ID Class Order Superfamily Length Start End Strand View
LA_C30071_LTR-Cassandra_81 RetrotransposonsLTRLTR-Cassandra29814881785+
LA_C30781_LTR-Cassandra_82 RetrotransposonsLTRLTR-Cassandra1361136+
LA_C30873_LTR-Cassandra_83 RetrotransposonsLTRLTR-Cassandra16016981857+
LA_C30993_LTR-Cassandra_84 RetrotransposonsLTRLTR-Cassandra17655230+
LA_C31123_LTR-Cassandra_85 RetrotransposonsLTRLTR-Cassandra1389541091-
LA_C31563_LTR-Cassandra_86 RetrotransposonsLTRLTR-Cassandra21716911907-
LA_C3257_LTR-Cassandra_87 RetrotransposonsLTRLTR-Cassandra16938206+
LA_C32721_LTR-Cassandra_88 RetrotransposonsLTRLTR-Cassandra2881288-
LA_C32887_LTR-Cassandra_89 RetrotransposonsLTRLTR-Cassandra3171317-
LA_C33161_LTR-Cassandra_90 RetrotransposonsLTRLTR-Cassandra223734956+
LA_C33435_LTR-Cassandra_91 RetrotransposonsLTRLTR-Cassandra2797501028+
LA_C35073_LTR-Cassandra_92 RetrotransposonsLTRLTR-Cassandra33513901724-
LA_C35073_LTR-Cassandra_93 RetrotransposonsLTRLTR-Cassandra26119132173-
LA_C35075_LTR-Cassandra_94 RetrotransposonsLTRLTR-Cassandra3025306-
LA_C35493_LTR-Cassandra_95 RetrotransposonsLTRLTR-Cassandra29518492143-
LA_C36189_LTR-Cassandra_96 RetrotransposonsLTRLTR-Cassandra26120622322-
LA_C36313_LTR-Cassandra_97 RetrotransposonsLTRLTR-Cassandra32312481570-
LA_C36313_LTR-Cassandra_98 RetrotransposonsLTRLTR-Cassandra27117722042-
LA_C36541_LTR-Cassandra_99 RetrotransposonsLTRLTR-Cassandra148249396-
LA_C36555_LTR-Cassandra_100 RetrotransposonsLTRLTR-Cassandra3253327-

< 5 6 7 8 9 > Total 70


Leavenworthia alabamica (v1.0)

ID:

LA_C30071_LTR-Cassandra_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

298

Start:

1488  

End:

1785

Strand:

+

>LA_C30071_LTR-Cassandra_81

TGTAATATCCCATGTTCTGGTATGGTGGTGCATGAGAAGAGGCTTAAGACATTTGATTTGGCTACCTATGTCACCATCTTTTCGGTCAACCACTCTTTCAGAACTCTGCAGTTAAGCGTGTTTGGGCTGGAGTAGTACTAGGATGGGTGACCTATCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACACACAGGAAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTCTTAGAGCCTCAGAAAAATAATGCACCGACCGTCGGATGAGGGTGAGGTCCAATGGGCC

Leavenworthia alabamica (v1.0)

ID:

LA_C30781_LTR-Cassandra_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

136

Start:

1  

End:

136

Strand:

+

>LA_C30781_LTR-Cassandra_82

TGAGGCCAACGCACAAGAAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTGAGCCTCAGAAAAATAATGCACCGACTGTCGGACGAGGGTGAGGTCCAATGGATCTAGAGAGGACGTGGAGGTCCA

Leavenworthia alabamica (v1.0)

ID:

LA_C30873_LTR-Cassandra_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

160

Start:

1698  

End:

1857

Strand:

+

>LA_C30873_LTR-Cassandra_83

TTAAGACATTTGATTTGGCTACCTATGTAACCAAAGTGCACTTATCTTTTCGGTCAACCACTTCTTCAGAACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATTGGTGATCTACAACGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAA

Leavenworthia alabamica (v1.0)

ID:

LA_C30993_LTR-Cassandra_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

176

Start:

55  

End:

230

Strand:

+

>LA_C30993_LTR-Cassandra_84

TGTAACATCCCATGTTCTGGTATGGTGGTGCATGTGAAGAGGCTTAAAGCATTTGATTTGGCTACCTCTGTCACCAAAGTGCACTTATCTTTTCGGTCAACCACTGCTTCAGAACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATGTGTGACCTACCAGGAAGTGA

Leavenworthia alabamica (v1.0)

ID:

LA_C31123_LTR-Cassandra_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

138

Start:

954  

End:

1091

Strand:

-

>LA_C31123_LTR-Cassandra_85

CCCACACACGCTTAACTACAAAGTTTTGAAGGGATGGTTGACCAGAAAAGTAAATGCATTTTGGTGACATAGATAGCCAAATCAAAAATTTTAACCTCTAATCTCATACACCACCATATATTAGAAACTGGGGTCTTA

Leavenworthia alabamica (v1.0)

ID:

LA_C31563_LTR-Cassandra_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

217

Start:

1691  

End:

1907

Strand:

-

>LA_C31563_LTR-Cassandra_86

GACCCCATGTCCTCTCTAGGCCCATTGGGCCTCACCCTCGTCCGACGGTCGGTGCATTATTTTTCTGAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACCAATAATCACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAGAGTTCT

Leavenworthia alabamica (v1.0)

ID:

LA_C3257_LTR-Cassandra_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

169

Start:

38  

End:

206

Strand:

+

>LA_C3257_LTR-Cassandra_87

TGTAACATCCCAAGTTCTGGTATGGTGGTGCATGAGAAGAGGCTTAAGACATTTGATTTGGCTACCTATATCACCAAAGTGCACTTAACTTTTCGGTCAACCGCTCCTTCAGAACTCTACAATTAAGCGTACTTAGGCTGGAGTAGTACTAGGATGGGTGACCTACCGG

Leavenworthia alabamica (v1.0)

ID:

LA_C32721_LTR-Cassandra_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

288

Start:

1  

End:

288

Strand:

-

>LA_C32721_LTR-Cassandra_88

GTCCGACGGTCGGTGCATTATTTTTTGGAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACTGACAATCACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAGAGTTCTGAAGGATTGGTAGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATGTCTTAAGCCTCTTCTCATGCACCACCATACCAGAACTTGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C32887_LTR-Cassandra_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

317

Start:

1  

End:

317

Strand:

-

>LA_C32887_LTR-Cassandra_89

CCTTTCTAGGCCCATTGGGCCTCACCCTCGTCCGACGGTCGGTGCATTATTTTTCTGAGGCTCTAAGAGTTTTTTACTGTCCCTACAAATCACCACATGATCTTTCTCTGTGCGTTGGCCTCACTTACACAGTACTGACAATCACTTCCCGGTAGATCACCCATCCTATTACTACTCCAGCCCAAACACGCTTAACTGCAGAGTTCTGAAGGAGTGGTTGACCGAAAAGATAAGTGCACTTTGGTGACATTGGTAGTCAAATCAAATGTTTTAAGCCTCTTCTCATGCACCACCATACCAGAACATGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C33161_LTR-Cassandra_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

223

Start:

734  

End:

956

Strand:

+

>LA_C33161_LTR-Cassandra_90

TGAGAAGAGGCTTAAGATATTTGATTTGGATACCTATATCACCAAAGTGCACTTATCTTTTCGGTCAACCACTCATTCAGTACTCTGCAGTTAAGCGTGCTTGGGTTGGATTAGTACTAGGATGGGTGATCTACCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACGCACAAGGAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTA

Leavenworthia alabamica (v1.0)

ID:

LA_C33435_LTR-Cassandra_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

279

Start:

750  

End:

1028

Strand:

+

>LA_C33435_LTR-Cassandra_91

TGTAACATCAGTGGTTTATGGTATGCTAGCCGGTGCATGAGATGAGATGAGAATTTAAGATATTTGATTTGATTATTTATGTCACCAAAATACACTTATCTTTTCGGTCAATCATTTCATCATAATGCTAGAGTAATACTAGAATGGTGACCAACTGGAAGTGTTTGTCGGTACTCTGTAAGTAAGACCAACATACATAAAAAGATCATGTAGTAATTTTTAAGAGCAATAAACAAGTCTTTAAGACGCATAAAAATAATGCACTGACCGTCGCAGGAG

Leavenworthia alabamica (v1.0)

ID:

LA_C35073_LTR-Cassandra_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

335

Start:

1390  

End:

1724

Strand:

-

>LA_C35073_LTR-Cassandra_92

TGTAACACCGTGACCGCGACCATTCACGAGGTCCTACGCCCTCTCTAGGTATGTGGAACCCACTCTCAACTGAAGATTGGTACACTATCTTGGAAGTCTCAAGTATTTGTTTATTGTCCCTACAAATCATCACATGATTTTCCTCGTGTTTTGGCCTCACTCACACAGTACTTGAAATGACTGTCCGATAGGACACTCATCCTAGTACTACTTCAACCCAAGCATGTTTAACTGTGGAGTTATGTCAAATGGTTGACGGCAAAGATAAGTTCAGTTTGTTGAAATAGTTAGCCCAATCAAGTATATGAGGAGCTTAGTATGCACCACCATATACC

Leavenworthia alabamica (v1.0)

ID:

LA_C35073_LTR-Cassandra_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

1913  

End:

2173

Strand:

-

>LA_C35073_LTR-Cassandra_93

TGGGCTCCATGTCCTCTATAGGCGTGTGGGCTCCACCCTCGTACGATGATCGGTCTAAAGACTTGTTTACTTCCCTATAAATCAGTGCATGATCTTTTTCCATGTTTTAACTTCATTCACACGGTATCAATAATCACTTCCTGGTTGGTCACCCATCATAGTACTATTCCTTCATAAGAACACATCATAAGCATACATCACCCATCATAGGAAACATATTATTTATTGAAAAGATAAGTGAAATTTTCTGACATAGGTAGC

Leavenworthia alabamica (v1.0)

ID:

LA_C35075_LTR-Cassandra_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

302

Start:

5  

End:

306

Strand:

-

>LA_C35075_LTR-Cassandra_94

TGGGCCTCAACCTCGTCCGACGGTCGGTGCATTATTTTTCTGAGGCTCTAAGACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACCGACAATCACTTCCCAGTAGGTCACCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAGATTTCTGAAGGAGTGGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATGTCTTAAACCTTTTCTCATGCACCACCATACTAGATCATGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C35493_LTR-Cassandra_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

295

Start:

1849  

End:

2143

Strand:

-

>LA_C35493_LTR-Cassandra_95

ACCTTCATCTGACGGGCGGTGCATTATTTTTCTGAGACTCTAAGACTTGTTTACTGTTTCTACAAATCCCCACATGATCTTTCTCTGTGCGTTGGCCTCACTTACACAGTACCGACAATCACTACCGGTAGGTCACCCATCCTAGTACTACTCCAGCCTAAGCACACTTAACTGCAGAGTTCCGAAGAAATGGTTGACCGAAAAGACAAGAGCACTTTGGTAATATAAATAATCAAATCAAATGTCTTAAGCCTATTCTCATGCACCACTATATACCAGAATCAAGAATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C36189_LTR-Cassandra_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

2062  

End:

2322

Strand:

-

>LA_C36189_LTR-Cassandra_96

CCAAAAGGCCTCCACATCCTCTTTAGGCCCATTGGGCCTCATCCTCGTCCGACGGTCGGTGCATTATTTTTCTGAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCATGTGTGTTGGCCTCACTTACACAATACCGACAATCACTTCCAGGTAGGTCACCCATCCTAGTACTACTCCAGCCAAAGCACGCTTAACTGCAGAGTTCTGAAGGAGTGGTTGACCGAAAAGATAAGTGCACTTTGG

Leavenworthia alabamica (v1.0)

ID:

LA_C36313_LTR-Cassandra_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

323

Start:

1248  

End:

1570

Strand:

-

>LA_C36313_LTR-Cassandra_97

TGAGCCTCCACGTCATCTCTAGGTCCATTAGGCCTAACTATCGTCTGACGGCTGGTGTTTTTTTTTGAGGCTCTAAGACATATTTAATTATCCAACAAATCACCATATGATCTTTTTTTGTGCGTTGGCATAACTTATATAATATCGATAATCACTTTCCGGTATGTTATCCATCCTAGTACTTCTCTAGCATAAGCACACTTAACTGCAGAGTTCTAAAAAGATGATTAACCAAAAATATAAGTACGCTTTGGTGATATAGGTAGTTAAATCAAATTTTTTAATCTCATGCACTATCATATACAAAAAATCAGGATATTGCA

Leavenworthia alabamica (v1.0)

ID:

LA_C36313_LTR-Cassandra_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

271

Start:

1772  

End:

2042

Strand:

-

>LA_C36313_LTR-Cassandra_98

CCTATGAGTCTCTACGTCATCTCTAGGTCCATTGGATCTCACCATGGTCCTATGGCCGGTATATTATTTTTTTGAGGTTCTAAAACTTGTTTACTTATCCTACAAATCACCATATAATTTTTTTTATATGTTGGTCTTAGTTACACAGTACCGACAATCACGTTTAACTGCAGAGCTCTGAAGAGATGGTTAACCGAAAAGATAACTGCACTTTGGTTATATAGATAGCAAAATCAAATCCCTTAAGATCTCATCTCATGCACCACTATAT

Leavenworthia alabamica (v1.0)

ID:

LA_C36541_LTR-Cassandra_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

148

Start:

249  

End:

396

Strand:

-

>LA_C36541_LTR-Cassandra_99

ACAACTCTAGCATAAGATTGCTTTACTGCAGAGTTCTGAAGAGATGGTTGACCAAAAAGATAAGTGTGTTTTAGTGATTTAGGTAGTCAAATCAAATCTTTTAATCTCTTATCACATGCAGTACTATACCAGAATCAACAATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C36555_LTR-Cassandra_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

325

Start:

3  

End:

327

Strand:

-

>LA_C36555_LTR-Cassandra_100

CTCCACGTCCTTTCTAGGCCCATTGGGCCTCACCCTCGTACGACGGTCGGTGCATTATTTTTCTGAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTATGCTTTGGCCTCACTTACACAGTACCGACAATCACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAGAGTTCTGAAAGAGTGGTTGACCGAAAAGATAAGTGCACTTTGGTAACATAGGTAGCCAAATCAAATCTCTTAAGCCTTTTCTCATGCACCACTATACCAGATCATGGGATGTTACA