ID Class Order Superfamily Length Start End Strand View
scaffold_1_LTR-Copia_81 RetrotransposonsLTRLTR-Copia2671232286812323134+
scaffold_1_LTR-Copia_82 RetrotransposonsLTRLTR-Copia6421236173012362371+
scaffold_1_LTR-Copia_83 RetrotransposonsLTRLTR-Copia901247166912471758+
scaffold_1_LTR-Copia_84 RetrotransposonsLTRLTR-Copia4631252300012523462+
scaffold_1_LTR-Copia_85 RetrotransposonsLTRLTR-Copia17641252346312525226+
scaffold_1_LTR-Copia_86 RetrotransposonsLTRLTR-Copia24241252524812527671+
scaffold_1_LTR-Copia_87 RetrotransposonsLTRLTR-Copia2521252767212527923-
scaffold_1_LTR-Copia_88 RetrotransposonsLTRLTR-Copia991252864512528743-
scaffold_1_LTR-Copia_89 RetrotransposonsLTRLTR-Copia7161252899912529714+
scaffold_1_LTR-Copia_90 RetrotransposonsLTRLTR-Copia5451253051412531058+
scaffold_1_LTR-Copia_91 RetrotransposonsLTRLTR-Copia1371253136512531501+
scaffold_1_LTR-Copia_92 RetrotransposonsLTRLTR-Copia4231253188912532311+
scaffold_1_LTR-Copia_93 RetrotransposonsLTRLTR-Copia2931264568312645975+
scaffold_1_LTR-Copia_94 RetrotransposonsLTRLTR-Copia2311264632312646553+
scaffold_1_LTR-Copia_95 RetrotransposonsLTRLTR-Copia5941264671512647308+
scaffold_1_LTR-Copia_96 RetrotransposonsLTRLTR-Copia15281264773512649262-
scaffold_1_LTR-Copia_97 RetrotransposonsLTRLTR-Copia8861264953512650420-
scaffold_1_LTR-Copia_98 RetrotransposonsLTRLTR-Copia2391265116112651399-
scaffold_1_LTR-Copia_99 RetrotransposonsLTRLTR-Copia1511276373112763881+
scaffold_1_LTR-Copia_100 RetrotransposonsLTRLTR-Copia44481276393312768380+

< 5 6 7 8 9 > Total 176


Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

267

Start:

12322868  

End:

12323134

Strand:

+

>scaffold_1_LTR-Copia_81

AGAAGAGTGAAACACAAGATCAAAGGTTGGAAAAACTTTGGTGAAAACAAAAGAAACAAAACAAAAATGCCTATTTGTTTATATAATATCTTAGCCTAGAATAAGAATGAACACTTTGATTGTCATATCCTACAAAAGATTTAGTATAATACAAAGCTTGAGTGAAAAGTAGAAATACTTTTAAAAGAAAATGCTTCTGAATACGATTCGATCATTATCTAACTTCACTATAAGTTACCATCCCGGAACTACACCGAATTTACAACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

642

Start:

12361730  

End:

12362371

Strand:

+

>scaffold_1_LTR-Copia_82

TGAAGATGCAGTTCCAGAATAGCTTGATGTGAAGATCAGGAAGCTGCATCTGTTCAGACGCCTGAGATCACATCAGACGCCTGGGATCACATCAGACACTTGAAGTTGATGACATGGAGTCGTAGGATGACGTGGCAAAGCTTAAGTGGATGGAGTGACGTGCTAAGGAAGATTTCTTGCTTGGCAGCAAAGATAGAGACGAATTGCGTGTGAAGATATTGTGAATATTCTTCACATCAAATAAGGAAAGGATGAGCTTGACAAGCAAGCATATTCCGTTTCGGTGAGATCCTCGAAGATCCTAGGGTTAGGGTTTCGAGTAGTTAGTATAAATAGTCTAGGGTTGGCCACGAGCCACTTTGAACACTTTAGACTCTTTGTACGTGATTGTAAACTTCGAAGCTAGCAAAACAAAAAGCTGAGAAGGTGAGTGTTTATTTTCTCTTGGGACTACACGGGTGTAGGAGAGATAGGTTTTAGTGCTCGTTCTTTAGTCGGGTTCAATTCTATTGGGAGGAATAGATTGAGTAAGAGCCGAGACAAAATTGTATCCTAGGAAAAGATAAATTTTGTTAATAAAGATCGAAGGAAAAAGCGTTTGCTTGGCGCGTTCCAAGCGTAACTGTCTGTGTTTCTCTATAC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

90

Start:

12471669  

End:

12471758

Strand:

+

>scaffold_1_LTR-Copia_83

ATTTGTGTTCTTATGCTAGTGAATGATTCTGGACTTGGCCCCGGAGATATAGGTTATCCGAACCCCATTAACAAATCTCTCGTGTCATCT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

463

Start:

12523000  

End:

12523462

Strand:

+

>scaffold_1_LTR-Copia_84

AGAAGTGTCTAGAAGCATCTAGAAGCGTGAAGACTTTACTTTTATAAGAATAAAAGTAAATTAGAAGAGTTGGATAATTTCCTAATCCATAAAGAAAAAGGAAAATATCTTAAAGCCTATTTAGAAGTGGAATAGGAATTTCCTGTTGTATGGAGATGTCCTAGTTCTATAAATAGGGAGCCAAGGCTTGAAGAAAGCTTGGCACAATTAAGAGAAAGAGATCTTGCAATAAGCTTTAACTTGAGAGAAAAGAGAGTTGAGAGCTTATCGAGTGCATAAGGTTTCTTTGAGTGATTCTAAGATCAAGTGTATGATCTTAGAAAGAAGGTCTTTGAGAGATTAGGAATTTGTTTAGGGAAAAACCCATTGTAAACAGAATTTCTATATATCAAAGATAGCGTTTTGAGAAACCCAGTTTTTACTATTTTGATCTAGTTCAATTCGTAAGACTCTTGCTTTTTCA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1764

Start:

12523463  

End:

12525226

Strand:

+

>scaffold_1_LTR-Copia_85

ATTGGTATCAGAGCAACACTTGTTCGATATACTACAGGTGAGATCTTGAGGACACAATGGAGAGTTACGGAGATCTAGTCAATAGTAACAAGGTTATCTTGGATGATGGCAACTATGGTTTTTGGAAATCCAGAATCAAATCGATCATTGGAGGTATCGACCGTTTAGCATGGAAGGCTGTTCTGGAAAAGTGGGTCGAACCGACTATCACCAATGACGAAGGAGATAAGATACCAAAACCAGAAAGTGATTGGACTGATGAAGAACAAAAAAAAATCCAAGTATAATTCAAGAGCTCTCACGGCAATACATTGTAGTGTTGGAAGAAAGCAGTTTGAATTAATACAAGGATGTGAGACAGCGAAGGAGGCCTGGGATCTCTTACAAGCACACTATGAGGGAACCTCTAAAGTTCAAAACTCAAGAAAAGACATGTTAGCTTCACGTTTTGAAAATCTCAAGATGGAAGAATATGAGTCAATCTCAGACTTTACTTCAAAATTGAGCACTCTAGCACAAGAAGCAGTAACACTTGGAAAGAAATACAAAGATCAGAAACTGGTGAAGAAATTCCTAAGATGTCTACCTGCTAGATTCATGGCATACAAAACTGCTCTAACAGTTTCACATAAGACAGAGGATCTTAGTTTTGCAGAAGTTGTTGGGATGCTGCAAGCACATGAATTGGAACTAGGAGGGGTAAAGAAAACAAAAGGAATTGCTCTAGCTGCTAAAGAAGACCTGACTCAGACAGAGGATGACGATCCAGTTGGACTTCTTGTTAGAAGGTTTGATCGTGCTCTAAAGAAGTATGAACAAGGTCAAGGATCAGGACAGAAACGAACAAATTTCAGAAGATATTCTGAAGAAACCAAAGGATCTAAGAAATCTGAGATGTAGTGTCATGAGTGTAAGGGAATGGGACATTTTGCTCGAGAATGTCCAACCATCAAGCTTCGGGAGGCTAAGTGTGTTCTATGCAAAGGAGTTGGTCATACTCAAGACAATTGTGTGAATCGCAAAGAGAAATCAATGATAAGCATGGAAGACGAATCAGATAGTGATGAAGAAGAAATTCTAAATCTGGTTGCTATGATTGGAATCACAGAATTTGAAGATGGAGAAGAAGTGACTGACTCAGAGAATGAAGAAGAAGTTGATATAGTTCAGAACTACAAAGAAGTGCGTGATACTCTTGTTCATATGGGAAAAGAAAATCAGAATTTGCTAAAAGAGAAAATGCGCCTAGAGGCCCTAGTGTTAAAACTGCAGAATGAGTTGGAAGATGAAAAGAAGATTGCCAAAGATTGTGTACTAATGACAAAAGAGAAGTTATTACTATCTGCTAAAGTTGATGATCTAGAAACTCAATTAACTGCAGAAAAGAAGGCAAAATCTGAATTACAGGCTGAACTAGACCAACAGTACAGAAAGATACACATGTTTGCAGGAACTAAGCAGCTTGATAAAATTCTGAGCTATGGAAGAACTGAGAAGACACATCAAGGACTTGGCTTTACTGGAGCAAATAGCTGGAGCACATCTGCAACCAAGTTTGTATCTGCTGGAGTAGATCAGGTGAAACCTGAAGTAATGAGCACTAATAATACCAAATATACAGGATGCTTCTTTTGTGGAAGGTTAGGACATTATAAGGCATACTGTTACAAGTACTGGGAAAAGGTTCGAAGACTAAAGAATCTTGGAAAGTATTTTTGGAATGGGTTCAAACGTCAAATATGGATTAAAAATCTGATCTATATC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

2424

Start:

12525248  

End:

12527671

Strand:

+

>scaffold_1_LTR-Copia_86

CAGACCTAGGTTTTCGATGCAACATGGCCATGCTTACAGAAGAAGAAGAAGAAATTTTACCTTGGTATTTTGATAGTGGCTGCTCTCGACATATGACAGGATCACAGGAAAATATGGAAGAGATAAAAAAACTGAGAGGCGGCAATGTTACCTTTGGTGATGGAAGGAAAGTAATCATACAGGGCAAAGGTAAAACATGTAGTGATCAATTGCCAAAACTTGATAATGTGTATCTTGTATAAGGGCTGAAGGCAAACTTGATCAGTATAAGTCAACTATGTGATGAAGGAATGTCAGTTCTGTTCACAAAAATTGACTGTAAGGCCATGGATGAAGATGGAAAGACCAAAATGCATGGGATAAGATCAGGAAGCAACTGTTACATGTGGGAGAAAAATGCTGAAAATTGCTTCAGTGCAAGAGACAACCTGAATTTATGGCATCAAAGGCTAGGGCACATCAATGTCAGGAATTTAACTACTCTTGTGAACAAGGAAATCATCCGAGGAGTACCTCAACTCAAAGGTGAAGATAAGATTATATGTGGACCATGCAATCAAGGAAAGCAAGTTAAAATTCAGCACAAAAGGGTTCCAGATGTGCAGTCTAAAGTTGTTCTAGATCTGATCATATGGACTTAATGGGGCCAATGCAAGTAGAAAGCTTGTCAGGAAAGAAGTACGTTTTTGTGTTAGTTGATGACTACTCACGATACACTTGGGTTCGGTTCATTCAAGAAAAGTCAGAAACTGTGAACAGCTTCAGGATTCTAGAACTGCAACTTATCAATGAAAAAGGATCTATCAAGAAGATAAGAAGTGATCATGGAGGAGAATTTCAGAATGAATCAATGAAGGAATTTTGTGAAAGTCATGGTATAGTGCATCAATTCTCAGCTCCCAGAACTCCACAACAAAACATTGTTGTAGAAAGAAAGAATCGGACATTACAAGAGATGGCGCGAGCTATGATACATGGAAATCAAGTACCAAAGAGATTTTGGGCTGAAGCTTTGAACACGGCATGCTACATAGTAAATCGTCTATATATCAGAAGAGAAACCTCCAAGACACCATATAAGCTATGGAAGGGCAAGACACCAAATTTGAGTTATTTTCATGTGTTTGGTTGCAGATGTTTCATTATGAACGACAAAGATTATCTAGGAAAATTTGATTCCAAAAGTGATGAAGGCATGTTTCTTGGATATTCTGAAAATAGTATGGCGTATAGAATATTCAACAAAAGATCATGTGCTGTGGTTGAATCAGTCAATGTGGTGTTTGATGATTTAGCAGGTTCAAGCAAAGGAAACCGTAAGTCAGACAGTGATTCAGAAACAGAAACACCTGGTTCAGAGGCAGAGAAGGATGAGTCAGAAACCGAGGAAACAAAGGACAATGAGTCAGAACCAGAAAACTCTCATTTAGACTTACATGGTACTCCGACAGTTCATAAGAATCATTCAGCCTCAGATATCATTGGAAAACTCACGGAAAGAAAGACCAGAGGAGTACAAATCGATTTCAAAAAACTGCATAGTAACTTTGCAATATGGGAGACAGTACAATTTGAGTGCTTTGTGTCATTCATTGAACCAAGGAATCATGTTGAGGCTCTTAAAGATGATTTCTGGATCATAGCAATGGAAGAAGAACTTGAACATTTTGAACGAAATCAAGTATGGGAGTTGATTAAAAGACCAGAAGATATCAACATCATCGGAACTAAATGGATCTTCAAAAACAAAATCGATGAAAGTGGTGTTGCAGTTCGGAATAAAGCTAGGTTGGTCGCACAAGGATATACTCAAATCGAAGGAGTTGATTTTGAAGAAACCTTTGCTCCTGTTGCACGGTTGGAATCCATCAGATTATTTCTGGAAATGGCTTGCATATTGAATTTCAAAGTGTATTAAATGGATGTGAAAAGTGCCTTTCTCAATGGTTACTTACAAGAAGAAGTTTATGTAGAACAGCCTAAAGGTTTTGAAGACTTGAATCATCCTGAGTATGTATATAAACTTAAGAAAGCACTTTATGGGTTAAAGCAAGCACCTAGAGCATGGTATGACAGATTGACAAGCTATTTAATTGACAATGGCTATACTCGTGGAAGTGTCGACAAGACTTTGTTCACGCTTGAACAAGCTGATCATATTCTGGTGGTTCAGATCTACGTCGATGATATTATCTTTGGAAGTACATCAGAATCACTTGTTAGTGGATTTGTGAAGATCATGACTCAAGAGTTTGAAATGAGTTTAGTAGGCGAGCTAAAGTACTTTTTGGGATTACAAATAACACAGTCTGATGAAGGAATATTTATCTCACAAAGCACTTATGCAAAGCAACTCTTGAAGAAATTTCAGATGGACAAGTGCAAAGAAGCTAAAACTCCCATGAGTACATCTATTAAGTTATC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

252

Start:

12527672  

End:

12527923

Strand:

-

>scaffold_1_LTR-Copia_87

TGATTACTCGAGTATTTAACCCGATAACTTAACCGAAGTAAAGTATATGCGGGATCGATCACAAGGAGCAATGGTACACTAAAGACTTTCGAGACTCGTTATCAGCTAAAGCGGAAACACTTGCTGTTTGTTTTTCAGTTTTTGTAAATAAAAATGCAAATAAAGAGATTAAACTTATGAATTAAAGACATTGGGCTGCAGGGTATTTTCAGAGAATCAATGAATAACAAATAAAAGCAATAAGGAATTCAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

99

Start:

12528645  

End:

12528743

Strand:

-

>scaffold_1_LTR-Copia_88

GGATCGATCGATCCAAGGTGAGTACCGATCGATCTATGTTCTCTGTTCAGAGCCGGGTAAACGGATCGATCGATCCATTGTGGGGACCGATCGATCGTT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

716

Start:

12528999  

End:

12529714

Strand:

+

>scaffold_1_LTR-Copia_89

ATTATCAAGAGATGAATCTGGTAAGGATGTAAGTATGAAGCAGTACAGAGGAATGATTGGAAGTCTACTGTATCTTACAGCCAGTCGACCTGATCTATGTCTGAGTGTAGGTATGTGTGCAAGATATCAAGCGAATCCTAAACAATCTCACTTGGAAGTTGTGAAGCGAATCATCAAATATGTCAAAGGCACAGTTGATTTGGGTATTTGGTACTCTAAAGGCTCGAACAAAAGTTTGGTTGGATACTGTGATGCAGACTATGCAGGAAGTGTAGTAGATCGGAAGAGCACTAGTGGTGGATGTTTTTTCTTGGGAAACAATCTCATTGCTTGGCTAAGTAAGAAGCAGAATTATGTGTCACTTTCCACTGCAGAATCTGAATATATTGCTATGGGAAGCTGCTGCACACAGTTGCTTTGGATGAAACAAATGTCAGCCGATTATGGCATGGAGTCTGGTGTACTTCAGGTCTATTGTGATAGCAAAAGTGCCATTGACATATCCAAGAATCCGGTTCAGCATTCAAGAACTAAGCACATTGATGTCAGACATCATTTTATACGAGAGCTTGTTGAGAAGAAACATGTTCTTATTGAGCATGTGGAAACAGAGGTGCAGCTTGCTGATATGTTCACAAAGGCATTGGATTTCAGTCAGTTTTCTTTTTTAAGAAATTCGATTGGAGTTTGTGCTATGTGAATCAGATTCTGTCTGA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

545

Start:

12530514  

End:

12531058

Strand:

+

>scaffold_1_LTR-Copia_90

AAGGAAGATACTTGGGGTTATTGTCAGAAGATTAAGGATGTAGGTTTAGAGGAACTTGCTTTTGAACTTGCTGATTATGTCAAAGCAATTGTATGTGAGTTTTATGCTAATCTCCATTCTGAGATGTCCCCTTCTGGTGTTCAAGTGTTTGTTCGAGGTCAGATGTTCGAGTTTTCTCCAACAGCTATTAATCGTGCATTGCTTCAGAAGCCTCTGACTAAAGCAGAACGTCGAGCAGATGCAACTGCTAATGATGTTGCAATTGATCAGGTTGCTAGAGTTCTTAGTGGAAAAGATAAATCTAACTGGAGAGGTTTAAGTGTCAAGAATTTACCTGCTGGAGTTGGTGCATTGCTTATGATTGCTGCTTGCAATTTGGTTCCATCCTCACATAAGAATCATCTTGCTGAAAAACGGGCCAGGGTAGTTTACAAAATTCTTCAAGGTATTCGGTTTGATGTAGGTCAGCTGGTCTATGAACAAGTCATGACATGGAATTCAATTCAGAATGATGATAAGCGTTGGCTGATCTTTCCGCGAGTTAT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

137

Start:

12531365  

End:

12531501

Strand:

+

>scaffold_1_LTR-Copia_91

TGCAGTTGTTGATCAATTGATTCAGAATCATCCCATGGCCAAGAAAGCTTGATTTTTGTTTTTTAACCTGTGTTGTCTCAAGCAGGGGGAGAAGAAGCATTAATCATGGGGGAGTATTGCTGAATCATGGGGGAGTA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

423

Start:

12531889  

End:

12532311

Strand:

+

>scaffold_1_LTR-Copia_92

TTTAGAAGCGTGAAGACTTTACTTTTATAAGAATAAAAGTAAATTAGAAGAGTTGGATAATTTCCTAATCCATAAAGAAAAAGGAAAATATCTTAAAGGCTATTTAGAAGTGGAATAGGAATTTCCTGTTGTATGGAGATGTCCTAGTTCTATAAATAGGGAGGCAAGGCTTGAAGAAAGCTTGGCACAATTAAGAGAAAGAGATCTTGCAATAAGCTTTAACTTGAGAGAAAAGAGAGTTGAGAGCTTATCGAGTGCATAGGGTTTCTTTGAGTGATTCTAGGATCAAGTGTATGATCTTAGAAAGAAGGTATTTGAGAGATTAGGAATTTGTTTAGGGAAAAACCCATTGTAAACAAAATTTCTATATATCAAAGATAGCGTTTTGAGAAACCCAGTTTTTACTATTTTGATCTAGTTCAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

293

Start:

12645683  

End:

12645975

Strand:

+

>scaffold_1_LTR-Copia_93

AGTACCAGGGAGATCAGAAGGTAATCACTATGAAGCTTCAAACTCTACGTCATAATTTTGAAACAATTGTGATGAAGGAGAAAGAGTCAATACAAGAGTATTTGGCAAGGGTGTCAAACATTGTGAGCCAAATGAGGTCTTATGGCGAAACTATGTCAGACGTAACTATTGTGAGGAAAGTTCTCAGAACTTTAGTTCCAAAGTTTGAATATGTTGTTCCTGCGATCATGGAAGCCAATGATCTGAGCAAATACACGTTTGATGAGATGATGAGTTCGTTGTTGTCGCATGAA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

231

Start:

12646323  

End:

12646553

Strand:

+

>scaffold_1_LTR-Copia_94

AACAGTGTGGTATTTGGACAGCGGTTGTTCTAATCATATGACAGGCATCAAGTCATTGTTTAAGGAGATAGATGAGTCGTACAAGCTGAAAGTCAAGCTTGGGGATGACAAAGAAGTTCAAGTTGAAGGAAGAGGAATCGTTTCCGTCAAAGATAGCGATGGTAATCTCAAATTCATCTATGATGTGTATTACATTCCTGATCTAGCGCAGAATCTGTTGAGTGTTGGACA

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

594

Start:

12646715  

End:

12647308

Strand:

+

>scaffold_1_LTR-Copia_95

AGAGATGTCAAGGTTGTGGCATTTACGATATGGGCATCTACACGAGAATGGGATGAAGATTCTCAGTCAGAAGAATATGGTGGTTGGATTACCACATATTGATGCTTTTGGGATGTGCGAAAGATGCATATATGGGAAACAAACGCGGAGGTCGTTTCCTGTTGGTCAGGCAAGGAGAGCAACTCAATGTCTTGAGATTGTTCATGCTGATTTGTGTGGTCCTATGCAGACTACTTCTCTTGGAGGAAGTAAGTATTTCCTGATGTTAACAGATGACTACAGCAGGATGAGCTGGGTTTATTTTTTGGTGTCTAAAGGTGAAGCATTTGAGATGTTCAAGAAGTTTAAGTCACTAGTGGAGAAACAAAGTGGGTTGTTAGTCAAGGTGTTGCGAACTGACAGAGGTGGAGAGTTCACATCTACTGAGTTCAACCAATTTTGTGAAGATGAAGGTATTCATCATGAACTTACTACAGCTTATACACCGGAGCAGAATGGTGTAGCAGAGAGGAAGAACAGGACTGTTTTAGAGATGGCGAGAAGTATGTTGAAACAAAAGAATTTGCCAAATCTGTTTTGGGCTGAAAGTGTGAG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1528

Start:

12647735  

End:

12649262

Strand:

-

>scaffold_1_LTR-Copia_96

CTCTCCCTTGATTCAAACTTGCATACTCCAAGCTTGCTCCTGAAGTACTCAAACTTGTTATTTGACAACGCCTTTGTCAGAACATCTGCACTCTGCTCGTTTGTGCTACAATACTCCAAAGTAACTGAACCTTCACTGACCAAGTCTCTTATGAAGTGTACCTTGATAGATATATGCTTTGTTCTTCCATGATACGCCGGATTCTTGCTCATTGCTATGCTTGCCTTGTTGTCACAAAATATTGTTGTAGGCTTCTTCTGCCTTTTGCTTGACATCTTCAAGAATTCTTCTTAACCAAACAGCTTGACACGCTGCTGCTGTAGCTGCTGTATACTCTGCTTCTGACGACGACAAAGCTGTAACATGCTGCTTCTTAGAACTCCAACACACCGCTCCAGAACCCAGATTGAAAACATGACCTGACGTGTTTTTTCTGTCTTGCACACAACCTGCCCAATCACTGTCTGTAAACCCAACCAACTCAAACTCTCTAACTCTGTTGTACCACAGACCATAGTCCGCTGTACCTGCAACATACCTCAACAACCTCTTAGCTGCTCCATAATGCTGCTTCGTTGGACTGTGCATAAACCTTGAAATTGCACTCACAGCAAACGAAATATCTGGTCTTGTATGAGTTAAATAGATAAGACCACCAACCAAACTTCTGAATCTTGTTGCATCCGTTTTTTCTGTTCCATCTTCCAACTGCAACTTCTCATTCACATTCATAGGAGTTTCCACCGGATTGCAATTCGTCATGTTGAACCTCTTCAACAAATCTTTTGCATACTTGTGTTGAGACACAAATATCCCATCTTCCACTTGCTTAATCTCTAAGCCCAGAAAATAATGCAGCAAACCCAAGTCTGACATTTCAAACTTCTTCATCATACTCTCCTTGAAATCAGCAACAAGTGCAGCACTCGAACCCATGTAAATCATATCATCTACATATAAACACACAATAAGGATATCACCTTCACTTTGCTTCTTTATGTAGAGAGTGTGCTCACTTTTGCTCCTTTCAAACCCAGTTTCTGCAAAAAATGAATCAATCTTGTTGTACCAAGCTCTCGGAGCTTGCTTCAGCCCATACAATGCCTTGTGTAACTTGTACACGCACCCTTCTTGGCCTTCAACCACAAAACCTTTAGGCTGATCAACATAAACCTCTTCAAGTAGCTCACCATTTAAGAAAGCTGACTTAACATCAAACTGATATATTGGCTAATTCATACTTGCACCAAACTGAAGTAAAATTCTCACTGTATCAAACCTTGCAACAGGAGAAAAGGTTTCTTCATAACCCACTCCGTACTCTTGTGCATAGCCTTTGACCACCAGTCTTGCTTTATACTTCTGAACACTACCATCTACATGATACTTTGTTCGAAATACCCACTTCACACCAATTGCGCGTTAACCTTCAGGAAGCTCAACTAACTCCCAAGTCTTACTCTTCTCTATGGACTCTATCTCTTCACCCATTGCTTTCTGCCACTCTGATTCCTCTACAGCCTCGTTG

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

886

Start:

12649535  

End:

12650420

Strand:

-

>scaffold_1_LTR-Copia_97

CCAACTCCAAACTGCATCCTCATCGAATGTGACGTTCATGCTTTCAACAATCTTCCCACTCACATGATTATACAATCGATAACCTTTGGATTGTGAACAATAACCAAGAAATATGCATTTCTCAGATTTGTCATCCAACTTTCTCCTGAGATGAATATCAACAAGAGAATATGCAACACTGCCAAAAATTCTCAAGTGACTTACTGCAGGTTTTCTGCCACACCACGCTTCAAATGGAGTTTTGTCTGCGACTGCTTTTGTTGGTGAAATGTTCAGCAGATACACTGCCGTGCTCACACTTTCAGCCCAAAACAGATTTGGCAAATTCTTCTGTTTCAACATACTTCTCGCCATCTCTACAACAGTCCTGTTCTTCCTCTCTGCTACACCATTCTGCTCTGGTGTATAAGTTGTAGTAAGCTCATGATGTATACCTTCATCTTCACAAAATTGGTTGAACTCAGTAGATGTGAACTCTCCACCTCTGTCAGTTTGCAACACCTTGACTAACAACCCACTTTGTTTCTCCACTAGTGCCTTAAACTTCTTGAACATCTCAAATGCTTCACCTTTAGACACCAAAAAATAAACGCAGCTCATCCTGCTGTAGTCATCTGTTAACATCCGGAAATACTTACTTCCTCCAAGAGAAGTAGTCTGCATAGGACCACACAAATCAGCATGAACAATCTCAAGACATTGAGTTGCTCTTCTTGCCTGACCAACAGGAAACGACATCCGCGTTTGTTTCCCATATATACATCCTTCGCACATCCCAAAAGCATCAATATGTGGTAATCCAACTACCATATTCTTCTGACTGAGAATCTTCATCCCATTCTCGTGTAGATGCCCATATCGTAAATGCCACAACCTTGACATCTCT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

239

Start:

12651161  

End:

12651399

Strand:

-

>scaffold_1_LTR-Copia_98

TTCATGCGACAACAACGAACTCATCATCTCATCAAACGTGTATTTGCTCAGATCATTGGCTTCCATGATCGCAGGAACAACATACTCAAACTTTGGAACTAAAGTTCTGAGAACTTTGCTCACAATAGTTGCGTCTGACACCGTTTCACCATAAGATCTCATTTGGCTCACAATGTTTGACACCCTTGCCAAATACTCTTGTCTTGACTCTTTCTCCTTCATCACAATTGTTTCAAAAT

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

151

Start:

12763731  

End:

12763881

Strand:

+

>scaffold_1_LTR-Copia_99

TATCAGATTAGATAACCGGTTTAATGGTTTAGTAAATTAACTTGTATAGATGCTGTATAGTAATAGTATATATACGTTGTACAGTTGATCATTTTACAATTAATGAGAATAAACAGATTAATATCTCTAACAAACTTTTCTCATCTCTCTC

Capsella rubella (v1.1)

ID:

scaffold_1_LTR-Copia_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4448

Start:

12763933  

End:

12768380

Strand:

+

>scaffold_1_LTR-Copia_100

TAATTCCGATCAGATTTCGTCGTTTTTGAGCTCGATTCTTTGTTTCCGCCGATTGTTTTGAAGATCCGATGGTGTCTGTTGCTCGTGGTATACGGAAATCGACTCGATCGAAGTCCTCGACGAGTTCCGCCGTTCGCAAGCAATCACAGTCCACCGGAAATGTTGAATCACCTCCGGATTCTCCTCCAGTTGCACCGTCTCGTGCTTCTAGAGCTTCGCGAGGTTCTCTCTCTCTTGGATCTGAAGATCCGACGCAGTCTCCGTTCTTTATGCATAGCGCTGATCATCCAGGTTTAAACATCATCTCTCATCGTTTAGAAGAAACGAATTATGGTGACTGGAGTGTTGCTATGCGTGTTTCTCTTGATGCTAAGAATAAGATCGGGTTTATAGATGGATCTTTACCTCGTCCGTTGGAATCGGATAGTAATTTTCGTCTATGGTCTCGATGTAACAGTATGGTGAAGTCCTGGCTCTTGAATTCTGTATGTCCTCAGATATATCGTAGCATTTTACGTATTGAGAATGCTTCTGATATATGGCGTGATCTCCATAGTCGATTTCACATGACTAATCTCCCACGCACATACAATCTCACTCAAGAACTTCAGGATTTTCGTCAAGGATCTTTATCTCTCTCTGAATATTATACTCGCTTGAAGACTTTATGGGATCAGTTGGATAGTGCAGAGGAGATCAATGATCCTTGTACTTGTGGAAAAGCTGCTCGTCTGCAACAGAAGGCAGAGAGAGCTAAGATAGTAAAATTCCTAGCTGGATTGAATGAGTCTTATGCTATCATTCGCAGACAGATTATTGCTAAGAAAGTTCTTCCTAGTTTAGCTGAGGTGTATAACATTTTGGATCAAGATAACAGTCAACAAGGGTTCTCAAATGTTATTGCTCCACCTACAGTTTTTCAAGTCTCTGAGAGTGTTCCTGCCAGCTCTGTTTTTGTTTCTAACCCTGCAGATCAAACCATATGCTATGTTCAGAATGGTCCTAATAAAGGAAGGCCAATTTGTTCATTTTGCAATCGTGTTGGTCATATTGCAGAAAGATGTTACAAGAAACATGGCTTTCCCCCTGGTTTCACTCCTGCTACAAAGAAACAGTCTACTGAGAAGAATCAGAAATCTCAACCTCTGGCTGCTCAAGTTGCTATGATGCCTACAGAACCTGATAGTTTGGAATCTATGATTGGGAACATGAATAAAGACCAGCTCAAACAGTTCATTGCTATGTTCAGTTCTCAGCTTCAGTTTCAACCAAACAATACCACAGCTGTAGCTTCTACTTCCAATTCCACTAATACTGGTATTTCTTTCTCTCCATCTACCTATTGTTTTGTTGGAATCTTGACTGTTGCCAATAAGACTCTATCCTCACAATCATGGGTGATAGATTCTGGGGCTACACATCATGTTTGCCATGATAAGAGTCTCTTCTTGATGATTGATCCGAATCTTGTGAGTTCAGTAAACTTACCTACAGGATCTACAGTCAAGATTAGTGGTGTTGGCACTGTTAAGATCAATGACAACATTCTTCTCAAGAATGTGTTGTTCATTCCAGAATTTAGATTGAATCTCCTGAGTATTAGCTCTCTCACTGATGATCTTGGTTCTCGTGTAATATTTGATCCGTCTACTTGTGAAATTCAGGATCCTATCAGGGGAATGAGCATTGGGAGAGGTAGGAGAGTGTCAAATCTATATGTGTTGGACATTGAAGAAACACCAGTCTCAGTGAATGCAGTTGTGGATATCAGTTTATGGCATAGAAGACTTGGTCATGCTTCTTTACAGAGATTGGATGTCATTTCTGAGTCTTTAGGAACTACCAAGCATAAGAATAAAGGAACAGATTTTTGTCATGTCTGTCACTTAGCTAAGCAGAGGAAGTTGTCTTTTCCTTCTCCAAATAACATTTGTAATGAAACCTTTGACATGTTGCATATTGATATTTGGGGACCTTTCTCTGTGGAAACATTTGATGACCATTCAAGAGCAACATGGATTTACTTGTTAAGGAATAAGTCAGAAGTCCTCACAGTATTTCCAGCTTTTATTCAACAAGTTGAGACTCAGTATAATAAGAAGGTAAAAGCAGTGAGATCAGATAATGCTCCTGAGTTGAGTTTTACAAGCTTCTATCAACAAAAAGGGATTATGTCTTTCCATTCCTGTCCAGAAACTCCTGAGCAGAATTCAGTAGTGGAGAGGAAGCATCAACATATTCTGAATGTTGCTAGAGCATTGATGTTCCAATCTCAGGTTCCTTTGTCTTTTTGGGGTGATTGTGTGTTGACTGCAGTCTTTCTCATCAACAGAACACCATCACCGCTTCTTGCTAACAAGGCACCATATGAGATTCTCACTGGTACACCTCCTAAGTATGATCAGATCAGAACGTTTGGATGTCTTTGTTACAGTTCAACATCACCAAAACAGAGACACAAATTTCAACCACGATCAAGATCATGTGTGTTTTTGGGCTATCCAGCTGGTTACAAAGGGTATAAGTTGATGGATTTGGAGAGTAACAAAGTTTTTGTATCCAGGAATGTGATTTTTCATGAAGATGAGTTTCCATTGGCCACATCTCAACAGTCTGAGGCATCTCTGGAATTTTTCACACCAATGGTTCCTGTGCATACAACTGAACAGCAAACTCCTCTTCCTTCTTTTCATCCCTCACAAATTTCTGATATATCACTACCCATTTCTTCACAAAGAATTCGGAAACCTCCTGCTCATTTGTCTGATTATCATTGCAATTCTATGCAATCTCTTTTCAAATATCCTATTTCATCTACTCTTTCTTACTCTAAAATTTCTCCTTCTCATTTGTGTTATATCAATAATATCACAAAGATTCATATTCCAAATTCATATGCTGAAGCACAGGGCACCAAAGAATGGTGTGAGGCAGTTGATGCAGAGATTGGTGCAATGGAATCCACTAATACATGGGAAGTGACAACATTACCACACGGGAAGAAAGCAGTAGGTTGTAAATGGGTGTTTACTGTGAAGTTTTTGGCAGATGGTACACTTGAGAGATATAAAGCAAGGTTAGTGGCTAAAGGTTATACTCAGAAAGAAGGTTTAGATTATACTGAAACCTTTTCTCCTGTCGCTAAAATGGCCACTATCAAGCTATTGCTCAAAGTATCAGCTTCTAAGAAATGGTTTCTGAAACAATTGGATGTATCGAATGCATTTTTGAATGGAGAATTGGATGAAGAAATCTTCATGAAGTTGCCTGAAGGATATGCAGATCGAAAAGGCATTGTTTTACCACCTAATTCAGTTTGCAGGTTGAAAAGGTCCATTTATGGCCTGAAACAGGCTTCAAGACAATGGTTCAAGAAGTTTTCAACCTCCTTATTGAATTTGGGTTTTCAGAAGACTCATGGAGATCATACACTCTTTCTTCGCAGTTATGATGGTGATTTTGTGGTTGTTTTAGTGTATGTCGATGACATAGTCATTGCAAGTACGAGTGAAGTTGCTGCAGCCAAGCTCACTTCTGACTTGCAGGCTCAGTTTAAACTTCGTAATCTTGGGGATTTGAAGTATTTCCTCGGCTTGGAGATTGCTCGTACTGCTGCAGGTATTTCTTTATGTCAGCGGAAATATGCTTTGGAATTGCTTACTTCCACTGGCATGCTTCATTGTCAACCTGCTTCTACACCTATGGTTCCAAATCTGAGAATGATGAAGGGTGATGGTGATTTACTTGAAGACAGAGAAATGTATCGTCGCATTGTTGGAAAATTGATGTATTTGACCATCACCAGACCAGATTTGAGCTTTGCTGTTAACAAGTTGTGCCAATTTTCTGCTGCTCCACGTACAACTCAGTTGATTGGTGTTTATCGTGTCTTGCAGTACATCAAAGGCACTGTAGGTCAAGGTCTATTCTACTCTGCTTCTCCTGATCTTACTTTGAAAGGATTTGCAGATGCAGATTGGGCATCATGTCCTGATAGTCGTCGCTCCACTACTGGTTTCACCATGTTTGTTGGTGATTCCCTTATCTCTTGGCGCTCCAAGAAGCAAACAACAGTTTCTCGCTCTTCTGCAGAAGCTGAATACAGAGCTCTTGCTCTGGCTACTTGTGAGGTCATTTGGTTACAGACTTTGCTAAAATCCTTGCAAGTCTCATCTGCTGTTCCTATACTCTTCTCAGATAGTACAACAGCCATACACATTGCTACCAATCCTGTATTTCACGAGAGAACGAAACATATTGACATTGACTGTCATACAGTCCGGGATCGGTTAGACAATGGCGAGCTTCGACTACTTCATGTTCGCACAGATGATCAGATTGCTGACATCTTAACTAAACCATTGTTCCCTCATCAGTTTGAATATCTGAAGTCCAAGATGAACATCCTTAACATTTTTGGAGTGTCATCTTGAGGGGGCCTATCAGAT