ID:

Thla_scaffold14_LTR-Caulimovirus_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2918

Start:

1135308  

End:

1138225

Strand:

+

>Thla_scaffold14_LTR-Caulimovirus_21

AAGAATATATTCAAATAATAAACAAAATAAACTATCAAATATGGTATACAAAAATTACATTGCACATAGGATACAATTATAAACTAGATATAATTGCACTACTCGATACAGGAGCAGATTATAACTGTATTAAAGAAGGAATAGTCCCAACTATGTATTATGAAAAAACATATGAAAAACTTAGTAGTGCAAACGGAAGTAGTTTGAACGTTAATTATAAAATCCAAAAAGCAAAAATCTGTAATAAAAACTATTGTTTTAAAACACAATTTATCCTTGTTAAAAATTTAAGTCAAGAAATTATATTAGGAACACCATTTTTTACACAAATCTATCCTTTTAAAGTTACACAATCGGGAATAACCACCAAAATTGTAGGTGAAATGATAGTATTTGAATTTTTATTTCCCATGAAAACTAAAGAAATCTTAGCTTTACAAAACTCTACAATAGAAAAATCTATAAACATAATAAATGGAAAACAAAAACATATTCAATACTTACAACAAGAAATAAAATATAAAAATATTAAACAGCAATTACATGACTCATTAATAATAAATAGAGTTAAAAAAATAGAAAATGAATTACTAGATCAAGTATGTTCTGACCTCCCAAATGCATTTTGGCAAAGAGAAAAACATATTGTTGAAATTCCCTATGAAAAAAATTTTAATGAAAAAAATATACCAACTAAAGCTAGACCAATTCAAATAAATCAAACACTTTTAGAATAATGTAAAAAAGAAATACATGAACTATTAGACAAAAATTAATACGAAAATCTAAGTCACCATGGAGTTGTTCTGCTTTTTATGTCAACAATCAAGCAGAAAAAGAAAGAGGAGTACCTCGCCTAGTAATTAATTATAAACCTTTAAACAATGTTTTATAATGGATAAGATACCCTATACCAAATAAAAGAGATTTATTAAAAAGATTATATGATGTTTGTATCTTTTCAAAATTTGATATGAAAAGTGGATTTTGGCAAATACAAATAGCCGAAAAGGATAAATATAAAACTGCATTTACTGTACCTTTTGGGCACTATGAATGGAATGTTATGTCATTCGGTTTAAAAAATGCACCCTCAGAATTTTAAAATATTATGAATGAAATATTTAACCCTTACTCTACTTTTTCAATAGTATACATAGATGATGTTTTAATATTTTAAAAATCTATTGATCAACATTTTAAACATTTATATACTTTTTTAAGTGTTGTAAAAAAACATGAACTAGTAGTATCAGCAAAAAAGATGCAAATATTTCAAACAAAGATAAGATTTTTAGGACATAATATATATCAAGGAACTATGACACCTATATCCAGGTCTATAGAATTTACAAATAAATTTTCTGATGAAATAAAAGAAAAAACTCAACTACAACGATTTCTAGGATGTTTAAACTACATATCAGATTTTTTACCTAATATACAAAAACTTATTCAACCATTGTTTCAGAGATTGCAGAAGAATCTAGTCCTGTAGTCTAGTTTGCATACTAGTATAGTCCAAGATATTAAAAAGAAAGTTATAACCTTACCATGCTTAGTCATTCCACATCCAAGTGCATTTATGATAGTAGAAACCGATGCATCAGAAATAGTTTATGGGGGAATCCTTAAACAAAAAATGCCAGAGTCAACCCATGATTCAATAGTTCGGTTTCATTCTGGAGTATGGCTTGACCCCCAAAAGAATTATTCTACAGTTAAAAAAGAAGTTTTATTTATCGTAAATTGTATTTCTAAATTTCAAGATGATTTAAGAAACAAAAAGTTTTTATTACGTGTTGATTGCAAATCTGCAAAAGAGATTTTACAAAAAGATGTTAAAAATATAGTTTCTAAACAATTTTTTGCAAAATGACAAGCTATTTTATTTGTCATTGATTTTGATATACAATATATAAAAGGTAAAAATAATTGTTTACCCGAATTTCTAACAAGAGAGTATTTACAGGGAAAATCTCAAGACCTCCAAAATGAGTGAACAAAAAAGGCTCATGTCTGCAGCAGACTACATCAAGAATCAATCACATCTACAAGGAAAACAAATCACCACCAGTAATCAATTCTCTGCATTGGCAGAATTTCCACCTCTGTCTTATGCAAAATCCGTCAACCCATTACCTTAAAAAACAGCCACCCCTTCCTCTCCACAAAAAACTACTGACCAAAAATCCTCATATGTCCTTAAACAACACCGCCAACACCTCACTACTACATCATTCACCAAACCAATATCACTAAAAGACCTTACCCACTTTACCAACCGTATATTTTACGAGGATAGCCAATACCTCACCGACAACCTTACAAAAAACCGAACCTTTTATGAATTTATCCTCGTCGATACCAAGTTAGTTGAAATAACCCACCATACAGATAAAACCAACTCTGACCTTATATCCTATTCCACATGTAAAATCCTCAGGATATGCAATCCTCAAGACCTTGGCCTCTTTAACTTCCATACCAGAAAAGACTTTTCTATTCCCGGGTACCATATTTCAGGGTTTACTTACGTAGATTACCAAAAAGCTTTCCTTCATATCCTTTACCTACGTACCTATGACCATTCATGGTTTATCTCTTTTGACTTTCACTGACCCAAATCAATACCCGGATGGTTCTATGAATGGTGGCACTGGTTTGGACCATATGACCAAATTTATCCTCCACAACTACTCAAAGTATCCATACCCTACTACACTAAACACGAAAAACATGAACCCATTGGACCTTTACCAAAAATATCCTTCCACATTGGACATGGGAGTACCTTGGATCCTATCATGGTACTTTAACCTCATACCTTTTCTACCTGACATGCCGTACTCTTTAGTCCGGGAATACCGAGTCAAATGGTGGGACAAATACAACTTGGATCGCTGTTCTGTCACCAA

ID:

Thla_scaffold14_LTR-Caulimovirus_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

243

Start:

4639094  

End:

4639336

Strand:

-

>Thla_scaffold14_LTR-Caulimovirus_22

TTTTTAGCAAAGTATTCGTATAGAGTAGTTTAAAGTAATTGATTTTGCGGAACATATTCGATTTCATATAAGATTAGGAGAACGATTTTTGATTTTTAGTAAAGTAAAAACTGAAAAAAAGAATCTATGGTTAAAAGATTGAAAATAGATATAGTGAAAAAGTGTTTTTCAGAACATTCAAAATTATTAATCATAAACAATAATTTTTTTTTCTGTCAATTCGAAAGTACTATGGCTCTGATA

ID:

Thla_scaffold140_LTR-Caulimovirus_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1060

Start:

594198  

End:

595257

Strand:

+

>Thla_scaffold140_LTR-Caulimovirus_23

TGTAGGCGGTATGTATGAATGGAATATCGACGGTAGATCAGAATATGAAATGATGAATTTATTTCAAGAAATGGGAATTGCTGGTTTGGCGTATAAAGGTAAAGGCTTATCAGACAAATAAGCATGTGTCCTTTTAGTTTCAGGATTTAATGGAGCATTAAAATATTGGTGGAATAATGCTTTAGATACTATAGCTCAAGATAATATAATAAATCATACTGAAACTAGAAGAGTAGAAGGTGACGATGGATTATATGAAGAAGAATAAATTCAAAATGCTATAAAAGTACTACTACATACTATGACTATGCACTTTGTAGGAAATCCCTCAGAAGAACTAACTAGTAAAAAACTTGTCCTAACAAACCTTAGATGTCCAACTTTAAGAGACTTTAAGTGGTATAAAGATATTTTTATAACTAATATATTTCAAAGAAATGATTGTAATCAATCTTTCTGGAAAGAAAGGTTTATAGCAGGATTACCTTCTTTCTTTGCAGAAAGATTAATAAGTAAATTAAAAAAAAATTCAGGAGGACAACCAATACCATGGGATTCAATAACCTATGGTCAATTGTTTGCCTTCGTTAAAAAAAAGGATTACAAATTTGTCAAGAACATAAAGATAAACAACAAACCAATAAATTTAAATTCGGAGAAACTATGGGTTCATTCAGTGAACAATATGGTTACCACCGTCTAACCCCACCATCTAGAGAAAGACGCAAAATTTACAAACAAAGTAGATTTTCACATCCACGTCCATATAGTAAAAACAAAAACTTTTCCAAAATATTTTCTAACCCTTATTATACAAAAAACAGAATACCAAAAAATTCAACTAAAAAGGAAAAAAATTATATGTTGGAACTGTAAAAGACCAGGACATAAATCAACCGAATGCAAAATGAAAAAGAAAATTAATGAAATTTTCCACGATAACCAAGACATTAGAGAAAAATTAGAAAAAACTACTTCTTTCAGAAACAGAAGATTCAGAAAAATTTAGTAGTGAACCATCCTTATATATTATAGAAGATCAAAGCGAATCATCATCTGA

ID:

Thla_scaffold140_LTR-Caulimovirus_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

214

Start:

595383  

End:

595596

Strand:

+

>Thla_scaffold140_LTR-Caulimovirus_24

TAAAACTAAAGGATATAGTACATAAAGAAAATAAGTTATATACTCCAGAACTATTTAGCCTTAATAAAATACTTGAAAAATATTCTTCTCCAACATTATTTAAACAAGTAACTACTGGAGAATTACAAGGAGAAGTTAAAAATTTAAAATCTCAAGTAAAAGAACTACAACATATAGTTCATCAACAACAATTAGAACAATTACAGATGAATGC

ID:

Thla_scaffold140_LTR-Caulimovirus_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2643

Start:

595701  

End:

598343

Strand:

+

>Thla_scaffold140_LTR-Caulimovirus_25

AAGAATATATTCAAATAATAAACAAAATAAACTATCAAAAATGGTATACAAAAATTACATTGCACATAAGATACAATTATAAACTAGATATAATTGCACTACTCGATACAGGAGCAGATTATAACTGTATTAAAGAAGGAATAGTCCCAACCATATATTATGAAAAAACATGTGAAAAACTTAGTAGTGCAAATGGAAGTAGTTTGAACGTTAATTATAAACTCCCAAAAGCAAAAATCTGTAATAAAAACTATTGTTTTAAAACACAATTTATCCTTGTTAAAAATTTAAGTCAAGAAGTTATATATTAGGAACACCCTTTTTTACACAAATCTATCTTTTTAAAATTACACAATCGGGAATAACCACAAAAATTGTAGGTGAAAAGATAGTATTTAGATTTTTATCTCCCATGAAAACTAAAGAAATCTTAGCTTTACAAAACTCTACAATAGAAAAATCTATAAACCTAATTAATGGAAAACAAAAACATATTCAATACTTACAACAAGAAATATAAAAATATTGAACAGCAATTACATGACCCATTAATAATAAAGAGAGTTAAAAAATTAGAAAATGAATTACTAGATCAAGTATGTTCTGACCTCCCAAATGCATTTTGGCAAAGAGAAAAACATATTGTTGAAATTCCCTATGAAAAAGATTTCAATGAAAAATATACCAACTAAAGCTAGAACAATTCAAATGAATCAAGAACTTTTAGAATATTGTAAAAAAGAAATACAGGAACTATTGGACAAAAAATTAATATGAAAATCTAAGTCACTATGGAGTTGTTATGCTTTCTATGTCAACAATCAAGCAGAAAAAGAAAGAGGAGTACCTCGCCTAGTAATTAATTATAAACCTTTAAACAATGTTTTACAATGGATAAGATACCCTATACCAAATAAAAGAGATTTATTAAAAAGATTATATGGTGCTTGTATTTTTTCAAAATTTGATATGAAAAGTGGATTTTGGCAAATATAAATAGCCGAAAAGGATAAATATAGAACTGCATTTACTGTACCTTTTGGGCAATATGAATGGAATGTTATGCCATTCGGTTTAAAAAATGCACCCTCAGAATTTCAAAATATTATGAATGAAATATTAAACCCTTACTCTACTTTCTCAATAGTATACATAGATGATGTTTTAATATTTTCAAAATCTATTGATCAACATTTTAAATATTTATATACTTTTTTAAGTGTTGTTAAAAAACATGGACTAGTAGTATCAGCAAAAAAGATGCAAATATTTCAAACAAAGATAAGATTTTTAGGATATAATATATATCAAGGAACTATGACACCTATATCCAGGTCTATAGAATTTACAAATAAATTTCCTGATGAAATAAAAGAAAAAACTCAACTACAACGATTTCTAGGATGTTTAAACTATATATCAGATTTTTTACCTAATATACGAAAACTTATTCAACCATTGTTTCAGAGATTGCATAAGAATCCAGTCCCATGGTCTAGTTTGCATACTAGTATAGTCCAAGATATTAAAAAGAAAGTTATAACCTTACCATGCTTGGTCATTCCACATCCAAGTGCATTTATGATAGTAGAAACCGATGCATCAGAAATAGGTTATGGGAGAATCCTTAAACAAAAAATGCCAGAGTCCACCCATGAGTCAATAGTTTGTTTTCATTCTGGAGTATGGCTTGGCCCCCAAAAGAATTATTCTACAGTTAAAAAAGAAGTTTTATCTATCGTAAACTGTATTTCTAAATTTCAAGATGATTTAATAAACAAAAAGTTTTTATTACGTGTTGATTGCAAATCTGCAAAAGAGATTTTACAAAAAGATGTTAAAAATCTAGTTTCTAAACAAAATTTTTGCAAGATGGCAAGCTATTCTATCTGTCTTTGATTTTGATATACAATATGTAAAAGGTAAAAATAATTGTTTACCCGATTTTCTAACAAGAGAGTATTTACAGGGAAAATCTCAAGATCTCCAAAATGATTGAACAAAAAAGGCCCATGTCTGCAGCATACTACATCAAGAATCAACCACATCTACAAGGAAAACAAATCACCACCAGTAATCAATTCTCTGCACTGGCAGAATTTCCACATCTGTCTTATGCAAAAGCCGTCAACCCATTACCTCAAAAAACAGCCACCCCTTCCTCTCCACAAAAAAACTACTGACCAAAAATCCTCATATGTCCTTAAACAACACCGCCAACACCTCACTACTACATCATTCACCAAACCAATATCACTAAAAGACCTTACCCACTTTACCAACCGTATATTTTACAAGGATAGCCAATACCTCACCGACAACCTTACAAAAAACCGAACCTTTTATGAATTTATCCTCGTCGATACCAAGTCAGTTGAAATAACCCACCATACCGATAAAACCAACACTGACCTTATATCATATTCCACATGTAAAATCCTCAGGATATGCAATCCTCAAGACCTTGGACTCTTTAACTTCCATACCAGAAAAGACTTTTCTATTCTCGGGTACCATATTTCAGGGTTTACTTACGTAGATTACCAAAAAGCCTTCCTTCATACCCTTTACCTACGTACCTATGACCAATCCTGGTTTATCTCTTTTAACTTTCACTGTCCCAAATCAATACCCGAATGGTTC

ID:

Thla_scaffold143_LTR-Caulimovirus_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

3056

Start:

437160  

End:

440215

Strand:

+

>Thla_scaffold143_LTR-Caulimovirus_26

TCCGAACACTCGACAAGCTTCGCAAGCAAAAAAAATTCTGGATGGAATTCATGGACAAATCAAAGCAACTGTCCAAAATATGTGCCAGACCAGACCTATCAATCAAGTGTTCTAAATCCAAAAAGACTTGTTCATATAAACTTCAAAGCAAATCTCGAAAATTTAGAAAACTGTTTCAAGGACGCTTTAACAAGTTCAGACGTAAACGTTTCTTCAGAAAAAAATGAAGCTTTGAAAAGACAATGAGACGCTTTCTATGCCGTAAAGAAGGACATTTCGCAAAAAAATATCCAAATAAGTCAAAGAAGAAGAAACAATATCTCATTAACTCGATATCCAGTATTGCACCAGATATCGACTTCGACAATCACGACCTAGAGTCTGTTCTATTATACGATAGTGACGACAATGATGCTATTTGTGGATACTCAGATTCCGAAGTTTCATCTGAAGAAGAAAAAGAAGATTGTTGCTTTAAAATCACTGAAATTCCACGGCATGATGAGGTTCAACCGCCACACTTGCCCGTCACGATCTTTGACCCATAGAGAAAAGAAGAACCAGTTCATGCTATCGTATTTATAGACATAGGCGCCCATTCATCTATAATGAATCCCAAAGTTCTTCTGTCTTCTATGTGGCTGCCGCACCAATAAGAATTCTGAGTCGCAAACGCTGGCTCGCTATCTGTTAAGCTCAAGCCCAACCAATAACCATAGAAATCTTCCCAGGATGTCAAGTTACAACATAAGTTCTAGGATCTTCTGCGCCGGGCAAAGATCTTATCATGGGATGGGATACATGCTATGCGTTAAAGAAGAGGTTCGATATCTCACTCGAACCACCAGGAATGAAATGGAAGTCTTTCTACAAAGCCTTCACGATAATACCTCGCATATTTTCACTTGAAGAAGCAGCACCTCCCGAGTTCGACAAGATCAAAGAAGAAATCACGATAATCTCTTGTGCAGATTCTCATACAGATTTCCTTCAGAAGAGAAAAAATCCATTGTGGCTAAATTTGGAGTTCTTTGTATCATTACCTTTCAAAGAAGATGTTCACACCACTCCAACAAAGGCGAGTCATGAAGGAATGCCACCTACCTTACTGCAACAGGCAAACGAAGAGTGTGACCAACTGGTCAATCAAGGAATAGTCTCAGCCACAAATTCACTGTGGGCATGCAAAGCAATTTACGTCAACAACATAGCAGAACAAGCGAGTGGGAAGCTCATGATAGTTATTGATTACAAGCCCTTGAACCAATATCTTCAAAATATTAAGTTCCTTCTGCCAAACAAAAAGGCCCTTCTACATCATCTACAAGGAGCAACAATATTTTTGAAGTTCAACCTTAAATCAGGGTTTTGGAAACTTGGAGTTCATCCAGAAGAGAGGTACAAGACAGCATTCTGTCTGCCAAATCGCCATCTTCAGTAGAGTGTTCTGCCTTTTGGATTAAAGACAGCACCGAGGATATTCAAGCCACTAATCGACACAGCTCTAATTTACATCGACGACATTCTCTTTTTTCGTCAAGTACAACGGAGCATATTCAGACTCTCAGAAAATTTCAAAGCATTGTCAAGGAATTCGGAATTATGCTCTCGGCCCGAAAGATGATTATAGCCCAGCCCAACATCGACTTTCTTGGAATGAAGATTAACAACAGACAGATCACGCCTCAGCCTCATCTAGCTACAGCTCTTCTTGATTTTCCAGACGAAAATCTCACAAGACGACAAGTTCAGCAATTCTTTGGGGTAATCAATTATGTAAGTGACTTTATCTCATAACTTTTGCAGTTGAAAAGACCACTCCAAAAGATGCTGACGAAGAATCCACCACAATGGGCAACACGACAAACAGAAGCAGTCAAAAGGCTAAAGATAGAGATACATAAGCTACCACCTTTAAAGATTCCTTCCTCGGGGAAATGTATTCTACAGAGTGATGCGAGTGACAAATATTGGGGAGTCATACAGTTCGAAGAGATAAATGGAAAACGTCAAATCTGTGGATATAAAAGCGGATACTTTAAAGACGCAGAGATGCAATATCACTCCACGTTTAAAGAAATCTTAGCGGTCAAGATGGCGATCGAGAAGTTCGAGTTCCATCTGATTGGACATAAATTTCGCATCGAAATGGATATGTCCTCATTCCCAAAGATGCTACAATTCAAGCAAAATATTGTCCCACACCAGCAGCTATAATGATGGAGCGAATGGTTTTCAAAATATGACTTCGAATCCTTCTATTTAAAGGGCAAGAAAAATAGGCTTGCCGACATGCAAAGCAGAAACCCACCAAAGGAGATTCATCTAATGGCGAGTTCATCTACATCATCAAAGAATTACTACGACTTCGAAGCCAACATGCCTGAAGACACCCATCAGCTAATCAATAGAAACTCTCTACACAAACATCTTCAACATAAAATCTTCCATTATCAGTCAATCATCCTCTCAAACATGGTATCAACTGTCACTACATCGCACCAATGGGGATTCACCCGGACTATCAGTTCACTCACCTCTACAGAATCGAAAATTCGAACATGCCTGAAGAAGTTCTGTGCTTCCTATGATATCTATACTCGGTCTACACCATTGGCATCACATTCGACATAGGTTGGTAATATCAATACATCAATGCCCAGCAAGGTCAGAAGGATTGTCTCTCGACTTTCCTAACGTGGTTTGCATCTTTCAACATCTGGAACGGAAAACTAAGAATATCAGCAAAAGAAACAAGCTTACCATTCAAGCAACTAAGAGGCCAGAGAAGCCTCAGTCCGTTCTTCAACCCTCACACTATATACTTCTTCCAACGATCTGTTCAAATCAACATCAAATCCAACAAACTTCATGTGCTACCCACACTCATTCACCACAACGACTACAAAAGAGCAATCTGCCCAGACTTCAATATACATGACAACAAAGCTTACGAAGACTTTCAAACACACGCATTTCGCCTCAACAATGCCAGGCAGACTTTCTCCATTACGTTCAACCCAAGATGGATCTACTATTCTGCTGACTACCAGATG

ID:

Thla_scaffold149_LTR-Caulimovirus_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

306

Start:

278244  

End:

278549

Strand:

+

>Thla_scaffold149_LTR-Caulimovirus_27

ATGACATCTTCTGTTAGAAAGTGGTGTAAGTCTAAACATGCATCTTCTTATGCATCTCCGAAAACAATTAATTCAAGAGAAATAATGTCAAAGTTTACTACTTTTGATAAAAATATATCTCATAATCAGTTACCTCATGTTAATCCAGAAAATATATATCAAATAGGAACTTTTGATTTTTGAATAGTGTATTGAATTAAACAACATTAACAAACTATATCATTACAAAATGAATTTGAAAAAATTAAATTTCTTTCTTCTATGACCTTACAAAGATATAGACAAAATAAATTTAATTACATTCAT

ID:

Thla_scaffold149_LTR-Caulimovirus_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2600

Start:

282363  

End:

284962

Strand:

+

>Thla_scaffold149_LTR-Caulimovirus_28

AAGTGTTCCAGGCACTAAGTCCTAGTGGCAGTGAGACCGTTGGCAAGCCGCAGAAACATCTCTCTTTGATAAGTTCGGGTTAGTTTGCATGTTATCTTGAGTCCAAGTAAAGTATAAAGCATGACATCTTTTGTTAGAAAGTGGTGTAAGTCTAAACATGCATCTTCTTATGCATCTCCGAAAACAATTAATTCAAGAGAAATAATGTCAAAAGTTTACTACTTTTAATAAAAATATATCTCATAATCAATGACCTCATGTTAATTCAGAAAATATATATTAAATAGGAACTTTTGATTTTTAAACAGCGCATTGAATTAAAAAACTTTAACAAACTATATCATTACAAAATGAATTTGAAAAAATTAAATTTCTTTCTTCTATGACCTTAGAAAGAGATAGAAAAAATAAATTTAATTACATTCATATTGGATTAATACAAATAGCAATAAAACCACTATGTAGAAGAGGGATATATTCTCATATACTTATGCTATTAAGAAAAAACTCAATGAAAATTTGAAGAGTCCTTATTAGGGGCAGTACAATAAAATTTATGCAATGGAGCTGTATATCTTAATTGTTCTCCAAACTTTCAAGTAAGCTTATATGGTCCTCTTATATTTAATACATTAGTATTAAACGTACACTTCAGCAAGAAAGACATGACTATTTATTATTGTATCAAATTTATTTCAAGAAATCCACATATGAGTTTAACCCAAAATGTTTATTGCAAGATAATAAAGGATAAATAACTATACTAGCAGTACATAGTAAAAATATTCCAGCATCTACTTACACATCTAAACAACTAAAATGGACAGAAATAATAATTCCTGATCAATGAAAATTTGATATTACTCAACCGCCAAAATAATTTGAACAAAACACTATTATTAGTATAACAGAACAAACTGATAAAAAATACTATTAAAATTTGGATCTTTAATAGAACCATCCTCATTTAGAATAAGCTCATTTTATCCTAGCTCCTCTTTTTCTGATTATAGAATTGGTAGAACTAGTACAAAATCAGAAGAAAGTATAGAACAAATTTTAACTAAAAATCAGGAGAAAAAACCTATTAATTTTCAAGCACCAATTGTAGAACTAGTTCAGAATTCTAAAGTAGGATCTAGTTTTCCCACTTCTCCAACACCTTCTGATTTCAAGTCTATAAATGTTATTTAAAAAAAATGAAATAAATAAACAATACCTTAAAGAAGAGTTTCTATCTTATCAGACTACAAATAAAAGACAATGGTATTTTAAAACAGCCATCAAAGAAACTACTATTAAGTATCGAAAATATGGTATGATAATATGAAATTTGTGGAAACTAATATTCATTTTTCACATGGTTTAAAGCATATTTTATTTTTCACATGGTTTAAAACATATTCTTTAGAAAATGAAATTTGTTACCCTTATAAAAAATTAATCAATTAATACAAGCTCAACTTTGTATACTACTTGGGAAATGACTAATGGAGAAAAACTTAAATCAGTCCATCCACCTTTAAAGGATTTAAAACTTCATACATTCCAAAGATAAGTAGTAGTTACACCATTTAGAACGTGAGCAAATAGAGATGATAGAGACACAATAAGTATGACAGATATTAAAATAGTTTATGAACAAAATCACTACCAAAAGTCAAATACTTTACACCATTTCATCACAAATAGACCATATAGATAAAAATTTCAAAAATGATGAGAACAAAATTAATCATGAGTTACCAACCTCTTTCGTACCTATTTAACTCTATATCACCACCACTTTTTAAACCCTTAACAAAACACGTTAAACTTCCAGAAAATAAAATTCTAAAATCTATTTCAAGTAGATTAGACCGACTATATAAAAATAAAGATATCAATAATATTGATGAAAATAGTCAAATTAATACAAAAGAAGAGATAGATATCAATCGTATCAAAAAACAATTTCAACCATCCACAAAACCATATTATCTTAGACACTCTCCACCTGACCTTTTATTTGAAGAACATCATAAATTTCCTACCGCAAATTTTTTATACTGGAGAAGGTATGTATGAATGGAACATAAATAGTAGATCGGAATATGAAATGATGAATTTATTTCAAGAAATGGGGATTGCTAGTTTGGCTTATAAAGCTAAAGGCTTATCGGACAAGCAAGTATGTGTCGTTTTAGATACAGGAATTAATGGAGCACTAAAATATTGGTTGGATAATACTTTAGACACTATAGCTCAAGATACTATAATAAACCACACTGAAACTAGACGAGTTGAAGGCGAAGATGGACTATATAAAGAAGAAAAAATTCAAAATGATATAGAAATACTATTACATACTATGACTATGCACTTCGTAGGAAACCCTCCCAGGAGAATTAACAAGTAAAAAACTTGTCTTAACAAACCTCAGATGTCCAATGTTAGGAGACTTTAAGTGGTATAAATATATATTTATAACTAATATATTTCAAAGAAATGGTTGTAATCAATCTTTCTGGAAAGAGAGGTTTGTAGCAGGATTATCTTCAGTCTTTGCCGAAAGATTAATATGTAAATTAAAAGATTTTTTCAGGAGGACAGCCAATACC

ID:

Thla_scaffold152_LTR-Caulimovirus_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1789

Start:

325409  

End:

327197

Strand:

-

>Thla_scaffold152_LTR-Caulimovirus_29

AGAAGTTTTGTCGAGAGTATCGAGCAGGCTAGACATCAAAAATTCAATTATCCCGATATCCTTTTCGTTCTTCTTTGAATCTTTAATAGATTCGTGGCTTGAGGAGGAGGTAAGAGTTGGTCTTTTGGTTGGATTGACTAGGAATTCTGAGTCCTTTTGTCTTCTTGGTTTCGTCAGAGTTGTCTTGGTTTTAAAATTGCTAATCAAAGTTGTGCCATAACGAGATGTAAAAGCTTCGTCGGATGATAAGAATCCTGGGAGTGAGGGCTTCGTCCTTTGCTCTTGATAACCAGAGAGAAATCCTGGGGAGTAGGACCCTTAATACATAAGTATTCATAATGGCATACTTCCAAGAGGATTAAAGTATGTATATGCTTGATTCCGATTATGAATCATGCTCTCTAAGCATCTTTGGAGATCTTTTAGCTGGTTTTGAGGCTAGCTGTCTCAGCTTCTTTGCTTCTCAAATTGGACGTATTAACCATCATGAGCTATGTAGGCTGCTTAATCTTTTATTGTAGCCCTCAACAAGCTGATCAACTTATAGTTTATTGTTTTCAAAAATTGATTTTAGACTAAGGCATTCTCTGTTTGCCAATTGAGGACCTTTTCTCCTTAGCTTAGCTGGTCAGGTCTAGAAGAATTGATGGCTCTTATGAGGATCTTCGGACTATGAGCGATATCGTCTTTGGTGAAATCCTCATATGGAGGGAAATTGTTTGCTTGCATCATCATGATTTTATGTTCTTTCCATTTCTCCCAGTATTTGATAATAAAATAATATTTGCCATCACCTAACGGTCTAACAGTGGGATCGCCCTCGAGATATCTCTTATAAAGGGAATCTTTCTTTTTTCTTCGTCTCTTGCGGATTTTTTCGTAAAACTCATAGAAATCTTCCATGCAAGCAGCGCAAGAACATACATTAAAGTATTGATGTTCATTCTCATCCATGAAAGGGTATACGACTGTTCCGTCTTGACCAAAAGAAATTGGTTTTGGAACTTGCTCCCTTGATGAACCAAGGAAATCGTGTTCATCAATTTGTATAGCAAATTGAGTGAACAGTTGCTTCCGAAATGATGATGATCTTGGGTTTTTTGAACTTTATCTCCGTTGTTCCATCATTTCGAGAATGGAAGCTGACCTCAGATGTCTGGACCGGCATCTGGGTTGCCTGATGTAGGTTTTTGTAGCTCGTGACCCATGATTCCTGTAGTCGACGTAGTAACTCATCGCGAGAGATTTCTCGAGGAAACTGAATTGAGTTGGGTGCTTGCGATGCCGATGTGACTTCGAGATATAATGCTTCATCAGATGATGGTAGTGCAAGATCAAGAGCATGATCTTGGATTCGATAGACGATCTGATTGTGTAGGATAGCTACGACGCTTTTTTCTTCCATAGGTGCTCTGACTAGTTGCAGCTGAACTTTGAGCGTTTGTAGAATATTGGGATCTTTTAGAGAAACATTAAAGTTTGGAAACAGTGTTACAAATACTGTTCCTGCATTTAATGTTGTCTGAACCGTTCCAATGCAAGCTTGTTGGTATGACCTTAGCCTTGAGTCGACTAAAGCTATGGGTGCTACCACTGGTAGACCTTTTCGAGCGTTTAAGGTCAGACCAATTCGTACCATCCCAAAGTGCAGATGAGTGTATCCTTGCTGTTGCCACAACCTTGGTAGGTTTTCTGGAATATTGAGCGAAATGAATTGTTCTTCTTCTGTGGCTGGGACTTGACAGGATGAAAATTTACTGGATTGCATGACTCTTCTGCATGAAGATGG

ID:

Thla_scaffold152_LTR-Caulimovirus_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

374

Start:

327202  

End:

327575

Strand:

-

>Thla_scaffold152_LTR-Caulimovirus_30

ATGAGTTCACGAACACCTTTGACTGAAAAGTAGCTAGGCTTTTTAGTAAAGTATCTGTATAGATTCACCAGTGGGAGGGTAGTTTCTAGTAATTGATCTCTCAGAACATATTCGATTTCGTATAGGGAATTTATGCTGGAAGAGGACATACAGCTTTTGTTTTTTGGTAAAGTAGAAATTGAAAATGGAGAATCAATGGATAAAGGATTTGTAGTAGACATGGTGAAAAAGTGTTTTTCGGAACATTAAAAACAATCAATCATAAACAATAATTTTTTTTTTTTCATTTCGAAAGCAGAGGGCTATGATACAATTTTTTGGCATGGACCTCTGGCATCGTGTTGACAGACGGGGTGGTAATTTCCAAGTAAGGG

ID:

Thla_scaffold152_LTR-Caulimovirus_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1513

Start:

327734  

End:

329246

Strand:

-

>Thla_scaffold152_LTR-Caulimovirus_31

TTGGTCTTTTGGTTGGATTGACTAGGAATTATGAGCCCTTTTGTTTTCTTGGTTTCGCCCGAGTTGTCTTGGTTTTAAAATTGCTAATCGAAGTTGTGCCATGACGAGATGTGAAAGCATCGTCAGATGATAAGAATCCTGGGACTTAGGGCTTCGTCCTTTGCTCTTGATAACTAGAGAGAAATCATGGGGAATATTCATGATGGCATACTTCCAAGAGGATTAAAGTATATATCTGTTTGATTCTGATTATGAATCATGCTCTTAAGCATCTTTGGAGATCTTTTAGCTGGTTTTTGAGGATAGCTGCCTCAACTTCTTTGCTTCTGAAATTGGACGCATTAACCATCATGTGTTGTGCCATTGCTGTCATTTCTTGATGAAGATTATTAAGTCGGCCATGGATCTCTATTATTGAGATTTGTAGGCTGCTCAATCTTTTGTTGTATCCCTCAGCAAGCTGATCAACTTTATGGTTTATTATTGTCAAAAGTTGATTTTGGACTATGATTTATTATTCTCTGTTTGCCAATTGAGGATTTTTTCTCCTTGGCTTAGCTGGTCAGGTCCGGAAGAATTAATGGTTCTTATGAGGATCTTCAGACTATGAGCGATGTCGTCTTTGGTGAAATAGTCAGGTGGAGGGAAATTGTTTGCTTGCATCATCATTATTTTAGGTTCTTCCTTTTTCTCCAAGTATTGGACTATAAAATCATATTTGCCACCACCTAACGGTCTAACAGTAGAATCACCCTCGAGATATCTATTATAAAAATGATCTTTCTTTTTTTTCATCTCTAGAGGATTTCTTCGACAGACTCGTAGAAATCTTCCATGCAAGCTGTGCAAGAACATACATCAAAGTGTTGATGTCCATTCTCATTCATGAAAGGTTATACGACTGTTCCGTCTTGACCAAGCAAATTAAATGAACAGTTGCTTCCAAAATGGTGATGATCTTGGTTTTTGAACTTTATCTCCGTTGTTCCATCATTTCGAGAATGGAAGCTGACCTCAGATGTCTGGACCGGCGTCTAGGTTGCCTGATGTAGCTTTTCATAGCTCGTGACCCATGATTCCGGTAGTCGACGTAGTAACTCGTCGCGAGAGATTTCTCGAGGAATCTGAATTGAGTTGGGTGCTTGCGATGCCGATGTGACTTCGAGATATAATGCTTCATCAGATGATGGTAGTGCAAGATCAAGAGCATGATCGTGGATTTGATAGACGATCTGATGGTGTAGGATAGCTACGATGCTTTTTTCTTCCATAGGTGCTCTGACTAGTTGCAATTGAACTTTGAGCATTTGTAGTATATTGGGATCTTTTAAAGAAACATTAAAGTTTGGAAACAGTGCTACAAATAATGTTCCTGTATTTAATGTTGTCTGAACAGTTCCAATGCAAGCTTGTTGGTATGACCTTTGTCTTGAGTCGACTAAAGCCATGCGTGCTACCACTGGTAGACCTTTTCGAGCGTGTAAGGTCAGACCAATCCGTACCACCCCAAAGT

ID:

Thla_scaffold152_LTR-Caulimovirus_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

2226

Start:

329236  

End:

331461

Strand:

+

>Thla_scaffold152_LTR-Caulimovirus_32

CACCCCAAAGTAGTGTTCTGCCTTTCGGTTTAAAGACTGCACCTTCATTGTTCCAGCAGGCAATATTACGAATATTCAAGCCCCTAATTGACACGACTTTAATATACATCGACAACATTCTCTTGTTCTCGTCAAGTGAAAAGAGCATATTCAGACTCTCAAGAAGTTTCAAAGCATTATCAAGGAATTCAGAATTATGCTCTTGGCCAGAAAGATGACTATAGCTCAGCCCAACATCGACTTTCTTGGAATGAAGATTACAAACGGACAGATCACACCACAATCTCATCTAGCTACAGCTCTTCTCGATTTTCCAGAAGAAAATCTCACAAAGAGACAAGTCAAACAATTCCTTGGGGTAATCAATTATGCAAGCAACTTTATCTCGCAACTTTCGCGTTGACAAGACCACTCCAAAAGATGCTGATGAAGAATCCACCACAATGGCCAAAGCGACAAACTGAAGCAGTCAAAAGGCTAAAGATAGAGATACAAAAGCTACCACCTTTACAGATTCCCTCCTCGGGGACACGTATTCTGCAGACTGATGCAAGTGACAAATATTGGTGAGCCATTTTATTCGAAGAGATAAATGGAAAACGTCAAATCTGTAGATATAAAGCGGACGCTTTAAAGATACAGAAATGCATTATCACTCCACGTTCAAAGAAATCTTAGCGGTCAAAAAGGCTATCGAGAAGCTCGAGTTCCATCTGATAGGACATAAATTTTGCATTAAAATGGATATGTCTTCTTTCCCAAAGATGTTACAATTCAAGCAAAAGATGGTCCCACACCAGCAGCTATTACGATGGAGCGAATGGTTTTCAAAGTACGACTTCAAATACTTTTATTTAAAGGGAAAAAAGAATACTCTTGCAGACATGCTCAGCAAAAACCCACCAAAGGAAATTCATCTGATGGCGAGCTCTTCTATATCAGAAAAAGTTATTACGACTTCGAAGCCAACATGCCCGAAGACGCCCATCAGCTAATCAAGAAAAATACTTTACACGAGCATCTTCAACAAAAAGAATCTTCCAATATCAGTCCATCATCTTATCAAAGCACGACATCAACTAACACTACATCGCACCAATGAGGATCCACCCGGACTATCCGTTCGTTCACCTCTACAGGATAAAAAAAATTAGAATATACCAGAAGAAGTTCTATGTTTCCTATGGTATCTCTGCTCAGTTTACACCATTGGTATTACCTTTGACATATGATGGCTGTATCAATACATCAACGTCCAGCAAGGTCAAAGAGATTGTCTCTTGACTTTCTTGACATGGTTTGCACCATTAATCATCTGGAGCGACAAATTAAGAAGATCAGTAAAAGCAACAAGTTTACCATTCAAGAAACTAAGAGGTCGAAATAGTCTCAATCCTTTCTTCAACCCCCATACTATATACTTCTTGACCTGTTTAAGTCAACATCAAGTCCAACAAACTTCATGCACTACCCACACTCATCCACCACAACGGCTACCGAAGAGCAATCTATCCAGACTTCAATATCCATGACAACAAGCCATACAAAGACTTTCAATTACACACATTTCGTCTCCACAATGTCAGGCAGACGTTTCCCGTTCTGTTTAACCCAAGCTGGACCTACTATACTACTGACTACCAGATGAGCCTCGATGAAGATCTAAAATATTTCATGGAAAAACAACAATGCATGACATATATTACGAAGGTAATAAAGATGGACATTCCGGAGATAGTAAAACAAGAACCAACATCTCAATATTGCCTGCCAGAATATTTCCAAGATGCACAACTCCCTGATGACACCATGAATATTGATGAAATCAGGAGAATGTTCAACATCGACGTTAATACAGAACCTGAGAAAAGCTTCAAAGAACCAGAAGAAGAATATGAATGTCCAAGAGATCATTACAGCTGTTGCGACAAACATATCATCGAGTTCGAAAATGAATCATTAAATGAAGTAATCTAAGTATCTCATTATGTATAACTATTAATAAGCATGTTTAAATAAGTAAGCAATGATGATAATGTAAGCGATGATATAATCGTATAAATAATGATGTAAGCGCTTATGCCAGCACACCATTCCTCCCCTATATATATATGTACCCCCATTGTAAGAAACCATCTCAGAATTTCTATAAAAATCTCTTTTTAGTTTCTCTCTCTAAATAAGTCTGTAAAATCTTTCGTTTTTCAGACTTTCTAACATCTTTAT

ID:

Thla_scaffold156_LTR-Caulimovirus_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

175

Start:

82870  

End:

83044

Strand:

+

>Thla_scaffold156_LTR-Caulimovirus_33

TAGCAAAGAATATGTTATACAAAGCATCTTCTGAAATCTTAAATGCATTTTGGGAAAGAAAAAACATATGGTAGAAATATTTTATAAAGAAATATTCTGTGTAAAGCTAAACTAATACAAATGAATCAAGAATTTTTAAAACATTGTCAATCAGAAATTTATCAAAAGAACAATT

ID:

Thla_scaffold17_LTR-Caulimovirus_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

269

Start:

698534  

End:

698802

Strand:

+

>Thla_scaffold17_LTR-Caulimovirus_34

TTTCTCTCTCTAAAATGAGTCTTTAAAATCTCTAAGTTTTCCAAGCTTCCTAACATCTTCATAAGCCTTGGTTACTTTCTGTCATCAGAAAGACGCCGATCTGTTCCAGATCAATGCTTGAGCTTTCTGGTTAATCAATACGACTTTACTCAACACGACTTTCGGAGGGGGGTAAATTCCTAACAGTGGTTGAGCAAGTAAGAGGCCGGAAGTGCCCAGTAGAGCTCCCTTTACCTGGAAAATACCGCCCCCGTCTGTCAACACGACTC

ID:

Thla_scaffold17_LTR-Caulimovirus_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

280

Start:

698847  

End:

699126

Strand:

+

>Thla_scaffold17_LTR-Caulimovirus_35

CAAAGACGGAATCACTCATAGTCCGAAGATCCTTACAAGAGCTGTCAACTCCACCGGATCTGACCAACTGAGTCAAGGAGAGAAGGTCCTTAATTGGCAAACAGAAAACGCACTCGCCCAAAATCAACTTCTAACAACAATAAATCATAAGATTGACCAACTCACTGATGGCTACAACAAAAGATTGAGTAACCTAAAAAACTCAATAATGGAGATCTACGGCCGACTCAACAATCTTCATCAAGAGATGATAACTATGGCGCAACACATGATGGTCAAT

ID:

Thla_scaffold17_LTR-Caulimovirus_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

4959

Start:

699303  

End:

704261

Strand:

+

>Thla_scaffold17_LTR-Caulimovirus_36

AGCCAGCCTCAAAAACCTGCTGAAATATCTCCAAAGATGCCTAGAAAGCATGATTCACAACCAGAATCGATCTGACTCATACTTTAATCCTCTCGGAAGTATGCCATCGGGATTTCCTACATATCAAGGATCATACTCTCCAGGGTTTCTCTCGGGTTATCAAGAACCTAAGATAAAGACATCTCTTCCAGGTTTCCTTTCATCCGACGAAGCATTCACATCTCGATATGGCATGCCATCGGCTAGTAGTTTCAAAACAAAGCCAACTCGGGCAAAACCAAGAAGACAAAAGGAGTCAGAATTCCTGGTCAATCCAACTAAGAAACCGACTCTAACCTCTTCCTCGAGCCACGAATCTATTGAAGATTCGAAGCAGAAAGAAAAAGATATTGGGATAATCGAATTCTCTATGTCCAATCTGCTCAATACTATTGGTCAAACTTCTAGAGAAGCAACGCAACCACCCCAGGTCAGCTCAACCCAACCTATCGAGATGATCAATCACTTTTCTGACACAAGTTCCAGTAGTGGCGACGAAAGTTCAGACAAAGAGTCACTCCCAAAGCAATTTGCCATCGGAGAAAGATCAACTGCCCCCAAAAGAGAACCAAACATGAATGAGGTGTTTTCAAGCGATGAAGAGATGAGTTACACACGCCCCCGAAATCAAGAACCTCCACATAAGCAGTTCACATCTAAAGTCATGGTCTTTACGTTCGATGACATTCCTTTTGAAAAATGGAATGACCGACTCGACGAATTTCATGCATGGATGACTTCGGAAGCCATTACATCACCCCTGGAGCTAGTCATTCAGCTATTCACGGCACGACTATCAGGAGCCCTCAAAGAATGGTGGAACTCACTCGGTGAGTACCGACATCAGCAAGTCTATCAAACGACTATCCCCTTGCTCCTCAGAGAGATTCACAGAGAATTCATCGGTACACCTACTCACCTAAAGGAACAACTACAAGAAGAATTCTTTTCAGCAAAATGCTGCTCACTCAAAAAGAAGGATCTGGCTAAACATTTTGAACGTCAAACACGGAGGTATTATGCGCTTATTGGTCTCAATAACCCAAGCTTGAAGCAAGTCTACTTTTCCTCCATCGACGACTACCTGAGTCAACAAACCAAGTTGTACATCAGGGACCAAAGACAGACAATCGAAGAAATATCTATTGTTCAAATCCAACAATATGTCTTCCGAACACTCGATAAGCTCTGCAAGCAAAAAGAATTCTGGATGGAATTCATGGACAAATCAAAGCAATTGTCCAAGATATGTGCCAGGCCAGACCTCTCCATCAAATGTTCCAAATCCAAGAAAAATTGTTCATGAGTCACTCGAGGCAAATCTCGAAGATTTAGAAAGCCATTCCGAGAATGCTTTAACAAGTTTAGACGTAAGCGTTTCTTCAGAAAGAAATGAAGCTTCGAAAAGACGACGAGGTGCTTCCTATGCCGCAAGGAAGGACATTTCGCAAAAAATTGTCCAAATAAGTCAAAGAAGAAGAAGCAATATCTCATCAACTCGATATCCAGTATTGCCCCAGATATCGACCTCGACAATCATGACCTCGAATCCGTTCTATCATACGATAGTGACGACAATGATGCTATCTGCGGATACTCGGATTCTGAGGTTTCATCCGAATCATCGTCCGATGAAGAAAAGGAAGATTGCTGCTTTAAAATCACTGAAATTCCACGTCAGGCTGAAGATCAACCGCCACACTTGCCGGTCACGATCTTTGATCCACGAAGAAAAAAAGAACCAGTTCATGCTATCGCATTCATAGATACGGGCGCTCATTCATCTATAATGAATCCCAAAGTTCTTCCGTCCTCTATGTGGCTGCCACACCAACAAGAGTTTTGGGTCGCAAACGCTGGATCGCTATCCGTCAAGCTCAAATCCAAACCAATAACCATAGAAATCTTCCCAGGATGTCAGGTTACAACATAAGTTTTAGGGTCTTCTGCGCCAGGAAAGGACTTAATCATGGGATGGGATACATATTATGCGTTAAAGAAGAAGTTCAATATCTCACTCGAACCGCGAGGAATAAAATGGAAGTCTTTCTACAAAGCCTTCACAACCATACCTCGCATATTTTCACTTGAAGAAGCAGCATCTCCAGAGTTCGTCAAGATCAAAGAAGAAATCATGATAATCTCCTGTGCAGATTCCCATACGGATTTCCTTCAGAAGTGTAACAATCCACTATGGCTAAATTAGGAGTTCTTTGTGTCACTACCTTTCAAGGAAGATGTTTACACCACTCCGACAAAAGCAAGTCATGCAGGAATGCCACCTACCTTATTGCAACAGGCGAACGAAGAATGTGACCAACTGGCCAATCAAGGAATCATCTCAGAAACAAATTCACCATGGGCATGCAAAGCATTTTATGTTAACAACAGAGCAGAATAATCAAGAGGAAAGCTCAGGCTAGTTATCGATTACAAGCCCTTGAACCAATATCTTCAAGATATCAAGTTCCCTCTGTCAAACAAAAAGGCCCTTCTGCAGCATCTACAAGGAGCAACAATATTTTCAAAGTTCGACCTCAAATCAGGATTCTGGCAACTTGGAGTTCACCCAGAAAAAAGGTACAAGACAGCGTTTTGTCTTCCAAATTGCCATCTTCAGTGGAGTGTTTTGCCTTTTGGATTAAAGACAGCACCCTCACTATTCCAGCAGGCGATGCTAAGGATATTCAAGCCATTAATCGACACAGCTCTAATTTACATCGACGACATTCTCTTATTTTCGTCATGTACAACAGAGCACATTCAAACTCTGAGGAAGTTTCAAAGCATTGTCAAGGAATTTGGAATTATGCTCTCGGCCCGAAAGATGATTATAGCCCATCCCAATATTGACTTCCTTGGAATGAAGATTAACAACAGAGAGATAACGCCTCAGTCCCATCTAGCTACAGCGCTTCTTGATTTTCCAGACGAAAATCTCACAAGACGACAAGTTCAGCAATTCCTTGGGGTCATCAATTATGTAAGCGATTTTATCCCGCAACTTTTGCAGTTGACAAGACCACTCCAAAAAATACTGACTAAGAATCCACCACAATGGGGAAGATGACAAACAGAAGCAGTTAAAAGGCTAAAGATAGAGATACAGAAGCTACCACCTCTAAAGATTCCCTCCTCGGGGAAGCGCATTCTACAGACTGATGCGAGTGACAAATATTTGGGAGCCATACTGTTTGAAGAGACAAATGGGAAACGTCATATCTGCGGATATAAAAGCGGACGCTTTAAAGACGCAGAGATGCATTATCACTCCACGTTCAAAGAAATCTTAGCGGTCAAGAAAACCATCGAGAAGTTCGAGTTCCATCTGATTGGACATAAATTTTGCATCGAAATGGATATGTCCTCTTTCCCATAGATGCTACAATTCAAGCAAAAGATGGTCCCACACCAGCAGCTATTACGATGGAGAGAATGGTTTTCAAAATATGACTTCGAATCCTTCTATTTAAAGAGCAAGAAAAACACTCTTGCAGACATGCTCAGTCGAAACCCACCAAAAGAAATTCACCTCATGGCAAGCACATCCACTTTGACAAAGCGTTACTTCGACTTCGAAGCCAGCATGCCTGAAGACGCCCATCAGCTAATCCAAAGAAACTCTCTGCACGAACATCTTCAGCATAAAATTTTCCACTACTAGTTGATCATCCTCTCGAACTACGGTATCAACTGTCACTACATCGCACCAATGGGAATTCACCCGGACTATCGGTTCGCTCACCTCTACCAGATCGAAAATTCAAACATGCCTGAAGAAGTTCTATGCTTCCTATGGTATCTATGCTCGGTCTACACCATAGGCATCACGTTCGACATCGGATGGTTATATTAGTACATCAATGCTCATCAAGGTCAGAAGGAATGTTTCTCAACTTTCCTAACATGGTTTGCATCATTCAACATCTAGAACGAAAAATTAAGAAGATCAGCAAAAGCAACAAGCTTACCATTCAAGCAATTACGAGGACAAAGAAGCCTTAGTCCGTTCTTCAACCCTCACTCTATATACTTCTTTCACTGACCTGCTCAAATCAACATTAAATCCAGCAAACTTCATGCTCTACCCACACTCATCCACCACAATGACTACAAAAGAGCTATCTGCCCAGACTTCAATATACATGACAGCAAACCTTATGAAGACTTTCAAACGCACGCATTTCGCCTCAACAATGCCAGACAGACTTTCCCCATTACGTTCATCCCAAGCTGGAACTACTACTCTGCTGACTACCAGATGAGCCTCAACGAAGATTTACAATATTTCATGTCAAAATACGAAAACATGACAGAAGCTACGAAGGTCAAGAGACAGATCAGCCCGGAGATAGTAAAACAAGAAGAAACGTCCCAACAAGTGTCTCAACAATGCCCGCTAGAATATTTCCAAGACGCACAACTCCCTGACCATTCCATGAATATTGACGAAATCGGGAAAATGTTCAACATCGACGTCAACACAGAGCCCGAAGAAAACTTCGAAGAACCGGAAGAAGAATACGAGTGTCCAGATGATCACTACGGTTGTTGCGACAAACATATCATCGAGTTCGAGATGGATCACTAAATGAAGTATCTCTAAATACTTTATTATGTATAATTATGTAAGATTATAAGCATGTTTAAAATAAATAAGTTGTGATGCAAGTGATGATGTCATCGCATAAGTAATGATGTAAGCGCTTATGTCAGCGCATCAATAATGTAGGAATGAGGTAAGCGCTTATGTCAGCACGCACCATTCCTCCCCTATAAATATGTGTGCACCCCATTATAAAAAAGAGATCAGAATTTGAATAAAAACCTCTCTCTAGTTTCTCTCTCTAAAATGAGTCTCTAAAATCTCTAAGTTTTCCAGGCTTCCTAACATCTTCATAAGCCTTGGTTACTTTCTGT

ID:

Thla_scaffold191_LTR-Caulimovirus_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

1459

Start:

18973  

End:

20431

Strand:

-

>Thla_scaffold191_LTR-Caulimovirus_37

TTCTTGGTTTCGCTCGAGTTTCAGCTGGTTTTTAAGACTGGCTGTCTCAGCTTCTTTGCTTCTAAAGTTAGACGTATTAACCATCATGTGATGTGCCATAGCTGTCATCTCTTGATGAAGATTGTTGAGTCGGCCATGGATTTCCATTATTGAGTTTTGTAAGCTGCTCAATCTTTTGTTGTAGCCATCAGTAAGTTGATCAACCATTTATTTCTCGATGTCAGAAGTTGATTTTGGGCGAGGTCATTTTCTGTTAGCTAATTAAGGACCCTTTCTCCTTGGCTTAGTTGGTCAGGCTCGGTAGAGTTGACGGCTCTCGTGAGGATATTTGGACTATGAGTGATACCGTCTTTGGTGAAATCTTCAGGTGGAGGGAAATTATTTGCTTGCATCATCAAGAATTATGGTTCTTCCCTTTTTCCGAGTATTGGACAATGAAATCATACTTGTCATCGCCTAACGGTCCGACCGTAGGATCGCCCTCGAGATATCTCTTGTAAAAAGGATCTTTCTTTTTTCGTCGTCTCCGGCGAATCTCGTCATTGGATTCGTAGAAATCTTTCATGCAAGCTGTGCAAGAACATACATCAAAGTATTGATGTCCATTCTCATCCTTGAAAGGGTAGACTACTGATCCGTCTTGACCAAAAAAAAGAGGCTGTAGGGCGCCAGCTTTGAATGGGCCATGGAATTCGTGTTCGTCAATTTGTATGGCAAATTGAGTGAACAGTTGCTTCTGAAACGATGATGATCTTGGTTTTTCAAACTTTATCTCTGTCGTTCCATCATTTCAATAATGGAAGCTGACTTCTGATGTTTGAGCCGGAGCCTGGGTTACTTGACGAAGCTTCTCATAGCTTGCGACCCATGATTCTGGTAGTCGACGGAGTAATTCGTCGCGAGAGATCTGTCGAGGAATCTGAATTGAGTTTGGTGCCTTCGATGCCGAGGTGAATTTGAAGTATAAAGCTTCATCAGATGATGGTAGTGCAAGATCAAGCGCATGATCTTGGATTCGATAGACGATCTGGTAATGAAGGGTTGCTACGATGCTCTTTTCCTGCATTGGTGCGCCCACCAGTTGCAATTGAACCTTTAGCGTTTGTAGCAGATTTGGATCTTTCAGTGAAACATTAAAGTTTGGAAATAGTGTGACAAACACTGTTCCTGCGTTTAATGTTGTCTGAACCGTTCCGATGCATGCTTGTTGGAATGACTTTAGTCTTGAGTCGACTAAAGCTATACGGGCTAATACTGGTAGAACTTTTCAAGCGTGTAGGGTCAGACCAATTCGCACTACTCTAAAGTGAAGATGAGTATATCTGTGTTGTTGCCACAACCTTGGTAGATTTTCTGGAATGTTGAGCGAGATGAATTGTTCTTCTTCTGTGGCTGGGACTTGGCATGATGAAAATTTGCTTGATTGGACATACTCCATGACTCTTCTGTTTGAAGATAG

ID:

Thla_scaffold191_LTR-Caulimovirus_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

314

Start:

20434  

End:

20747

Strand:

-

>Thla_scaffold191_LTR-Caulimovirus_38

TGATAAGCTCGCGAACACCTTTGACAGAAAAAATGATGGGCTTTTTAGCAAAGTATTCGTATGGATTCACCAGTTGAAGAGTTGTTTCATGTAGTTGATCATCCGAAACATATTCGATTTCGTAGAGGGAATTTATACTAGAAGAGGATGAAAGGCTTTTTTTTTTTGGTAAAGTAGAAATTGAAAATAAATAATCGATTGACAAAGGATTTGAAGTAGACATGATGAGAGAATGTTTTTCAGAAAATTCAAAACAATCAATGATTCTTTCTATCAAACCGAAAGCACTGGACTCTGATACTATTTCTAAAACT

ID:

Thla_scaffold199_LTR-Caulimovirus_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

674

Start:

144356  

End:

145029

Strand:

-

>Thla_scaffold199_LTR-Caulimovirus_39

AACAGCGGTTTAAATTGTATTTGTCCCACCAGTTTACTATGTATTCCTGGACCAAAGAGTATGGCATATCAGGTAAAAAGTGTATTAGGTTAAAGTGTCAGGATGGGATCCAAGGTGCCCCCATGTCAATGTGGAAGGATATTTTTGGTAAAGGGCTTATGAGTTCATGTTTTTCGTGTTTAGTGGATACTTTGAGTATTTATGGAGGATAAATTTGGTCACATAGTCCAAACCAGTGTCATCATTCATAGAACCATCCAGATATTGGTTTGGAACAATAAAAGTCAAAAGATATAAACCAAGATAGGTCATAGATTCGTAGGTAAAAGGTATGTAGGAAGGCTTTTTGGTAATACACATAAGTAAACCCTAAAATATGATACTCCATAATAGAGAACTCTTTTCTAGTATGGAAGTTAAAGAACCAGAGGTCTTGAGGATTGTATACCCTGAAGATTTTACATGAGGAATATGATTTAAGGTCGGAATTGGTCTTATCAGTATCATGGGTTATTTTAACCGACTTTGTGTCTACGAGAAAAATTCATAGAGGTCCGGTTTTTAGTAAGGTTACCGGTGAGATATTGGCTATCCTCGTAAAATATGCAGTTGGTAAAGTGGGTTAGGTCTTTTAGTGATATTAGTTTGGTAAAGGACATGGTAATGAGGTGTTG

ID:

Thla_scaffold199_LTR-Caulimovirus_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Caulimovirus

Length:

382

Start:

145273  

End:

145654

Strand:

-

>Thla_scaffold199_LTR-Caulimovirus_40

TTCTCTTGTTATAAAATCAGATAAACAGTTATTTCTTCTTTTTATATATTGTATATCAAAATCAAAAACAGATAAAATAGCTTGTCATCTTGCAAAAAAAATTTTAGAAACTAAATAAGCATCCTTTTGTAAAATCACTTTTGCAGATTTGCAATCAGCACGTAATAAAAACAATTTGGTTATTAAATCATCTTGAAATTTAGAAATATAGTTTATGATAGATAAAACTCTTTTTTCACTGTAGAATGATTTTTTTGGGACTCGGGCCAAAGTCTAAAATGAAAACGGACCATAGACACATAGGTTGCGTTTGACAGTTTTTGTTTAAGGATTCCGCCATAACTTATTTATGATGCATCGGTTTCTACTATAATAAATGCAT