ID Class Order Superfamily Length Start End Strand View
LA_C11349_LTR-Copia_21 RetrotransposonsLTRLTR-Copia6441644-
LA_C1145_LTR-Copia_22 RetrotransposonsLTRLTR-Copia1591159+
LA_C11451_LTR-Copia_23 RetrotransposonsLTRLTR-Copia4651465+
LA_C11617_LTR-Copia_24 RetrotransposonsLTRLTR-Copia27911289-
LA_C11841_LTR-Copia_25 RetrotransposonsLTRLTR-Copia6854688-
LA_C11851_LTR-Copia_26 RetrotransposonsLTRLTR-Copia4865490+
LA_C11985_LTR-Copia_27 RetrotransposonsLTRLTR-Copia320305624+
LA_C12069_LTR-Copia_28 RetrotransposonsLTRLTR-Copia7061706+
LA_C12115_LTR-Copia_29 RetrotransposonsLTRLTR-Copia7081708-
LA_C12227_LTR-Copia_30 RetrotransposonsLTRLTR-Copia5421542-
LA_C12227_LTR-Copia_31 RetrotransposonsLTRLTR-Copia172540711+
LA_C12639_LTR-Copia_32 RetrotransposonsLTRLTR-Copia7351735-
LA_C12693_LTR-Copia_33 RetrotransposonsLTRLTR-Copia19730226+
LA_C12693_LTR-Copia_34 RetrotransposonsLTRLTR-Copia140530669+
LA_C12739_LTR-Copia_35 RetrotransposonsLTRLTR-Copia114154267-
LA_C12799_LTR-Copia_36 RetrotransposonsLTRLTR-Copia3711371-
LA_C12815_LTR-Copia_37 RetrotransposonsLTRLTR-Copia9086175+
LA_C12815_LTR-Copia_38 RetrotransposonsLTRLTR-Copia211347557+
LA_C12815_LTR-Copia_39 RetrotransposonsLTRLTR-Copia157588744+
LA_C12831_LTR-Copia_40 RetrotransposonsLTRLTR-Copia7331733+

< 2 3 4 5 6 > Total 333


Leavenworthia alabamica (v1.0)

ID:

LA_C11349_LTR-Copia_21

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

644

Start:

1  

End:

644

Strand:

-

>LA_C11349_LTR-Copia_21

GAAAGTTTCAAATACCACTGCCTAGATGCTTGTTTCAAGCCATAGATAGACTTGTGTAAGCGACAAACAGAATTAGGAGGATAAGAAGTACCTGTAATGTCTGAATAACCAGGAGGTAATTTCATAAAAATCTCTTCATCCAAATCACCATTAAGAAAGGCATTAGAAATGTCTAATTGAGATAATGACCAATTCTTCTTAACTGCAACATCAATAATGATCCGGATGGTAGATAGTTTTGCTACAGGGGAAAATGTTTCTTCATAATCAACACCCTCTTCTTGAGTAAAACCTTGAGCAACCAACCTAGCTTTATACCTCTCAACACTCCCATCAGCTTGATATTTAACAGTAAATACACATTTACAACCAATAGCAATCTTATCGGCACGTAAAGCACAAATACTCCAAGTATGAGTCCTCTCCATAGAACCAATCTCTAAACCCATTGCATCACACCACAACTTATCAAGCATGGCCTCCAAATATTTCTTGGGTTCTTTTATTTTGGTAATGGCATTTATGAAAGCTTGGAAAGGCTCAGATAAATTGGAATAAGAAATATAATTGGCTATAGGATAAGGTGTAGTATCAGTGGTAGAATAGCAATGAAAATCCTGCAAGTGAGCTGGTGTTTTCTTTTG

Leavenworthia alabamica (v1.0)

ID:

LA_C1145_LTR-Copia_22

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

159

Start:

1  

End:

159

Strand:

+

>LA_C1145_LTR-Copia_22

GTGAGAAGCGATAATGGAACTGAATTCTTGTGTTTGTCGAAATATTTTGAAGACACAGGAATAATGCACCAGACTTCTTGTGTAGCTACTCCACAACAGAATGGTCGGGTGGAGAGAAAACACCGACACATTCTTAATGTAGCACGATCACTACTCTTT

Leavenworthia alabamica (v1.0)

ID:

LA_C11451_LTR-Copia_23

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

465

Start:

1  

End:

465

Strand:

+

>LA_C11451_LTR-Copia_23

GTTTATTATGGTAAACTGAAAAAGATGTGGGATGAATTAGCTGTATATAAGCCAATTCGTTCATGTGAGTGTGGAGAGATTGCTGCAGCATCGAGACAGGATCAAAGAAGAAGATCATACACATGAATTTTTGATGGGGCTGGATAACTCGAAATTTGGAACAGTTCGTTCAACTATCATTAGTGTCAAACCACTTCCAAAAATATCTCAGGTTTACCAACGAATTATCAGAGAGGAGAGAAAACAAACGATTGCTAGAAATCAAGAGGTTCGAATAGATGCTGTGGGGTTTGCGGTTCAAGCTGGTTCGTATTCAAGAACAGAGACTTTAATGTGTTCTCATTGTGGGAAAGCAGGGCATGATGTCTCAGATTGTTATTAACTGAAGGGTAACCCTGAGTGGTGGGGCGAAAGAGGAAGAAGTGGTAGAGCTCATGGAGGTTCACGAGGTAAAGGCCGTGGTGG

Leavenworthia alabamica (v1.0)

ID:

LA_C11617_LTR-Copia_24

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

279

Start:

11  

End:

289

Strand:

-

>LA_C11617_LTR-Copia_24

ATATATCTTCTTCGAAACACTATTGAGTAGCCATGCCTTAACCATACTGTTACAACGACACCATATCTTGCAATATGGATCATCCTCAGCCGGTTTAACTATAGATCCATCAATGAAACCTAGTTTGTTCTTAGCCTCTAAGCTAGTAACCATTGCAATCATCCAGGTTCCATAATTTGTACCATCTAACAACTCAGATACTAGAGACAATCCAGGATAATCAGATCCTAACAAGTGATAAGGACTGTGGAGATTATCTGGAGAAATTGATACCTCAAA

Leavenworthia alabamica (v1.0)

ID:

LA_C11841_LTR-Copia_25

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

685

Start:

4  

End:

688

Strand:

-

>LA_C11841_LTR-Copia_25

AACAAGAAGCTGCTAAACTTATCAAACCAAGCTCTTGGTGATTGCTTAAGGCCATAGAGAGACTTATGCAAGTGACATACATAATCAGGTTTCTCAGGATCTACAAAACCCGCAGGTTGCCTCATGTAAACAGTTTCAGTTAGATCTCCATGTAAGAAAGCATTTCTCACATCCATTTGTTTAATATCCCATTTCATAATGGTAGCCAAATGAAGAACTACTCTTACTGTAGCTGATCTAACAACTGGACTGTATGTTTCTAGGTAATCAATGCCTTCCTCTTGATCAAATCCTTGTGCAACAAGCCTAGCTCTAAGCTTGTCTAATGAACCATCAGCATTCAATTTGGTTCTAAATATCCATTTACTACCCAAGACATTCATATTTGGTTCATAAGGTACTAAACTCCATGTTTGAGTATCCATACAGTTTCCATACTCTTCATTCATTGCAGCATTCCAACCAGCATGTTTCAATGCTTGTGTAACAGTTTTTGGTTCAGGATTGTGTACCTTATGACTGAGCATAACATATTTCGGATTTGGTTTTCTGATTCCAGCTTTAGCCCTTGTGATCATGTGATGTGTAGATTCAGATGGTGTGGTGGAACTAATCAAGTCACTTGATGAGGGAGAATAGCTGTTGCCTATAGGAACAAGATCTAAGCTTGCCGTACACCCAGAAC

Leavenworthia alabamica (v1.0)

ID:

LA_C11851_LTR-Copia_26

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

486

Start:

5  

End:

490

Strand:

+

>LA_C11851_LTR-Copia_26

TGTTAAAACTGCTCATGACATTTGGATCAATTTGTGCAAAAGGTTTAAGCAGAATAATACTCCTAGGTTATATCATATTGAACAACAATTGTATCTGTTACGCCAAGGATCTATGGATATTACTGCATATTATACTCGGTTAGTTACAATTTGGGAAGAGATGAAGATGACTCAAGCTACTCCAGTCTGTACTTGTACACATTGTTCTTGCGATATTAATGAGAAATGGCATCAGGTTTTTGAAAGGAGCATTGTTAGGCGTTTTCTGTTTGGGTTGAATGATTCTTATGAAGCTATTCGTGCACAGATCATCATGCTTGATCCTCTACCCGACCTGGATAAGGTTTTTAATCTGGTTATTCAACATGAACAACAATCTTCTGTCAAACTAATCCCTCAAGGAAATTCAGTTGTGTTTCAAGCTTCAACTCAACCTGTGTTGCCTCCATTGTTACAAAATCCTACAGGGCTGAGTCCGGATATAAT

Leavenworthia alabamica (v1.0)

ID:

LA_C11985_LTR-Copia_27

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

320

Start:

305  

End:

624

Strand:

+

>LA_C11985_LTR-Copia_27

ACATGGTATCGGAGGGTTCTCCTGTATATATTCTCTCTCTTTTCTTCTTCTTCTCTGCTGCTCTCTGCTTCTCCTGTCTTTCTCATTCTCTCTTCTTTCTCTATTTTTCTGCTACTCTCCATCCTCTTTATTCTTCTCTTCTCTTTATTACTTCTCTCTCTCTTATAAATTGCTCCGACAACCACTGATAGATCTTTGAGCATGATTCAAATCAAATCTCATATCCCAATTATTCTTGATATGAATTATGATTTGTGGCGAGAACTCTTGGAAACGCACTGCCACAGTTTCACCGTTCTTGGTCATCTCGACGGCAGCTC

Leavenworthia alabamica (v1.0)

ID:

LA_C12069_LTR-Copia_28

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

706

Start:

1  

End:

706

Strand:

+

>LA_C12069_LTR-Copia_28

CTAACGGATCCATTTACTAAAGGTTTGGCTCATGATCAAGTTTGTAAAATCATCAAAAGGAATGAGGATATTGCCTATAACCAAAGAGGATGTTTGATGGTAACCCCACCTACGTGACTGGAGATCCTAAGAAGTAGGTTCAAAGGGAAAACTAAATCAATCAAAATCTAGAAAAGCACTGATAGACTTTAAAGTCACTATTCAGTTCCTAAGATGATAAATATTGCTTTATGTATATCAACAAGGATAAGTGTCAGCTTTTAATGATACGAATAAAAGCTTTCTAGTTGGAGTATTATACGATACTTTTTAAAAACAAAGACTAGTTTCGATCACCTAGTGCTTGTGAAATGCGGCCGTTTCTAGGAGAATGAAGATAAAGCTATATTCTCTAAGTTCACTCACGAATAACCAGGCAAGTTCAAGGCCAAAATGAACATAATATAGAACCTAGTTCTGTGAGAAAATGAAACTGTGTGATAGTTATTGTCTCGGTTTACATAAAAGTCCGGGAGGTTCAAGACATCATGTCACTTCCTGGTCGAGTGGATCCGATAACTATTCACTACGAGTAGTTCAAGGCTGAAATATGCTACTATCTCAGATGCAGTGAGTTTTTGTTTGTACTCTCAAAAGTCCGTCTGTCTAGTCTTGTCTAGTTAGGTCAAGTCTTTTGAGTCGTCATGTGTCTAGAGTAATTTCTATT

Leavenworthia alabamica (v1.0)

ID:

LA_C12115_LTR-Copia_29

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

708

Start:

1  

End:

708

Strand:

-

>LA_C12115_LTR-Copia_29

CCAAATTCCAATAGGTAATTGCTGAATTTATCAAACCAAGCCCGAGGAGATTGCTTCAAACCATACAGTGATTTGTGTAGGTGACAGACATAATTTGGCTTTGTTTTGTCTTCAAACCCTGCAGGTTGAGTCATGTAGACAGTTTCTGTGAGATCACCATGAAGAAAAGCATGTTTTACGTCCATTTGTTTGATTTCCCACTCCATAATGGTGGCTAAATGGAGTACTGATCTCACTGTGGGGGTCCTAACAACAGGACTGTACGTTTCTAAGTAATCAATCCCTGCTTCTTGTTCAAAACCTTTCGCCACAAGTCTTGCTCTGAGCTTGTTTAGGGAGCCATCTGCATTGAGTTTAGTTCGGAATATCCATTTGCTTCCTAGTACGTTCATGTTTGGAGTGTATGGAACAAGAGTCCAGGTTTGAGCTTCTGCACAGTTCTCAACTTCTTCGGTCATTGCCATGTTCCAGCCTGGATCTTTTAATGCCGCGGTGATGGTTTTTGGTTCTGGATAAGAGATTTTATGAGTAAGCATAGCATATCTAGGATTTGGTTTTACAATACCTGTTTTGGACCTTGTCTGCATTGGATGAGTTGATTGTGATGATGATGCATTTGATGCAGGTACTTGAGGAGCAGGTACAGAAATGTCAGAGGTGCTAGATGAGGATGGAGAGCTGTTGCCTATAGGATCAGGTTCAATGCCT

Leavenworthia alabamica (v1.0)

ID:

LA_C12227_LTR-Copia_30

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

542

Start:

1  

End:

542

Strand:

-

>LA_C12227_LTR-Copia_30

TGCTGGCCGTGAGATACAGCAGACTACCGATCATGGCTCGGTAGAGTGTTGGGTCAACTTCAATGCCAAGATCATCTTTGGACAGTTTACTGGTCGAGCTCATGTGACTGCGAGACGTCTTGCTTGTCTGATGTTCAAATCATTTGACCAATTTTTTGGCATAGGTACTTTGCGAGATAAAAATGCCTTCATCAGTCTGAGTGATTTGAAGTCCAAGAAAGTAACTCAGTTCACCAACCATACTCATCTCGAACTCATCAGTCATGGTTTTGACAAACTGAGTGACAAACGCTTTCCTGTTGCTACTAACACCACATCATCCACATAGATCTGAACAACAAGAATGTCATATCCATCCTGCTGTATAAACAGTGTCTTGTCCACATTGCCTCTGGTAAAACCATTCGCGAGAAGAAATTGAGTCAATCTTTCATACCAAGCACGAGGTGCTTGTTTCAGACCATAGAGTGCTTTTTTTAAACGATATACATAGTCTGGATAATGTGGATCTTTAAAGCCTTTTGGTTGTGCAACATAGAAAT

Leavenworthia alabamica (v1.0)

ID:

LA_C12227_LTR-Copia_31

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

172

Start:

540  

End:

711

Strand:

+

>LA_C12227_LTR-Copia_31

AATAAGGCACGCCTGGTAGCACAAGGATACTCACAAGTTGAGGGAATTGATTTCGATGAAACATTTGCACCTGTTCCTCGACTGGAGTCTATCCGTTTGATGCTTGGGATTGCCTGCACTCTAAACATTCGGCTCCATCAAATGGATCTGAAGAGTGCTTTTATTGATGGAG

Leavenworthia alabamica (v1.0)

ID:

LA_C12639_LTR-Copia_32

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

735

Start:

1  

End:

735

Strand:

-

>LA_C12639_LTR-Copia_32

CGACTTACCAGACCAACAGAGTAGGCTAAATCAGGTCGAGACCCCACCATTGCATACATCAGACTTCCAACCGCGTTTGAATAAGGTACACCCTTCATATCCTTCTCTGTCTCAGCTTTATCCTCCGCTTAGTGCTAGATAGTTTGAAGTGACAGCCTATAGGTGTAGAAACTGGTTTAGATTGATCCATAGAGAACTTCCTGAGTACTTTCTCTAGATAGGCTTGTTGTGATAGTGTTAGTATTCCTTTAACTCTGTCTCTGTGAATGTCCATACCCAAAATTCTTCTAGCTGGTCCTAGGTCTTTCATTTCAAACTCATTTCCAAGAATATCTTTGAGTTTTTGAATTTCTCCCATATCCTTAGCTGCAACCAACATGTCATCTACATATAACAGTAGATAGACATAATTCTCTTCTGCATAGCATTTAAAATACACACAAGGATCAAACTCACTCTTGAGATATCCTTGTGCTTTTATAAACTGATCAAACCTCAAATTCCACTGTCTTGATGATTGCTTCAAGCCATACAAAGACCTTTGTAATAAACATACTTTATCTCACTCAGAAAACCCTTCAGGCTGCACCATTATTATACTTTCTTCTAATGAGCCATGTAGAAAAGCAGTCTTTACATCCAACTGTTCTAATTCCAGATCCAAATCAACTACCATAGACAACACCAATCGTATAGTAACATGCTTAACCACTGGTGAAAAAACTTCATTATAAT

Leavenworthia alabamica (v1.0)

ID:

LA_C12693_LTR-Copia_33

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

197

Start:

30  

End:

226

Strand:

+

>LA_C12693_LTR-Copia_33

TATGTTGATGATATATTATTGGCTGCTAATGACATGGGAATGATGTGTGACATAAAGAAATATCTCTCTAAGAACTTTGAAATGAAGGATATGGGTGAGGCATCCTATGTGATCGGGATAGAAATCATAAGAGATAGATCACAAGGATTATTAAGCTTGTCTCAGAAAGGTTACATAAATAAAGTCTTAGAGAGATA

Leavenworthia alabamica (v1.0)

ID:

LA_C12693_LTR-Copia_34

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

140

Start:

530  

End:

669

Strand:

+

>LA_C12693_LTR-Copia_34

GATTTTGCCGGATGTGTTGATACAAGAAAATTAACGTTTGGCTATGTGTTCCTCCTAGCTGGGGGAGCAGTCTCATGGAAAAGTGGTAAGCAATCTGTCATTGCTACTTCCACTATGGAGGCTGAATTTGTGGCTTGCTT

Leavenworthia alabamica (v1.0)

ID:

LA_C12739_LTR-Copia_35

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

114

Start:

154  

End:

267

Strand:

-

>LA_C12739_LTR-Copia_35

TCAGAAACTAACAGTTAAAATCTGAATCCCACCGTTGAATCTGAAGCATATAGTATCATGAATAACTCTACCAATTTTTAGCCAGGTCAGACAACATTTCGACCTCCAAACGCT

Leavenworthia alabamica (v1.0)

ID:

LA_C12799_LTR-Copia_36

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

371

Start:

1  

End:

371

Strand:

-

>LA_C12799_LTR-Copia_36

AGACTCTGTTGAAGTGGCGAGCTAAAAAACCCCAAACATCTCTAGAAGTAGCAGCAGCAACAACCACACTGAGAATATCTTCAGAAAATGAACCAAGAAGCCAAGACTTCACAATCTGATCCGTTCTACACCACGCATTGAACTCTGGATTTGGAGTGTCTTCAAGTCGACCATCAATAGTGGGTATCTGAATAAACTGAGTCGGAGGCGGTGTAGCTCCTGTAATGAATCCAAGTAGCCCTTGTCCTGAAAGAAAAATCTCAAATTGTGATTTCCACAAGATATAGTTTCGCTCATTGAGCTTAATCGTAACACAATTTGCAATGTTTAAAGGTGGTTGAATATAGAGTTTCATGGCTCCGATACCATGA

Leavenworthia alabamica (v1.0)

ID:

LA_C12815_LTR-Copia_37

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

86  

End:

175

Strand:

+

>LA_C12815_LTR-Copia_37

TGGAGAAAGAGTTGAACGAAAACCACAAAAAGATAAGGATGCTTAATAGTGGAGGAGAAAAGTTGGATAAGATACTGTTAATGGGCATAA

Leavenworthia alabamica (v1.0)

ID:

LA_C12815_LTR-Copia_38

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

211

Start:

347  

End:

557

Strand:

+

>LA_C12815_LTR-Copia_38

TGCATCAACACAGTACTGAAAACAAGACATGGACAAAGTCGTTTAGGGGAAGGAAAAACTTGGTCTGCTTCCACTCTGGTAAACCGGGACACAAGAGGAACTCATGCTTCAAATTCAAAAGGCAGATCAGGCAGCTATGGAAGGAACAAAAATGCTTTATTGAACCTTTGAAGTTCGGCAAGGTATGGGTCTCTAAACAAAACCTGTACAA

Leavenworthia alabamica (v1.0)

ID:

LA_C12815_LTR-Copia_39

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

157

Start:

588  

End:

744

Strand:

+

>LA_C12815_LTR-Copia_39

TGAGGACATCTGTGCAAATGTAGCGTACACCTCATCTCAAGAAGAGACGTCAACAGCCTGGTACTTTGACAGTGGCTGCTCACGACATATGACAGGAAATCCCAACATACTATCAAATTTTGCTTTCACGACAGGGGGAAAGGTTACATTTGGAGAT

Leavenworthia alabamica (v1.0)

ID:

LA_C12831_LTR-Copia_40

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

733

Start:

1  

End:

733

Strand:

+

>LA_C12831_LTR-Copia_40

AAGACAAATTGTGGCACCAAAACGACTGAATGATTACACTCAGTTTGCCTTTGCACTAATGGCATCTGAGGCGTTGAACACTGAAGAACCACAATGTTATCATGAAGCACAAAGTGACAAAGACAGTGATAAATGGAATGGTGCTTGTAATGAAGAAATTAATTCTATGCATAAGAACAAAACTTGGTTGTTGGTTGATAAGCCAGAAAACAGAAAAATTATTGGATGCAGATGGTTATTCAAATTGAAATCTGGAATTCCAGGAATAGAAACTCAAAGATATAAAGCAAGGCTGGTGGCACGTGGTTTTACTCAAAAAGAGGGGATTGATTATCAAGATATATTTGCACCAGTAGTTAAACACATATCAATCAGAATCTTGATGTCGATTGTTGTAAATCAAGATTTGGAGCTAGAACAAATGGATGTAAAAACAGCATTCCTTCATGGTGATCTTGATGAAGAGCTGTATATGGAACAACCAGAGGGATTTGTTGAAGCTGGTAAAGAACATATGGTGTGTTTGCTTAAGAAGTCGCTATACGGCCTAAAACAAGCCTCAAGACAATGGAACAAGAGGTTTGACAGATTTATGACTGAAGAAAAGTTTGTAAGCAGTGAGCATGATCCATGTGTATATGTCAAAGCAATCAACCAACAAGATCACGTGTACTTGTTATTATATGTGGATGACATGCTTATAGCTGGTAAGAACATGTCAGATGTAAATAAG