAGGCTTTGAAAGAGACATGATTGAGGGTT

ID:

scaffold_3_LTR-Caulimovirus_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2849

Start:

17948203  

End:

17951051

Strand:

+

>scaffold_3_LTR-Caulimovirus_27

CCCTTTGGTCTCAAGACGGCGCCATCACTATTTCAACAAGCAGTGTTACATATATTCAAGCCATTGTTACACACAGCTCTTATATACATTGACGACATACTCATATCCTCAAAAAATGAAGAAGAGTATATTCAGGCGCTATAACAGTTTCAAGACATTGTCAAGAAGAACGGAATCATGCTATCAGCCAGAAAGATAATAATAGCCCAGCCCAACATTGATTTTCTTGGTATGCATATCAAAGAAGGAAGTTTC

ID:

scaffold_3_LTR-Caulimovirus_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

749

Start:

17951054  

End:

17951802

Strand:

+

>scaffold_3_LTR-Caulimovirus_28

CCATCTGCCAGCCGACGAGTTTTAGAGTACTTACAATCCAGCAAGTTTTCATCATGTCAAGTTCCAGCCACCGAAGAAGAACAATTCATCTCGCTAAATATTCTGGAGCATCTACCAAGGCTATGGCAGCAATAGGGCTATACTCATATGCACTTTGGTGTAGTAAGAATTGGTTTAACCTTACATGCACGAAAAGGCTTACCGGTTGTAGCACGGATAGCTTTGCTTGACTCAAGGCTCAAATCCTATCAACAA

ID:

scaffold_3_LTR-Caulimovirus_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2872

Start:

17951814  

End:

17954685

Strand:

-

>scaffold_3_LTR-Caulimovirus_29

CAAAAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACGAGTCGTATTGACAAGCTAGGGTTCATATTCCAGGTAAAGAGAGCGGTTCGGGCCTCATTGCTATCTGTGTTGCTCAACCTACTATTAGGAACTTTGAACCCCGGCGAGTACTATTGACTGTCGTGTTCGACTGTCGTATTTACGGACCACTTATGCTAACCTTAAGAAAAGATACAGAATCGCGACTGTGTTTAGAATAGAAAGAAACAAGGTTTAT

ID:

scaffold_3_LTR-Caulimovirus_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

157

Start:

17954681  

End:

17954837

Strand:

-

>scaffold_3_LTR-Caulimovirus_30

TGCTGGATTTGTCCGATCGAGATTTCTTCGATTGTCTGTCCTTGATCTCTGATATACAGCTTCGTTTGTTGACCTAGGTAATCATCTATTGATCAGAGATATACTTGCTTCAGGCTTGGATTATTTAGACCATTGAGAGCATAATACCTTCGAGTTT

ID:

scaffold_3_LTR-Caulimovirus_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3683

Start:

17990073  

End:

17993755

Strand:

+

>scaffold_3_LTR-Caulimovirus_31

ATATTTAACGAAAAATAGCATGTATAAGCAATAAGAAAGATTTATGGTATCAGTCGCTAAAACGATCGATTTTCAGTTTTCAAAAATAAAGATTTCATTTTAAATTTTAAAATCAACTTTTAGAAAGAAACGGACCTCTTCTACCGAGACATTGAAGCCAAAGGTGTTCCAGGCAGCAAGTCCTCAGAAGGAAGGCAGTAAGACCGTTGGTAAACCGCAGCCGTGTCAAAGTAAAACAGGTTAGTCTCTTGCTAA

ID:

scaffold_3_LTR-Caulimovirus_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3236

Start:

17994907  

End:

17998142

Strand:

+

>scaffold_3_LTR-Caulimovirus_32

ATATAATTACACATAGGATATGATTTCCAAATAGAAATAATAGCCTTAATGGATTCTGGTGCTGATTACAACTGTATCCGTGAAGGAATAATACCAACAAAATACTATGAAAAAACTACTGAAAAACTAAGTGGAGCCAATGGCACTAACTTAAAAGTACAATACAAATTACCCTGTGCAAAAGTTTGTAATGAAGGATACTGTTTTACAAATCAATTTATATTAGTAAAGAATTTATCCCAAGAAATAATTTTA

ID:

scaffold_4_LTR-Caulimovirus_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

243

Start:

1686165  

End:

1686407

Strand:

+

>scaffold_4_LTR-Caulimovirus_33

TCTGTATCTTTTCTTAAGGTTAGCATAAGTGGTCCGTCAATACGACGGTCGAACACGGCAGTCAATAGTACTCGCCAAGGTTCACAGTTCCTAATAGTAGGTTGAGCAACACAGATGGCAATGAGGCCCGAACCGCTCCCTTTACCTGGAATATGAACCCTTGCTTGTCGATACGACTCGTCGTCTAGACTTAATCAACACGACCCTCCGTTCGTGCTAGCTTTAAGATTATGGTATCAGAGC

ID:

scaffold_4_LTR-Caulimovirus_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

229

Start:

5565877  

End:

5566105

Strand:

+

>scaffold_4_LTR-Caulimovirus_34

AAAAGTATATTTTCAAAATTTGATATGAAAAGTTGGTTTTGGCAAATACAAATTGCCGAAAAGGATAAATACACGACATCATTCACAGTACCTTTTGGGCATTACGAATGGAATATCATGCCTTTCGGTTTAAAAAATGTACCTTCTAAATTCCAAAATATAATGAACGAAATATTTAACCCTTACTCCATCTTCTCTATAGTCTATATAGATGATGTGTTAATATATT

ID:

scaffold_4_LTR-Caulimovirus_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

622

Start:

5576971  

End:

5577592

Strand:

-

>scaffold_4_LTR-Caulimovirus_35

GAACATCGATCCATGTTGTATTTGTCCCACCATTTGATTCGGTGTCCTCGGACCAATGAATATGGCATACCTGGTAGGAATGGGATGAGGTTGTAGTGCCAAGATAGTATCCATGATATTCCCATGTCAATATGGAAAGCTATCTTTGGTAAAGAGCCAATGGGTTGGTGTTTTTCGTGTTTGGTGTAGTAGGGTAATGAAAGTTTATGTATTTGAGAAGGATAGATTTCATCGAACGGGCCAAATCAGTACCAC

ID:

scaffold_4_LTR-Caulimovirus_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

623

Start:

5580556  

End:

5581178

Strand:

-

>scaffold_4_LTR-Caulimovirus_36

TAGTATATTGTATATCAAAATAAAAAACAGATAAAATAGCTTGCCATCTAGCGAATATTTGTTTAGGAATTAAATTCTTAACATCCTTTTTAAAATCTCTTTGGCTGATTTACAGTCTACAGGTAATAAAAACTTTTTGTTTGTTAAATCATCTTGAATTTTAGAAATATAGTTTACAATAGATAAAACTTCTTTTTCACTGTAGAATAGTTCTTTTGGGGTTCTAGCCAAACCCCTGAATGAAAACGGACTATA

ID:

scaffold_4_LTR-Caulimovirus_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

233

Start:

9749045  

End:

9749277

Strand:

+

>scaffold_4_LTR-Caulimovirus_37

CGATTCTGTATTGTTCTCTTAAGGTTAGCATAAGTGGTCCGTCAATACGACGGTCGAACACGGCAGTCAATAGTACTCGCCGGGGTTTCACAGTTCCTAACAGTGGGTTGAGCAACACAGAGGCAAAGAGGCCCGAATCGCTCCCTTTACCTGGAATATGAACCCTTGCTTGTAAACACGACTGTCGTCTAGACTTAGTCAACACGACCCTCCGCTCGTGATAGCTTTAAGAT

ID:

scaffold_4_LTR-Caulimovirus_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

6067

Start:

14284269  

End:

14290335

Strand:

-

>scaffold_4_LTR-Caulimovirus_38

AGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGCACGACGAGTCGTGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGGTTCGGGCCTCATTGCCATCTGTATTGCTCAACCTACTATTAGGAACTGTGAACCCCGGCGAGTACTATTGACTGCCGTGTTCGACCGTCGTATTGACGGACCACTTATGCTAACCTTAAGAGAACAATACAGAATCGCGACTGTGGTTAGAATAGAAAGAAACAAGGT

ID:

scaffold_4_LTR-Caulimovirus_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2842

Start:

14296829  

End:

14299670

Strand:

+

>scaffold_4_LTR-Caulimovirus_39

TATCATCTCAAGAACAAATTCTCCATGGGCATGCAAAGCGTTCTACGTCAATAATCGTGCAGAACAAGCAAGAGGAAAACTCAGATTAGTTATTGACTACAAGCCGTTGAACCAATATCTGCAAGACGTCAAGTTTCCACTACCAAATAAAAGAGCGCTTCTCCAACATCTCCAAGGTGCAAAAATATTTTCGAAGTTTGATCTGAAGTCAGGATTTTGGCAACTCGGCGTCCATCCTGAAGAAAGATACAAAAC

ID:

scaffold_4_LTR-Caulimovirus_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

184

Start:

18953162  

End:

18953345

Strand:

-

>scaffold_4_LTR-Caulimovirus_40

GGCTCTGATACCATAATCTTAAAGCTAGCACGAGCGGAGGGTCGTGTTGACTAAGTCTAGACGACAGTCGTGTTTACAAGCAAGGGTTCATATTCCAGGTAAAGGGAGCGATTCGGGCCTCTTTGCCTCTGTGTTGCTCAACCCACTATTAGGAACTGTGAAACCCCGGCGAGTACTATTGACT