TBGR-Browse-Rsa-LINE.LINE-L1-Tx1

ID	Class	Order	Superfamily	Length	Start	End	Strand
R8_LINE-L1-Tx1_41	Retrotransposons	LINE	LINE-L1-Tx1	256	28632486	28632741	-
R9_LINE-L1-Tx1_42	Retrotransposons	LINE	LINE-L1-Tx1	84	7454843	7454926	-
R9_LINE-L1-Tx1_43	Retrotransposons	LINE	LINE-L1-Tx1	106	8704008	8704113	-
R9_LINE-L1-Tx1_44	Retrotransposons	LINE	LINE-L1-Tx1	84	10680376	10680459	-
R9_LINE-L1-Tx1_45	Retrotransposons	LINE	LINE-L1-Tx1	107	14206213	14206319	+
R9_LINE-L1-Tx1_46	Retrotransposons	LINE	LINE-L1-Tx1	91	18536320	18536410	-
R9_LINE-L1-Tx1_47	Retrotransposons	LINE	LINE-L1-Tx1	99	18796677	18796775	+
R9_LINE-L1-Tx1_48	Retrotransposons	LINE	LINE-L1-Tx1	99	18822653	18822751	+
RUS00011_LINE-L1-Tx1_49	Retrotransposons	LINE	LINE-L1-Tx1	135	405025	405159	-
RUS00307_LINE-L1-Tx1_50	Retrotransposons	LINE	LINE-L1-Tx1	121	80356	80476	-
RUS00328_LINE-L1-Tx1_51	Retrotransposons	LINE	LINE-L1-Tx1	88	19632	19719	+
RUS00512_LINE-L1-Tx1_52	Retrotransposons	LINE	LINE-L1-Tx1	114	6266	6379	-
RUS00893_LINE-L1-Tx1_53	Retrotransposons	LINE	LINE-L1-Tx1	108	23007	23114	-
RUS01131_LINE-L1-Tx1_54	Retrotransposons	LINE	LINE-L1-Tx1	89	6504	6592	-
RUS01296_LINE-L1-Tx1_55	Retrotransposons	LINE	LINE-L1-Tx1	101	9618	9718	+
RUS01374_LINE-L1-Tx1_56	Retrotransposons	LINE	LINE-L1-Tx1	84	1788	1871	+
RUS01408_LINE-L1-Tx1_57	Retrotransposons	LINE	LINE-L1-Tx1	116	12828	12943	-
RUS01724_LINE-L1-Tx1_58	Retrotransposons	LINE	LINE-L1-Tx1	116	7982	8097	+
RUS01841_LINE-L1-Tx1_59	Retrotransposons	LINE	LINE-L1-Tx1	82	4184	4265	+
RUS01924_LINE-L1-Tx1_60	Retrotransposons	LINE	LINE-L1-Tx1	122	7483	7604	+

Raphanus sativus (v1.0)

ID:

R8_LINE-L1-Tx1_41

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

256

Start:

28632486

End:

28632741

Strand:

-

>R8_LINE-L1-Tx1_41

CTTGAGTCTATTGGCTAATAGTTTAGAGATCACCTTATAAATGACGTTGCAACATGATATAGGTCTGTAGTCCTTCATCTCCATCGCATTCGTTTTTTTCGGTATCAAAGCCAAGATTGTAGAATTAATACCCTTAGGAAGGAAGCCTTTATCAAAGAAAGCTTGAACTGCTATCACAAATTCTGAACCAATGATTTCCCATGTAGCCTTATAAAATTCTGCATTGAACCCATCTGGTCCAGGAGACTTATTTGTT

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_42

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

7454843

End:

7454926

Strand:

-

>R9_LINE-L1-Tx1_42

AACAGCAATTATGAAATCCTGCGCAACAATATCCCAAGAGGTTTTGAAGAACTCACTGGGAAATCCATCAGGGCCAGGTGACTT

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_43

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

106

Start:

8704008

End:

8704113

Strand:

-

>R9_LINE-L1-Tx1_43

AGAGAGAGAGAGAGAGAGAGAGATATCTGAAAAAATAGATTGACTTTTTTTTTCTTTTTTTTTTTGAAAAGTATTAGTTAATCATATATCAAACATTCTACATCAT

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_44

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

10680376

End:

10680459

Strand:

-

>R9_LINE-L1-Tx1_44

TACATCTCCTCCAATAGTTCCCCAAGCAGCTCTGAAAAATTCACTTGTATATCCATCAGGACCCGGTGATTTATCCAGAGGCAT

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_45

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

107

Start:

14206213

End:

14206319

Strand:

+

>R9_LINE-L1-Tx1_45

CTATAAAATAATATCTAAGGTCTTATGCCAAAGATTAAAAAGGTTCTTCCACATTTGATATCTGAGACTCAGTCGGCTTTTGTGGCAGGGAGACAAATATCAGATAA

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_46

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

91

Start:

18536320

End:

18536410

Strand:

-

>R9_LINE-L1-Tx1_46

ATGTGCCACAAAAGCCGACTGAGTTTCTGATATCAAGTTTGGAAGAAATTTCTTTAATCTTTGGCATAAGACCTTAGATATTATTTTGTAG

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_47

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

99

Start:

18796677

End:

18796775

Strand:

+

>R9_LINE-L1-Tx1_47

CTATTCAAGATGCCTCGAAACAAAACTCCGGGACCAGATGGGTTTCCTGTGGAATTCTTCAAAGGCGCTTGGTCCATAATCAGACATGAATTCTTAGCT

Raphanus sativus (v1.0)

ID:

R9_LINE-L1-Tx1_48

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

99

Start:

18822653

End:

18822751

Strand:

+

>R9_LINE-L1-Tx1_48

CTATTCAAGATGCCTCGAAACAAAACTCCGGGACCAGATGGGTTTCCTGTGGAATTCTTCAAAGGCGCTTGGTCCATAATCAGACATGAATTCTTAGCT

Raphanus sativus (v1.0)

ID:

RUS00011_LINE-L1-Tx1_49

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

135

Start:

405025

End:

405159

Strand:

-

>RUS00011_LINE-L1-Tx1_49

ATATTATCAGAAATCTGTCTTCCAGCAACAAAAGCTGACTGGGTTTCCGATATAAGGCCTGGTAGCACTTTTTGAGTCTCTGGCATAAGACCTTAGAGATAATCTTATAGCTCACATTACATAAGCTAATGGGCC

Raphanus sativus (v1.0)

ID:

RUS00307_LINE-L1-Tx1_50

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

121

Start:

80356

End:

80476

Strand:

-

>RUS00307_LINE-L1-Tx1_50

GAACACCCTTGTCTCAGCCCTCTTGAACTTTGAAAATAGCCCCCAAGCTCACCATTAACCTGAACTGAAAAAGACGGAGTAGTTATACAAAACTTCACCCAGTGTATAAATTTCTTAGGAA

Raphanus sativus (v1.0)

ID:

RUS00328_LINE-L1-Tx1_51

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

88

Start:

19632

End:

19719

Strand:

+

>RUS00328_LINE-L1-Tx1_51

GATGATGCTAAGGAGATCAAAGATTACCGGCCTATAACCTGCTGTAACATCCTGTACAAAGTGATCTCGAAAGTTTTAGCAAACAGGC

Raphanus sativus (v1.0)

ID:

RUS00512_LINE-L1-Tx1_52

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

114

Start:

6266

End:

6379

Strand:

-

>RUS00512_LINE-L1-Tx1_52

AGAATTCTGCAGGGAACCCATCAGGCCCTGGAGATTTATTATTCGGCATCGCAAAGAGAACCTTACGAACTTCTTCTTCAGTTACTTCTGCTTCAAGTAAACGAAAATCTTCAT

Raphanus sativus (v1.0)

ID:

RUS00893_LINE-L1-Tx1_53

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

108

Start:

23007

End:

23114

Strand:

-

>RUS00893_LINE-L1-Tx1_53

TTATCTGATATTTGTCTCCCTGCCACAAAAGCCGACTGAGTCTCAGATATCAAATGTGGAAGGAACTTTTTTAATATTTGGCATAAGACTTTAGATATTATTTTGTAG

Raphanus sativus (v1.0)

ID:

RUS01131_LINE-L1-Tx1_54

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

89

Start:

6504

End:

6592

Strand:

-

>RUS01131_LINE-L1-Tx1_54

TCTGCCTTTTTAATATTTGCTATTAGTGCTTCGGTACACATAATAAACAAATAAGGAGATAATGGGTCCCCCTGCCGTAGACCTCTATT

Raphanus sativus (v1.0)

ID:

RUS01296_LINE-L1-Tx1_55

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

101

Start:

9618

End:

9718

Strand:

+

>RUS01296_LINE-L1-Tx1_55

TACAAAATAATATCTAAGGTCTTATGCCAAAGATTAAAAAAGTTTCTTCCACACTTGATATCTGAAACTCAGTCGGCGTTTGTGGCAGGAAGACAAATATC

Raphanus sativus (v1.0)

ID:

RUS01374_LINE-L1-Tx1_56

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

84

Start:

1788

End:

1871

Strand:

+

>RUS01374_LINE-L1-Tx1_56

CTATAAAATAATCTCTAAAGTCTTATGCCAGAGATTAAAAAAGGTTTTACCTGATAGGATTTCGGAAACCCAGTCAGCCTTTGT

Raphanus sativus (v1.0)

ID:

RUS01408_LINE-L1-Tx1_57

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

116

Start:

12828

End:

12943

Strand:

-

>RUS01408_LINE-L1-Tx1_57

AAATCAGCTCCAATAATAGGCCATGATGCCTTGTAAAATTCTGTAGTATAGCCGTCTGGTCCCGGTGATTTCTCATTAGGCATTGCGAACAGCACTGTCTTGATTTCGTCAAAAGT

Raphanus sativus (v1.0)

ID:

RUS01724_LINE-L1-Tx1_58

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

116

Start:

7982

End:

8097

Strand:

+

>RUS01724_LINE-L1-Tx1_58

TTAGCGTTGATCCCAAAGAAGACTGATTCTATGGAGATGAAGGACTATAGGCCAATTGCTTGTTGCAATGTCCTATACAAGGTTGTTTCTAAGATCTTGGCTAATAGATTGAAGGA

Raphanus sativus (v1.0)

ID:

RUS01841_LINE-L1-Tx1_59

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

82

Start:

4184

End:

4265

Strand:

+

>RUS01841_LINE-L1-Tx1_59

GGAAGTTGAACTGAAGTCAGCTTTCAATGTCAGTATAAAAAACACTAGGGTGATTCTTTTTTGTGTCTTCTAACCAGATTTC

Raphanus sativus (v1.0)

ID:

RUS01924_LINE-L1-Tx1_60

Class:

Retrotransposons

Order:

LINE

Superfamily:

LINE-L1-Tx1

Length:

122

Start:

7483

End:

7604

Strand:

+

>RUS01924_LINE-L1-Tx1_60

TTATCCCTTATACCAAAGAAGGAGGAGGCGAAAATGATGAAGGACTACCGACCAATATCCTGTTGCAACGTACTCTATAAGGTAATATCTAAGATAATAGCTAATAGATTGAAGAGTATTCT