ID Class Order Superfamily Length Start End Strand View
Scaffold10826_LTR-Gypsy_41 RetrotransposonsLTRLTR-Gypsy156811568-
Scaffold10826_LTR-Gypsy_42 RetrotransposonsLTRLTR-Gypsy70615722277-
Scaffold10826_LTR-Gypsy_43 RetrotransposonsLTRLTR-Gypsy30022982597-
Scaffold10826_LTR-Gypsy_44 RetrotransposonsLTRLTR-Gypsy62626373262-
Scaffold10840_LTR-Gypsy_45 RetrotransposonsLTRLTR-Gypsy1395105951197-
Scaffold10869_LTR-Gypsy_46 RetrotransposonsLTRLTR-Gypsy1797791875+
Scaffold10869_LTR-Gypsy_47 RetrotransposonsLTRLTR-Gypsy199118943884+
Scaffold10869_LTR-Gypsy_48 RetrotransposonsLTRLTR-Gypsy80639244729+
Scaffold10869_LTR-Gypsy_49 RetrotransposonsLTRLTR-Gypsy1031030310405-
Scaffold10869_LTR-Gypsy_50 RetrotransposonsLTRLTR-Gypsy1871920019386-
Scaffold10869_LTR-Gypsy_51 RetrotransposonsLTRLTR-Gypsy1032038320485-
Scaffold10869_LTR-Gypsy_52 RetrotransposonsLTRLTR-Gypsy2324592146152-
Scaffold1095_LTR-Gypsy_53 RetrotransposonsLTRLTR-Gypsy1872986730053+
Scaffold1099_LTR-Gypsy_54 RetrotransposonsLTRLTR-Gypsy258308565+
Scaffold11000_LTR-Gypsy_55 RetrotransposonsLTRLTR-Gypsy79752576053-
Scaffold11000_LTR-Gypsy_56 RetrotransposonsLTRLTR-Gypsy85261296980-
Scaffold11000_LTR-Gypsy_57 RetrotransposonsLTRLTR-Gypsy17872307407-
Scaffold11000_LTR-Gypsy_58 RetrotransposonsLTRLTR-Gypsy163974089046-
Scaffold11000_LTR-Gypsy_59 RetrotransposonsLTRLTR-Gypsy18294779658-
Scaffold11000_LTR-Gypsy_60 RetrotransposonsLTRLTR-Gypsy752991110662-

< 3 4 5 6 7 > Total 90


Capsella grandiflora (v1.1)

ID:

Scaffold10826_LTR-Gypsy_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1568

Start:

1  

End:

1568

Strand:

-

>Scaffold10826_LTR-Gypsy_41

CTCAGAACTGGTTCTTCTGCATCAAAAGGTGCTAAGTCAGTAACATTGAAAGTAGGAGAAATGTTTAACTCACCTGGCAGCTCAAGCTTGTAGGCATTATCGTTGATCTTCTCTAAAACTCGGAAAGGGCCGTCGCCTCTTGGTGAAAGCTTGgacttccgttgGTTAGGGAAACGTTCATGGCGCATATGTAGCCAAACCCAATCTCCAGGTTCAAAGGTGACTTTTCTACGGCCTTTGTTGGCTTGTTCCCGGTACTTTTCCGTCTTCTTCTCTACGTtctccttagcttgttggtgtagtttcttcacaaactcggcccgtgtcTCTCCATCTGCGCTAAAAACAGCTTGTGGCAATGGTGAAAGATCAAGTGGAGTGAGGGGATTAAAACCATAAACAACTTCAAAGGGGGAGAATTTGGTAGCTgagtgtttagcATGATTGTAAGCAAACTCGATGTAAGGTAGGCAAGTGAGCCAGTTCCTTAAGTTCTTACCGACCGTGGCCCGTAGTAAGGTAGAGAGTGTTCGGTTTACCACCTCGGTTTGGCCGTCAGTTTGAGGGTGACACGTCGTGGAGAAGAGGAGTTTTGTCCCAAGCTTCTTCCATAAGGTTTTCCAAAAGTGACTTAGAAATTTCGTGTCACGGTCTGACACTATGGTCCTTGGTACTCCATGAAGACGAACAACCTCTTTAAAGAATAggtccgccgtttgagttgcatcattagtcttgttgcatggaatgaaatggGCCATCTTTGAAAACCTGTCAACAACTACAAAGATCGAGTCCTTGTGGTTGATCTTGGGAAGACCTAAAACGAAATCCATAGATATATCCACCCAAGGCATGTTAGGAATAGGTAAAGGCATgtataaaccgtgtggatgtaacctggatttagcctttAAGCAAGTGACGCATTTAGAACAGTAGCGTTCTACGTCCTTCTTCAAGTGAGGCCAAAAGAAGTGCTCGGTTAGTACACTTATGGTCTTGTCTCGCCCAAAATGTCCCATGAGACCTCCTCCATGAGCTTCTCGGACTAGTAActctctcatgGACCCTTGTGGAATACAAAGCCGCTTCTCTTTGAATAGAAAACCGTCTTGTTGATAATATACTCCAAATGCAGCCCTTGTAGTCTCCTTGTAGATATCTTGAAAGTCGGGATCttcttcatataTTCTCTTAATGTGTTCAAACCCCATGATCTTAGCCTCCATTGTGGTGATGAGGGCGTGTCTCCTTGACAAAGCGTCCGCGACAATGTTTTCTTTTCCCTTCTTGTACTTGATCATGTACGGAAAGGTTTCTATGAACTCTAGCCACCTCGCATGCCTCTTCTTGAGTGTGGTCTGACCTCGTAAGTGCTTGAGGGTTTCGTgatcagtatgaATGACAAACTCCTTGGAGAGTAGATAGTGCTGCCATGTCTCTAGGGATCGCACTAAAGCATAGAGCTCTTTGTCATAAGTTGGATAGTTGAGTGCGGCTCCACTTAACTTCTCACTGAAGTAGGCGATAGGCTTGCCTCCTTGAGTTAGAACAGCTCCAATGCC

Capsella grandiflora (v1.1)

ID:

Scaffold10826_LTR-Gypsy_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

706

Start:

1572  

End:

2277

Strand:

-

>Scaffold10826_LTR-Gypsy_42

accttccTCCCGGAGCGTCTTTAGAACCTGTTCTAGATGGCCTAAGTGATCTGCAAAGCATGTACTATAGATGAGTATATCGTCAAAATAAACCACTACAAACTTACAAATGTATGCTCTTAGAACGTGATTCATGAGCCTCATgaaagtgctagGTGCGTTTGTAAGCCCAAATGGCATTACTAGCCACTCGTACAAGCCTCGCTTAGTTTTGAATGCGGTCTTCCATTCGTCGCcttccttcattCTAACTTGATGGTATCCGCTCTTCAAGTCTATCTTAGAGAAGATGGTTGCTCCATGTAGTTCATCTAACATATCATCCAGCCTCGGAATGGGATGTCTATACTTGATGGTAatgttgtttatAGCACGGCAATCCACACACATCCTCCATGTCCCATCTTTCTTGGGTACTAGTAGGACAGGAACAGCACATGGACTTAGGCTCTCTCGAATGTATCCCTTGGACATAAGATCTTGAACTTGTAGCTCCAATTCCTTAGCTTCCTCGGGGTTTACTCGGTACGCCGGTCGGTTTGGTAGAGGAGCACCGGGCACTAGGTCGATTTGATGCTCGATTCCTCTAAGTGGTGGTAATCCAGcgggtacttctTCAGGAAAGACGTCCGTGAACTTCCCTAAAAGTTCTAGTATCTCCGTGGGTACTTCTCTCTCTTCGGTTCCTGAAAGCAACCTCATCTTA

Capsella grandiflora (v1.1)

ID:

Scaffold10826_LTR-Gypsy_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

300

Start:

2298  

End:

2597

Strand:

-

>Scaffold10826_LTR-Gypsy_43

TTGCATTTCATAGACTTCTTGTGGGGTTAATGGTGCGAGGTTATGCTTGCGGttgttgtgggtGAAACTATAGTAGTTGCTTCGCCCGTTGTGAAGTGTATCTTTGTCGAATTGCCACGGCCTTCCTAGAAGTAAGTGACCGGCTTGCATTGGCACCACATCACATAGAACTTGGTCGGCATACTTTCCcacactaaaaggtacggtgacttgctcggatatcttgagctcggtctcgtcattgagccatttgagacggtaaggcctcgggtgtcttgtcttcttgaaacctaacttgtc

Capsella grandiflora (v1.1)

ID:

Scaffold10826_LTR-Gypsy_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

626

Start:

2637  

End:

3262

Strand:

-

>Scaffold10826_LTR-Gypsy_44

CTTCTTAAAATCAGGATTAACTTCTATAGACTTCCCCTTGTCTATGTTACGTTGGGGCTGTGGTGTCCAGTTGGTTCTACTCCGGCTAGTTGAAGCAGTCTTCTTCTTGATATGTTGCTCCGCTTGTATAGCCAagtgcagcaagTCTTCTAAGTCACGATACACTTGCATCTCAACCTTTCTCTGAATTCGGTCGTTTAGACCGTCAAGAAATTGAGCCATGACAGTTTCCTCGGACCCATCAATCTCTAATCTGTTTTTAAGGAGCTCAAACTCCTCAAAATACTCTTCTACGGTtttggtgcctTGAGTTAGTTTCCGAAATCTTTTCTGCAAGTCTCGGTGATAGTATGATGGCACATATCTCTTCTTTAGGCAGTACTTCATATCTTCCCAAGCAAGAATCTGGCGGTGTCCAAGTCTCCTTctctccgaaaCTTCTCTATCCCACCAAACTAATGCATTCTCCGTGAACTGTGCAGCAGCAAGGGACACCTTCTTTGCATCCGAGTAGTTGTAATACTCGAATATGGACTCCATTCTCCTTTCCCACTCAAGGTAAGCTTCTGGATTTATCCTTCCAGCAAATGTTggagccgtgaGCTTCAAGTCATTATTGCCTTGTC

Capsella grandiflora (v1.1)

ID:

Scaffold10840_LTR-Gypsy_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

139

Start:

51059  

End:

51197

Strand:

-

>Scaffold10840_LTR-Gypsy_45

CAAAGAGAGCGTAAGCAAAATAATTGCTTAGTGAGTGCGCTTAAGCCACTCACCGAGCCAAGTATATAAATCACATCAAGCCACATATCAATCAATAAGATCACAAGACATGACTCGGCAAGCCTAATTACCCGGGTTA

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1797

Start:

79  

End:

1875

Strand:

+

>Scaffold10869_LTR-Gypsy_46

AGCCAAATCTATCCTTGCTCAACTTAAGAGTGCCGAATCCTAGGGAGATTATTATCAAGTGGTATAAGAGCAGGCTCTGAAGTTGAGTACTGTATCCCTTTTATCTTTTTTCATCTTTGGCTGTTCATCTTCTCTGTCGCCCAGTCATATTGTTTTAATTTTCATATATTATTGGTTTGTTAGAAAATTACGAAATCAATTGCATATGAATCTAGGTCGAGTCTAGTTTTTTTTTtttttttaaatATTTTTGGAATTTTTCGGCATCGTTTGATAATTTATTTGGTCCGATCAATTCAGACTATCGTGAGTAGGGTTTCAGAAAAGTTTGGTGTCATTTGAAGGGTCATTTGTTTTTGTTGTGTTCAATCATTTTTATTTCAAAAAGAACTTGTTACTGGTGATTTGTGTGGTGATTTGTTTCAGGAAAAATGGTTGATAGTGATGAAGAAGATGCTATTCGCAATCGCAACAACAAGATGTTGATGGAAGTAATGACCTCTCAGCTGAAGAAAATGTTAGAAAACGAACTAAATGCTTTTCGTCAAGAGTTACAACCAAGTTCAGAtcatgttaaaaATTTGCCGAGAAGAAGGGAACAAAGGAGATCCCCAAGAAGGAATGAAGAACCACGTGAACATGCTAGAGATGAAGTAGCTAATGAATACTATGGACATCATAGTAGTTCTTctcaaagtagcCAAAGGAGGCAAAGACGTGCGAGAGAAGGCACAAATCTTCAACAAGAAAATCTTGGAGGTCTAAATCTTAAAATTCCACCATTCCATGGGAAAAATGATCCAGATGCATATTTAGAATGGGAGAAGAAGATAGAGTTGGTTTTCAATGTTCAATACTACACGGAGATCAATAGAGTGAGAGTTGCTGCTACTGAATTTTATGActacgctcttaGCTGGTGGGATCAACTAGTGACTTCAAGAAGGCGCAATGGAGAATATCCAGTGGAGTCTTGGTCAGAAATGAAAGCTCTCATGAGGAAACGTTTTGTTCCTAGTTATTACCACCGTGAGCTGCACCTTAAGCTAAGGAGACTCACACAAGGAAGCCGATCTGCTGAGGAATATTACAAGGAGATGGAGACCTTAATGTTGCGggctgatatttCAGAAGATAGAGAAGCGACAATTTCAAGGTTTCTTAGGGGTTTGAATATAGAAATTCAAGACAGATTGGAGACGCAACATTATGTGGagctagaggaGATGTTGCATAAAGCTATTCTATTTGAGCAGCAAGTTACGAGAAAAAATTCTTCACGTTCTAGGTACGGTCAAGGATTTTCTACTAGTAAGCCAAGTTACCCTGATGAGGAGAGGCCGAGCTACTCAAAAGAAATCAAGTCATCAACCAGCCCAAAATTAGAAGCCAAACCTTATGCAACAACTCAAGATTACAAaggtaaagcagTGGCTTCCACGTCTAGAACTCGTGATGTGAGGTGTTATAAAAGTCAAGGAAAGGGACATTATGCGAATGAATGCCCCAacaagagaatCATGATTCTTCTAGAGAATGGAGATATAGAATCCGAAGAAGAGAATCTAGATTCACCTTTGGAAGAGAATGTAGAGCTGCTGCCTAAAGGAGATTTATTGGTCGTAAGGAGATTTTTGAGCATCCAATCTAAGCCCGAGGAGCAAGACCAAAGAGAAAATTTGTTTCACACGCGTTGTCACGTTCAAGGGAAAATTTGTAGCCTCATCATTGATGGAGGAAGTTGTACCAATGTTGCGAGTGATACTATGGTCAAGAAGCTGGGATTGAGTGTAAAGA

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1991

Start:

1894  

End:

3884

Strand:

+

>Scaffold10869_LTR-Gypsy_47

GAGAATCCAGATTCACCTTTGGAAGAAAATGTAGAGATGCCGCCTAAAGGAGATTCATTGGTTTCTAGGAGATCTTTGAGCATCCAATCTAAGACCGAGGAGCAAGACCAAAGAGATAATTTGTTTCACACGCGTTGTCGTGTTCAAGGAAAAATTTGCAGATTCATCATTGATGGCAGAAGCTGTACCAATGTAGCGAGTGATACTATGGTCAAGAAGCTGGGATTGAGTGTAAAGAAGCATCCAAGGCCGTAtaaacttcaatggcttaacgatagtggagaaatgaaggttaaaaatcaagtggttgtccccattgtcatcggcaaatatgaggatgagattttgtgtgatgtgttaccaatggaagctgggcatattcttctcgggagaccatggcaatctgatcgaagggtgatgcATAATGGTTACACCAATCGCTATTCCTTTGAGCACAAAGGCAGAAAAACTTTTTTGGACCCGATGACTCCACATGAGGTTTATCTCGACCAAATGCATCTAAAACAAAAAGAagaacgaactaCCAAGCAACCAAGTTTCTTTTCCAAGGCTAGTGAGGTTAAGCAAGCTTTGAGTTCTGATAAACCAATGCTTTTATTTATATTTAAAGAAGCTCTTACGAATTTAGCTAACCTTGCACCGGTGCTGCCAAGTGAGACGACTAACCTTTTGCAGGAATTTgaggatgtattTCCAGAGGATAATCCGAAAGGTCTACCACCCAACCGTGGAATTGAGCACCAAATcgattttgtaCCCGGAGCTTCACTTCCAAACCGACCAGCCTATAGAACCAATCCAATGGAGACAAAAGAGCTACAAAGACAAGTGGACAAGCTCATGGAGAAAGGACACATTAGAGAGAGCATGAGTCCCTGTGTTGTTTTGGTCTTACTTGTGCCTAAGAAAGATGGTAGTTGGCGCATGTGTGTTGATTGCCGAGCCATCAACATCATAACAGTGAAGTCTCGACACCCTATCCCTAGATTAGATGATATGCTTGATGAATTGCATGGTTTTAACATATTTTCTAAAATTGATCTTAAAAGTGGATATCATCCAACTAGGATGAAAGAAGGGGATGAATggaaaactgcaTTTAAAACTAAGCATGGGTTATAAGAGTGGTTAGTTATACCATTTGGGTTGACAAATGCACCTAGTACATTTATGAGGTTAATGAATCATATTCTAAGAGCTTATATTGGAATATTTGTTGTAGTTTACTTTGATGCCATCTTAGTCTACAACAAAAGCTTAATTGAGCATATAGAACATTTAGAATCTGTTTTGAATGTCCTTAGAaaggaaaatcTCTATGCCAACCTAAAGAAGTGCACAATTTGCACCGATAATCTTGTGTTTCTAGGCTTTGTTGTGAGTGCAGATGGAGttaaggttgacGAGGAGAAAGTTAAGGCGATTAAAGATTGGCCAAGTCCTAAGACCGTGGGAGAAGTAAGAAGTTTCCATGGCCTTGCTGGATTTTATAGAAGATTTGTTAAGGACTTTAGTACTATTGCTGCACCACTCACGGATGTTATCAAGAAGGATGTGGGATTCAAATGGgagcaagctcAAGAAAACGCTTTTCAGTCCCTTAAAAAAAAGCTCACTAACGCACATTTTTTGATATTGCCTGATTTTCTTACAACATTTGAAATTGAGTGTGATGCCTCAGGTATATGTATTGGAGCTGTTCTAATGCAAGATAAAAagcctattgcCTATTTCAGCGAGAAACTTGGAGGAGCGACACTGAATTATCCTGCGTATGACAAGGAGCTGTACGCCTTGGTCTGAGCCCTCCAAACATGTTAACACTACTTGTGGCCTAAAGAATTCGTCATTCATACTGATCATGAGTAGCTTAAGCACTTGAAAGGCCAACAAAAACTTAACAAAAGACACGCTAGGTGGGTTGAGTTCATTGAGACATTTCCATATGTCATCAAATACAAAAAAGATGA

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

806

Start:

3924  

End:

4729

Strand:

+

>Scaffold10869_LTR-Gypsy_48

TGATATGATCATGGATAGCACTAAAGAATTGGAGCATGAACCGGAGATGGAACTTGAAGAAGCTAAGCTTGTAGTTGAGGAGAAGCAGCTCGGAGAGGAGGATAAGCATGTAGCCGAGGATGCTCTTGTCACACCAAGTGGTCCAATGACTCGTTCAAGAACTAAACTGTTTAAGGAAGCTGTTGGAGAATTACTTAATCAGATCTGGAGCCAACACGATCAAGACATCAAGTATGAAGGAAAAGCTTGTCAAACcactttagttttgatccaagctaagtgattcaacaatggGAAAAGTGTCATGGTTGTACTCTTTTTCCCTTGTCAAGTTTTGTCCCACTTGGTTTTCTTGACAAGGTTTTTAATAAGGCAGCTGTTTCAGTTCACCATTGCCCAtttgttgaatCAAAAGCCCAAGGCCTTTTATGAACTTAAGAAGCCACGTCCAAGAAGAGAAAGAGGGTCAATCTATCTTTTAAatttcaagttTTTAATTTATTGCTTTGTATTTTTGAGATCAGCCTTATAACTTGTTCCAAGGCTTGTTCTTTCTCTTTTTTATAAACCCCCTTTGTAATCTCTTTGAGAACTCAACCTTTCTTTTTATcaaaaccttttatttctccaaggagatcttttcgttGGTGTGTATATCCATCGATCCTCTTGTTGGTGTGTATATCCAGCAAAACCCTTAGCTTCTTTGATGCGTATATCCAAAGGATCTAAGTTCGGTAtcgtgaagctATTCTGCAAGCTTCTTGTGATATCCATCGATCATTCAACTTCTATTCCACACCACG

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

103

Start:

10303  

End:

10405

Strand:

-

>Scaffold10869_LTR-Gypsy_49

CACTAAGGTTTCCTGCAAACAAATATGGAGTCATGAGTAATCAAATATTACACAGTGAGTTCGgacacctacaataatcgttcattcaacccaaccccaaata

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

187

Start:

19200  

End:

19386

Strand:

-

>Scaffold10869_LTR-Gypsy_50

AAACGCGTGAATGCGCTAGGATTAACTGCCTCGTTAAAACCTCCTCGGTAAAACCCAATGGGATAAAAACCGAAGTAGGAAAAAGAGTACAGTCGCTCGCTAACGACTTAAACGTcttcaccaatgGTGATGGTGAAGACCATCCACGATGGCCCTTCGTCTTGAATGGTTGGCTCGATGAAATCGT

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

103

Start:

20383  

End:

20485

Strand:

-

>Scaffold10869_LTR-Gypsy_51

TACACCGGGTTCCCTATGTATTGAACTCCCCTAATGATCCCCACTAAGGTTTCTTGCAAACAAATATGGAGTCATGAGTAATCAAATATTACACAGTGAGTTC

Capsella grandiflora (v1.1)

ID:

Scaffold10869_LTR-Gypsy_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

232

Start:

45921  

End:

46152

Strand:

-

>Scaffold10869_LTR-Gypsy_52

TGCAGCAGTAATTACGCTTGAAACTCCGAGTATCAATTGATCACGAGATCAACAACCATATCTAACAGTTTTCGGCTTTTCTCTAGTATCAATGGATCAAGAGAAAGGAGAAACAAAGACTTGAAAGAGAGAAAGCATATATGTTTTATTAATAAAAATCAACCAACAACTTAGAATACATTAGCTAGAGTATTTATATTGAAACTTAGAAACCCTAGTCAAGCCTTGATGC

Capsella grandiflora (v1.1)

ID:

Scaffold1095_LTR-Gypsy_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

187

Start:

29867  

End:

30053

Strand:

+

>Scaffold1095_LTR-Gypsy_53

AGAGAGGATTACTAAGCCTTTCTACTGTTCCACTACGTCTTAAGGCCCATGCAAAGTCAAGCTCAGTGACTTTAAACAAGCTCACTTGGGAGGAAGTCCCAATGGTATCcttgtatataTTTATTTAAGATTATGTTGTTTTGGATTATTTGCGTTTTGTTTTAAGTGTGTTCAGGTGAGATTATGA

Capsella grandiflora (v1.1)

ID:

Scaffold1099_LTR-Gypsy_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

258

Start:

308  

End:

565

Strand:

+

>Scaffold1099_LTR-Gypsy_54

GCCTTAGCGCTAGCTGAAGGACTCTTATAAAGTCCCCCTTGCAGCATTTGTACAACTTGGCACCCTTGATTATCAATAAAGAATCCAAACTTTTGTCAGTTTTCTCTTTAAATATTTGTGAGAGAATAAGCTTGTTCTTTGTCTTGTGTGTGTGATTCACTAAGGCTGAGTTCGTACACCGTATGAGAGATCAATCACATCTCTGTGGTGTACTTCAATCCGCCAGCACTTCCCCTCCATTCGATCCAACACGAGAGA

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

797

Start:

5257  

End:

6053

Strand:

-

>Scaffold11000_LTR-Gypsy_55

GACTGAAACCTCCCCCTCTTAAACCTCACTGTCCTCATTGATAGTTGGATGTGGATTTCCCAAAGTAATTGCGTTAGCAGTAGCAAACTCGTTAGGGTTCATGATAGACTTTCCTGAGAGCTGGCCGGAAGAAGTGGAGGTTAGCTTGCCTTCCAAGTGAGCTACCTTGTTGCTCAAAACATCGAACTTCTTGTTCAGGTCGTTTAGAGATGTGTTGACATAATTGCGAATCTCAGATAACTTTTTTCTTGATCAAGGTTGCTGTTGGCTTGTCCTTGGAGAATTTGATGAAGTATTGTTTGCGTCCTGTTCTGGAGGTGCGTTAGGAGGATGTTGTTGGAACCCTGGAGGATGTGTCATAGGTTGTTAATAAGCACCTTGGGACTGTTGCTGAgggataaaagCTTGTTTTTGATTGAAGCCAACAAATGGCTTGTTCTGGAATTGCTGTTGTTGAGGTGGATAGACTTGATTATGAGGGATTGCAACGTTGGTGCTTCTATAAAACAGATTTGGGTTGAGTTTATAGTTATTGTTACCCTTTTGGTAACCGCCTTgattctggataTAGCTCACCTCCTCAGTATTCTAATCACCATCATGAGGTTGAAAGGTCTCCTCctcttgaacaaAGTGAACACTCTTCTGCTGGTTCATCAAAAAATTATCGAGCTTTTCGTTAAGTGCCTTCATATCCTTCTTATACTTGTCCTCTTGGTCAGTGTTTCCCCGTACGGTTCTGTCATAGTCCTCATTGTATGTTCCATCGAACTGAGCTAGCTTCTCCACGAGTTCCC

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

852

Start:

6129  

End:

6980

Strand:

-

>Scaffold11000_LTR-Gypsy_56

AATAACAAAAGAATTAAACAGAAAGCACAAACGGATAGAAGATCCTGAGGATGAGGTTATTGATGTAGGTGGAGTATCCTAATCTACTTCGAGTGTTTAACAAACGACAAACATACTAATCCCTAGACAATGAACATCAAatactaattaatccaatctcttggcagaaactatcatgtttacaacacttcctaatctcaaatctctttgatgaaacatgcagtaaacagacatgaagaaacagtccattaatgtcaataaaCTTCTTAGACATCTAATCTCTTAGGCTAAGCAAGTATATCTCTGGTATTAATTGTTCATACATTTCATCAAACACTTGGTAGGTGTTGAAATGTCTGGGATCTAATTCCACTTGATCAGAGAAGAATTAGCTATGAatacaccaatccaGAAGGGAACAAACGAATCTAACTTAAACACTCTAGCAAACTAACATTCTCTACCTAATCTATCCCATCCTCAAGAATCCTAACACTACTCAGACGTTGAAATCATGCTAAACATCATAAACCCAGAAGATAAACAATAATGATTCAAGAACTAAGAGCAAAATCTCAATAACTCAAAAGAAATATGAATTACAATTCTCTTGATTGTTTGGTGGCTAACAACAAAAACCTAAGGGTAAAAACTAAATCCCTTGGGCAATGCCAAAAGAGACCTAATTATACCAATGTTTGGGCAaaacttaaaacATAAAACGACAAAGTAAAAATCGGTTTAAAAGTTGTAGTGACCCTGTTGGTCGAGTGAGTGCGTCGAGTAACACATAATTTCTTCTCTGCATTATTACATACTCGACTATGTATCTCGAGTGAGCGTGTCGAGTGA

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

178

Start:

7230  

End:

7407

Strand:

-

>Scaffold11000_LTR-Gypsy_57

GTACCTGAAACACTCCAAATATGCAGAATGTATGCAAGACATGCATGTTATGCATAAAACCTACCTAAGTATGCAAAACATGCAGAAAGTTATCAAAATATGATGCGAATCAACAAGTGAATGATGCTGAAAAGATAATGAATACACGCTCAAAAAGTGATGAAATACAAAGTTATCA

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1639

Start:

7408  

End:

9046

Strand:

-

>Scaffold11000_LTR-Gypsy_58

ACTGCCCTAAACTTAGTCTTTGCTTGCCCTCAAGGAAAGCAAAAAGAAACAAAGTGGAAGAGAGGtttgaaaatggGGTCTCATAACCTGTAACTTGCAAGCTAGAGCAGTTAAAATCAATGTCTTGGTTACTAAGTCTTTGATGCACCTAAGAGAACTTTACTTAAAGACTTTAGACAAACTCATCAAATCCGAAACTGAttatatcccttgatctacacatgcattcaaatcattcattccttttaacattcattactcaagaatatgaatatggttgtGCAAGGCTTAACAAACTCACTTGGCTAGACAGAAAAAGGTTTTGAGAATCGAGAGGGTTTAAACAATTTCAGGACAAGGATCTCTCAATGAATGAATTGAGCtttcaggagaatactaatggtgaggaccaacaaatgcatacatgaataaaaccttgactacccaatggttcccaagtgcttaCTCCTAATCATCTAAACCCGAATGATCCCTATGTCTACCCTTCAACATCATTCCTATTTTTTTTTTTTGCCTTAGGATATGTTTCTTATCAATACTAGTGGATAGGGGATTTCTTCCTTACTACGGTTTTGTATCCTTCTTAAGACATAATACATCAAAACTTTTTCTCTCCCTTTTCATCCCAGAACCATTCTCTGCATAACATGCTATCCCGATAAAAATCAATCACTAGAGTATAAACTTCTTGAAAAACATTCTCCTCCTGAGGACACAACCTTTTTATTTTCTGTTTCTCTTCTGTCTTTCCACAATCATTCCAATCTCAAACCCAAGTAAGAATCCCATCCTAGTCCTATCTGATTTGAAAGTAGAAATCAGAGCTACTCAAGATTTTAATCCTGTCGGCTCATACCTAACACGTTCTCCCCAAgcataatccggtaaaagacctaccactcaaaaattatcaattggcttgaaagaaaaggataggttgtgggtatggcaaactgatcaaaagaaagattagctacttggatcaacaagagtggtgaaaggaggaagatgatccaaatatgtatatggtggtcatgagtatgcaagcaaaacacaaccagatatttgcaagtcaagattaagtccttataaggtaaggaATGAGATCATATCACAACATGTTTCAACCAAGTTCAAGAATGCTCTTCATCAATTCCAAGTTTGTTTCAGACTTACTTCAAGTTCAATCATCATGCATCACAGAGCTAAAAACCAGGGCATTGATCTCAACTAGTGAATCATAGCAAGTTAacaaggtgtaaatcatcatcgccccctatgctaaTGCAACAGTCCTACATGAAACAATCTAGACTCAATCCTAATATGCAAATGTAAACTACAATGATCACTCTGTTTTTAAAGATTTTTTTCTGCAAATTTTTCAAATTTTTAGGGATTTTCAATGCATATATATGAATGCAGATTATATGCTAAAAAATAGAAATAAAAAAAGAGAACACAACATCAAAtgtcatcccaaACCCTCCCCCAAATTTAAATTACACAGTCCCTTGTGTAATAAAAATTTCACAGCTAGTTTGAGAATTAAACAAACAAAATTATGAAAATGCAATGGTATATACAGATTAAGGTTTGGAGTGATACCTTACTTAAA

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

182

Start:

9477  

End:

9658

Strand:

-

>Scaffold11000_LTR-Gypsy_59

TCCTGACCAACATAAAACCAAAAACAAAACTCAAAATAATAAGGAATCCTAAGCAGTATTTACAGGGATACCTTTGAGACTTCCTCCCAAGTGAGCTTGTTTATAGTCACTAACCTTGACTGTTTATGCCTTTTTGGCTTAAGGAGGCTCATAGAGAGGTGCTGAAGCACCCTCTATTCTCA

Capsella grandiflora (v1.1)

ID:

Scaffold11000_LTR-Gypsy_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

752

Start:

9911  

End:

10662

Strand:

-

>Scaffold11000_LTR-Gypsy_60

TAGTTGACTCATCTTCAGTGGAGAAGGTGTGTCCATTAACTATTGGCGTACTCAAGACGTCCTTGATATCAAACTTCATCTTGAAGTTCTTACCCGGATTGAGATCAATCATCCCTTTCCCAACATCAATGATTGCTCCTGTTGTAGCTAAGAATGGTCTTCCTAGGATAAGtggatcttgagGCTCATCATCCATCTCCAAAACAATGAAATCAGTTGGTACTTCTACTTCACCAATATTTATTGGGAGATCTTCCAACAAGCCATATGGAACTCTAATCGTTCTGTCTGCCAAGATGAGGGACAGGTTACACGATTTGTATTGTGTAAAACCAAACCTTCTAGCCACAGAGAGAGGCATGagactaactgaCGCTCCTAGGTCACAGAGAGACCTACTAAAAGATAGTGGACCTATTATGCAAGGCAAAGTAAATGAACCAGGatcttctagcTTCTTTGGGATAACCTCTTTATGGATAATGGCACAACACTCATGGTTAAGTGATCTTGCTCTCTCATCTTCCTCAGCTTTCTCCTGAGCATCTTTAGTTATTTCCATCTTCTCTTGAATCCTCTCCAAGAGGACCACTTTCAGGATTTTATTGTAAGACGGAATCTTTGCATGATCATCTACAAAAGCTTTTGTTAGTTCAGTCCCTTCAAGTGTGTCGAGCAGTCCTCTATACTTGTCCATTATTTTCTTCTTGAATCTTTCAGGgaatggtaatgGAGGCGTGTAGGGTGGAGGA