ID Class Order Superfamily Length Start End Strand View
LA_C26667_LTR-Cassandra_61 RetrotransposonsLTRLTR-Cassandra26112721532+
LA_C26783_LTR-Cassandra_62 RetrotransposonsLTRLTR-Cassandra332642973+
LA_C26783_LTR-Cassandra_63 RetrotransposonsLTRLTR-Cassandra33311481480+
LA_C27027_LTR-Cassandra_64 RetrotransposonsLTRLTR-Cassandra22365287+
LA_C27443_LTR-Cassandra_65 RetrotransposonsLTRLTR-Cassandra2211221+
LA_C27453_LTR-Cassandra_66 RetrotransposonsLTRLTR-Cassandra99606704-
LA_C27599_LTR-Cassandra_67 RetrotransposonsLTRLTR-Cassandra26213241585+
LA_C2841_LTR-Cassandra_68 RetrotransposonsLTRLTR-Cassandra1945198-
LA_C28749_LTR-Cassandra_69 RetrotransposonsLTRLTR-Cassandra259288546-
LA_C28791_LTR-Cassandra_70 RetrotransposonsLTRLTR-Cassandra3081308-
LA_C28791_LTR-Cassandra_71 RetrotransposonsLTRLTR-Cassandra107310416-
LA_C28965_LTR-Cassandra_72 RetrotransposonsLTRLTR-Cassandra28714091695+
LA_C29169_LTR-Cassandra_73 RetrotransposonsLTRLTR-Cassandra33610861421+
LA_C29239_LTR-Cassandra_74 RetrotransposonsLTRLTR-Cassandra26114274-
LA_C29251_LTR-Cassandra_75 RetrotransposonsLTRLTR-Cassandra1301130-
LA_C29505_LTR-Cassandra_76 RetrotransposonsLTRLTR-Cassandra32814071734+
LA_C29525_LTR-Cassandra_77 RetrotransposonsLTRLTR-Cassandra1451145-
LA_C29609_LTR-Cassandra_78 RetrotransposonsLTRLTR-Cassandra33475408-
LA_C2991_LTR-Cassandra_79 RetrotransposonsLTRLTR-Cassandra16834201-
LA_C30071_LTR-Cassandra_80 RetrotransposonsLTRLTR-Cassandra10713801486+

< 4 5 6 7 8 > Total 70


Leavenworthia alabamica (v1.0)

ID:

LA_C26667_LTR-Cassandra_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

1272  

End:

1532

Strand:

+

>LA_C26667_LTR-Cassandra_61

TGTAACATCCCATGATCTGGTATGGTGGTGCATGAGAAGAGGCTTAAAACATTTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACTACTCCTTCAGAACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATGGGTGACCTACCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGACAACGCGCAGGGAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTGAGCCTC

Leavenworthia alabamica (v1.0)

ID:

LA_C26783_LTR-Cassandra_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

332

Start:

642  

End:

973

Strand:

+

>LA_C26783_LTR-Cassandra_62

TGTAACATCCCAAGTTCTGATATGGTGGTGCATGAGAAGAGACTTAAGACATTTGATTTGGTTGCCTATGTCATCAAAGTGCACTTATATTTTCGGTTAACCACTCATTCATAACTCTGCAGTTAAGCGTGTTTGGGCTGGAGGAGTACTAGAATGGGTGACCTACCGGGAAGTGATTATCGGTACTGTATATGTGAGGCCAATATACATGAAAAGATCATGTGGTGACTTTTAGGGACAGTAAACAAGTCTTAGAGTCTCAGAAAAAATGCACTGACTGTTGGACGAGGGTGATGCCCAATGGGCCTAGAGAGAATGTGGAGACCCAATGG

Leavenworthia alabamica (v1.0)

ID:

LA_C26783_LTR-Cassandra_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

333

Start:

1148  

End:

1480

Strand:

+

>LA_C26783_LTR-Cassandra_63

TGTAACATCCCAAGTTTTGGTATGGTGGTACATGAGAAGAGGCTTAAAAGATTTGATCTGACTACTATGTCACCAAAGTGCATTTATCTTTTCGGTCAACCACACCTTCAGAACTCTGTAGTTAAGCGTGCTTGGGCTGGAATAGTACTAGGATGGGTGACCTACTAGGAAGTGATTGTCGGTACTGTGTAAGTGAGACCAACACACAGAAAAATATCATGTGGTGATTTGTAGAGATAGTAAACAAGTCTTAGAGTCTCAGAAAAGTAATGCACCGACCGTCAGGCGAGGGTGAGGCCCAATGAGCCTAGAGAAGACGTGGAGGCCCATGGG

Leavenworthia alabamica (v1.0)

ID:

LA_C27027_LTR-Cassandra_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

223

Start:

65  

End:

287

Strand:

+

>LA_C27027_LTR-Cassandra_64

TATCATTTTCGGTCAACCACTCCTTCAGAACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATGGGTGACCTACCGCGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACACACAGGGAATGATCCTGTGGTGATTTTTAGGGACAGTAAACAAGTTCTTGAGCCTCAGAAAAATAATGCACCGGCCGTCGGACGAGGGTGAGGCCCAATGGG

Leavenworthia alabamica (v1.0)

ID:

LA_C27443_LTR-Cassandra_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

221

Start:

1  

End:

221

Strand:

+

>LA_C27443_LTR-Cassandra_65

ACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATGTGTGACCTATCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACACACAGGGAAAGATCATGTGGTGATTTGTAGGGACAACAAACAAGTCCTAGAGCTTCATAAAAATAATGCACCGACCGTCGGACGAGGGTGAGACCCATTGGGCCTAGAGAGGACGTGGAGGCCCATGGG

Leavenworthia alabamica (v1.0)

ID:

LA_C27453_LTR-Cassandra_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

99

Start:

606  

End:

704

Strand:

-

>LA_C27453_LTR-Cassandra_66

TTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATGTCTTAAGCCTCTTCTCATGCACCACCATACCAGAACATTGGATGTTAC

Leavenworthia alabamica (v1.0)

ID:

LA_C27599_LTR-Cassandra_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

262

Start:

1324  

End:

1585

Strand:

+

>LA_C27599_LTR-Cassandra_67

TGTAACATCCCATGATCTGGTATGGTGGTGCATGAGAAAAGGCTTAAGAGATTTGATTTGGCTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACCACTCCTTCAGAACTCTGCAGTTAAGCGTGCTTGGGCTGGAGTAGTACTAGGATGGGTGACCTACCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACGCACAGGGAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTCTTAGAGCCTCC

Leavenworthia alabamica (v1.0)

ID:

LA_C2841_LTR-Cassandra_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

194

Start:

5  

End:

198

Strand:

-

>LA_C2841_LTR-Cassandra_68

GAGGCTCTAAGACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACTGACAATCACTTCCCAGTAGGTCACCCGTCCTAGTACTACTCCAGCTCAAGCACGTTTAACTTTAGAGTTCTGAAAGAATGATTGACCTAAAAGATAAGTGCTATTTGGTGACAT

Leavenworthia alabamica (v1.0)

ID:

LA_C28749_LTR-Cassandra_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

259

Start:

288  

End:

546

Strand:

-

>LA_C28749_LTR-Cassandra_69

GAGGCTCTAAGACTTGTTTACTGTCTCTACAAATAACCACATGATCTTTTCCTGTGCGTTGGCCTCACTTACACAATACCGACACTTACTTTGCGGTAGGTCACCTATCCTAGTACTACTACAGTCCAAGCACGCTTAACTGCAGAATTCTTAAGGAATGGTTGACCGAAAAGATAAATGCACTTTGGTGACATAGGTAGCCAAATCAAATGTATTAAGCCTCTTTTCATGCACCACCACTAGAACCTCGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C28791_LTR-Cassandra_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

308

Start:

1  

End:

308

Strand:

-

>LA_C28791_LTR-Cassandra_70

GCCCATTGGAGCTCACCCTCGTCCGACGGTCGGTGCATTATTTTTCTGAGGCTCAAAAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTTTCTGTGCGTTGGCCTCACTTACACAGTACCGACAATCACTTTCCGGTAGGTCATCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAAAGTTCTGAAGGAGTGTTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGATAGCCAAATCAAATGTCTTAAACCTCTTCTCATGTACCACCATACCAGAACTTGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C28791_LTR-Cassandra_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

310  

End:

416

Strand:

-

>LA_C28791_LTR-Cassandra_71

TCACCCCCACTCAAAGAACACAACGTCCTCGTTGTGGACTAAGACCGTTACCCTGATGGTGTGAGCCCTCTTGACTCCACACTCATCTGGGTTCGGCTCTGATACCA

Leavenworthia alabamica (v1.0)

ID:

LA_C28965_LTR-Cassandra_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

287

Start:

1409  

End:

1695

Strand:

+

>LA_C28965_LTR-Cassandra_72

TGTAACATCCCATGTTCTGCTATGGTGGTGCATGAGAAGAGGTTTAAGATATTTGATTTGACTACCTATGTCACCAAAGTGCACTTATCTTTTCGGTCAACCACTCATTCAGAACTCTGCAGTTAAGCGTGTTTGGGCTGGAGTAGTAATAGGATGGGTGACCTACCGGGAAGTGATTGTCGGTACTGTGTAAGTGAGGCCAACACACATGAAAAGATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTGAGCCTCAGAAAATAATGCACCGACCGTCGGAC

Leavenworthia alabamica (v1.0)

ID:

LA_C29169_LTR-Cassandra_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

336

Start:

1086  

End:

1421

Strand:

+

>LA_C29169_LTR-Cassandra_73

TGTAACATCCCAGGTTCTGGTATGGTGATATATGAGAAGAGGCCTAAGACATTTGATTTGGCTACCTATATCACTAAAGTGCATTTATCTTTTTGGTCAATCTCATTCCTTCAGAATTCTGCAGTTAAGCGTCTTTGGGCTGGAGTAGTATTATGATGGGTGACCTACCGGGAAATTATTGTCGGTACTGTGTAAGTGAGGCTAATGCACATGGAAAGATCATGTGGTGATCTGTAGGGATAATAAACAAGTCTTAGTGCCGCTGAAAAATAATGCACTGACCGTCGGATGATGGTGAGGCCCAATGGGCCTAGAGAAGATGTGGAGACCCAATGG

Leavenworthia alabamica (v1.0)

ID:

LA_C29239_LTR-Cassandra_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

261

Start:

14  

End:

274

Strand:

-

>LA_C29239_LTR-Cassandra_74

GAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACCGACAATCACTTCCCGGTAGGTCACCCATCCTAGTACTACTCCAGCCCAAGCACGCTTAACTGCAGAGTTCTGAAGGAGTGGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATGTCTTAAGCCTCTTCTCATGCACCACCATATCATATCTTGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C29251_LTR-Cassandra_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

130

Start:

1  

End:

130

Strand:

-

>LA_C29251_LTR-Cassandra_75

TTACTTCCCGGTAGGTCACCCATCCTAGTACTACTGCAGCCCAAGCATGCTTAATTGCAGAGTTCTAAAGGAATGGTTAACCGAAAAGATAAGTGCATTTTGATGATATAAGTAGCCAAATCACTTCCTT

Leavenworthia alabamica (v1.0)

ID:

LA_C29505_LTR-Cassandra_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

328

Start:

1407  

End:

1734

Strand:

+

>LA_C29505_LTR-Cassandra_76

TGTAATATCGTATTTCTGGTACGGTGGTGTATGAGAAGAGACTTAAGACATTTGATTTGGTTACCTATATCACTAAAGTGCACTTATCTTTTCGGTCAACCACTCATTCAGAACTCTGCAGTTAAACGTGATTGGTCTGGATAGTAGTAAGATGGGTGATCTATCGGAAAGTGATTGTCGGTACTGTGTAAGTGAGCCAACGCACATGGAAATATCATGTGGTGATTTGTAGGGACAGTAAACAAGTTCTTGAGCCTCAGAAAAATAGTGCACCGATCGTCGGACGAGAGTGAAGTCCATTGGGCCCTATAGAGGACGTGGAGGCCCA

Leavenworthia alabamica (v1.0)

ID:

LA_C29525_LTR-Cassandra_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

145

Start:

1  

End:

145

Strand:

-

>LA_C29525_LTR-Cassandra_77

TACTCCAGCCCAAGCACGCTTAACTGCAGAGTTCTGAAGGAGTGGTTGACCGAAAAGATAAGTGCACTTTGGTGACATAGGTAGCCAAATCAAATGTTTTAAGCCTCTTCTCATGCACCACCATACCAGAACTTGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C29609_LTR-Cassandra_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

334

Start:

75  

End:

408

Strand:

-

>LA_C29609_LTR-Cassandra_78

CCATTGGGCCTCCACGTCCTCTCTAGGCCCATTGGGTCTCACCCTCATCCAACGGTCGGTGCATTATTTTTCTGAGGCTCAAGAACTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGTACCGACAATCACTTCCCAGTAGGTCACCCATCCTAGTACTACTCCAACCCAAGCACGCTTAACTGCAGAGTTTTGAAGGAGTGGTTGACCAAAAAGATAAGTGCACTTTGGTGACATAAGTAGCCAAATAAAATACCTTAAGCCTCTTCTCATGCACCACCATACCAGAACATGGGATGTTACA

Leavenworthia alabamica (v1.0)

ID:

LA_C2991_LTR-Cassandra_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

168

Start:

34  

End:

201

Strand:

-

>LA_C2991_LTR-Cassandra_79

ACCCCATGACCTCTCTAGGCCCATTGGCCTCCACGTCCTCTCTAGGCCATTGGGTCTCACCCTCGTCGGACGGCCGGTGCATTATTTTTCTTAGGCTCTAAGATTTGTTTACTGTCCCTACAAATCACCACATGATCTTTCCCTGTGCGTTGGCCTCACTTACACAGT

Leavenworthia alabamica (v1.0)

ID:

LA_C30071_LTR-Cassandra_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Cassandra

Length:

107

Start:

1380  

End:

1486

Strand:

+

>LA_C30071_LTR-Cassandra_80

TGGTATCAGAGCCGAGCCCATATGAGTGTGGAGTCAAGAGAGCTCACACCATCAGGGTAACGGTCTTGGCCCACAACGAGGACGTTGTGTTCTTTGAGTGGGGGTGA