ID Class Order Superfamily Length Start End Strand View
Scaffold1138_LTR-Gypsy_81 RetrotransposonsLTRLTR-Gypsy62417462369-
Scaffold1138_LTR-Gypsy_82 RetrotransposonsLTRLTR-Gypsy152827594286-
Scaffold1138_LTR-Gypsy_83 RetrotransposonsLTRLTR-Gypsy24043944633-
Scaffold1138_LTR-Gypsy_84 RetrotransposonsLTRLTR-Gypsy7722738728158+
Scaffold11390_LTR-Gypsy_85 RetrotransposonsLTRLTR-Gypsy121254596670+
Scaffold11390_LTR-Gypsy_86 RetrotransposonsLTRLTR-Gypsy132167138033+
Scaffold11390_LTR-Gypsy_87 RetrotransposonsLTRLTR-Gypsy14080578196+
Scaffold11390_LTR-Gypsy_88 RetrotransposonsLTRLTR-Gypsy2671367213938-
Scaffold11390_LTR-Gypsy_89 RetrotransposonsLTRLTR-Gypsy13391395815296-
Scaffold11390_LTR-Gypsy_90 RetrotransposonsLTRLTR-Gypsy7641547416237-
Scaffold11446_LTR-Gypsy_91 RetrotransposonsLTRLTR-Gypsy822289422975+
Scaffold11502_LTR-Gypsy_92 RetrotransposonsLTRLTR-Gypsy2003635336552+
Scaffold1157_LTR-Gypsy_93 RetrotransposonsLTRLTR-Gypsy158152859153016-
Scaffold1158_LTR-Gypsy_94 RetrotransposonsLTRLTR-Gypsy151204354-
Scaffold11603_LTR-Gypsy_95 RetrotransposonsLTRLTR-Gypsy80940934901-
Scaffold11603_LTR-Gypsy_96 RetrotransposonsLTRLTR-Gypsy17049075076+
Scaffold11603_LTR-Gypsy_97 RetrotransposonsLTRLTR-Gypsy104960757123+
Scaffold11603_LTR-Gypsy_98 RetrotransposonsLTRLTR-Gypsy103371288160-
Scaffold11603_LTR-Gypsy_99 RetrotransposonsLTRLTR-Gypsy1081686716974-
Scaffold11603_LTR-Gypsy_100 RetrotransposonsLTRLTR-Gypsy1701704117210+

< 5 6 7 8 9 > Total 90


Capsella grandiflora (v1.1)

ID:

Scaffold1138_LTR-Gypsy_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

624

Start:

1746  

End:

2369

Strand:

-

>Scaffold1138_LTR-Gypsy_81

AGCCCCAAACAATTTATCTCGTCGTAACGCAACAAGAACTTCACGTGGATGGTCAAGATGTACCGAGAGAGATGAGATAAAAATCAAGAAATCATCAAAATAAACGACCACAAATTTACTGATCAATGGACGTAAAGCTTGATTCATAACACACTTGAAAGTGCTAGGCGCATTAGACAACCCAAAAGGCATGACCAACCATTCAAATAAACTTTCACGTGTTTTAAATGCCGTTTTCCACTCATCCTCCAGACGAATACGGATTTGGTGATAACCACTCTTTAGATTGAGCTTAGTAAAAATATTTGCTAAGCCAATTTGATCAAGAATATCATCAAGACGAGGAATAGGAAATCTATATCTCACAATTATTTTATTAATCACTCTGCTGTCCACGCACATACGCCATGTTCCATCTTTCTTAGGGATGGGAAGAGTCGGTACCGCACAAGGACTCAAAATCTTGCGCAAATAACCCTTGGACAGGAGATCTTCTACTTGTCGTTGAAGCTCGTCATGTTCAGCTGGACTCATACAATAATGCGGTCGATTAGGCAACACAGAATTAGGAGCTAAATCAATACATTTTTGAATATCTGTCAACGGAGGCAAACCAGTTGTTAA

Capsella grandiflora (v1.1)

ID:

Scaffold1138_LTR-Gypsy_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1528

Start:

2759  

End:

4286

Strand:

-

>Scaffold1138_LTR-Gypsy_82

TTGTGATCACCGTGTCGGAAGTTGTTTGAGAAGGCAACAAAGTGATATGTTTTCCTTATTAAGTAAAAATAATAGTGTTAGCAAATCCATCATGCATGATGCGGCGATAATACTGCCAAGGTCTGCCTTAGAGGAGATGACAAGCATCCATAGGAAGAATATCGCAAATAACCAAGTCCTTATAATTGGCACCAATCAAGAATGGAACACGACAACGCTTAGACACACGAGAGTCGGTGGAAGAATTCAGCCATGCTAAACAATAAGGAGTTGGATGTGATTCGGTAAACAAGGCGAGTTTGGAAACGGCTTCTTCTGAAATAACATTAGTAAAACTACCCGAATCAATTATCATACGACAGAGCTTGCCACGAATCGTACAGGTGGACTAAAAAATATTTGTGCAAAGCCAAGACTCCTCCACTCCACGAGTAAGAAGGTGATTCCGACGTATCATCAGCATGGTACCCGTATCCCCAATAACTTGTTCTGAATAGGCTTCATTATCTAGTTCATCGTGTTCATAAGTATCATAGATAGGTTCATCACTACGAGCAAGAAGACCACGTGTCGATGTGCATTAGGGCAGGATGACTGACGATGACCTTGTTCACCACACTTAAAACACTTAAACGTAGCACTACGTTGTTGTCCAAGAGACGAAGTATTCTCAGCAGACTCAATCAaatttcagttgctccatggatttcgaaattcctgttttagaaacagagccgtggcgaggacgttgtgaattccaagcagatgttttgttccgcgtttgctgctcgactggagtagcatgttctgaatcggtaaacgcaggcctccaataaacctCGAAACCATATGTTTTTCAATCTCGGTTAGTGAATTTCGAGCCGACAAGGAAAAAATTCAGAAGCATAATCATCCACAATTTTAGTCCCTTGTCTCAAATTCTTCAAACGAGTATACATCGTTCTAGTATAAGTGAAAGAAAAAAATCTCTTTGCATCAATTTTTTCATCTTCTCCCATGACAGAATACGTTCTTTGCCGGCCCGTAAGCGAGTCTCTTTGGTCTGTTGCCACCATGCTCAAGGTCGACCACGTAGACATTTAGCTATGAAAGGTACACGCATCGTTCAGGGACATCTTTGAACTCCAACAGCCAGTCAAGAACTCTTCTGGTTGTAAACCCCCAAAAAATTCAGGTAAATACAGGTTGAATCCGGACTCCCATCTCTTATGGTTAACTTGTTGAGCTGGAATAATGTCACGTTGTTGAGCAGGTCTGCCTAACCTAGCAAAAGGGTTGTCACCAAGGACATCTTCTCCATCGTCATCTTCTTCAAAAAGTTTATCAGCCTGTCTCTGCAAATTCGGAGCTCTTTGGTGTGCTTGCAAATTTGAACAAACTGATGCTTCAACCGTCGTGCGTAAGGTGTCATGCCAGCTTTGTTGAAACTCAGCCATCATTCCTCTAAACACATCGTTCTGCTCGTCAAGTTGCTGTTGTAGGGTCCTCTTTGGCGGCATGATGAGGA

Capsella grandiflora (v1.1)

ID:

Scaffold1138_LTR-Gypsy_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

240

Start:

4394  

End:

4633

Strand:

-

>Scaffold1138_LTR-Gypsy_83

GTATCAATGGATCACAATATCAAAGAATTCAAAGACTTCAGGAAAATAAAAGCTTTCTCGTTTTATTATTCAAAAACAACCAAGTCATAAGCTTACAATAATGTGAGTACTTATACTCTTTAAAACCATAAACCCTAGACGTctaagcttggagacaaagcaactccttagccgacattgttaatgtgataaataaaagcccatataagtattaagataaaatatagaagcctaataaga

Capsella grandiflora (v1.1)

ID:

Scaffold1138_LTR-Gypsy_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

772

Start:

27387  

End:

28158

Strand:

+

>Scaffold1138_LTR-Gypsy_84

gtgtcttcaattgtgtgtgcatggagacctagataattttctcgagccttcaatgagattccacagtaggTTGAGTATTTTGTTGTTTAATGCTCTTGTGTGCTTATCCTTCTTTTTTTTAGTGCAGATGCTTAAAGGTGGAGCTGCTTTCGTGGTCCTGGCCGTGGTCGCGGTGGGGGCGTGGTGTTGCCTCGGGTAGCGACACGAGTGTGGGTCTAAGTGCTACGACCGAGCATGCCAGTTATTCGCAGATGTTTCAGGAGGGATCCTTGGGTGATGCTAGTGCGAGTGCCGTTGGAGCTGGCTACCCCAGAGATGATACGTGTGTCGTTGAGAATCCAGTAGCGGGTGTTCCATTAGGTGGGGCCCAAGGTTAGAATGATCATCTTGCGGATCTGTTGACGCAGTTTTGGAAGCGGTTATCGAGAGCAGGACCAGTGCACGCTCCAAttggaccgccaggggtggcgggagtgcagccttttgggcgaggtgggcctggcgtgcagccaagTGGGCCCATTGGACAGTTGTCGAGCATCTGCAGCGGTTACGGATGTCCATGTTCTTTTAGTGTTCCATCTGCAGAGTGGAGGGTGAGATTGGAGCAGTACTTCCAGTCCATGAGGTACCGGAGGCGTACCGGGTGGATCTAGCAGCTCACAACTTGGCTGGTGATACACACTTATGGTGGAGGAGTGTGCTGGACGAGAGAGAGCAGAGATTGATGGTGTGTGGGGACTTCTTGGCAGAGTTTAATGCCAAGTATTTT

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1212

Start:

5459  

End:

6670

Strand:

+

>Scaffold11390_LTR-Gypsy_85

TCGAGTATCATTAAACCGACTTTCTATTTTGTCTGCTAGTGTTTTTGGCCTTTCTAAACATGCTATAAAAAGGCTCTTTGCCTAATGACCTATCATCTCGCGTTGTATTAGGTTTTTTCTTCATTTTGCTTTAGAATTtccagaatcttGTAAACTCCATATCTTTTGATATATTAATTATTTTTTGTTTCTTCTTTGTATTATCTTGCTCCTTAGATAATTATATATCTAGTTATGCATAATTAAGAGATTTCTGGGTTTGAGTTCTTAATTATGTTTGTAAGATCTGAGTAGATTCTTAAGGTTTTGGGGATGAGTTAGAAGTGTAGGTGAAGAAATTTACGTACCTACGTTGCCCATAGGTAAAAAGGTTTAAATTTCCTTCTGGATTAGTGTATATAACATCAATCCCATTCTGATCAAGTGGTGATTAGTTCTCAGGCTTCCACGCCCAAGAGGTGTTCGATGGAATgccggataatctaataccagagaatttcatgtctagcccaagagaTTGGTTGTCTAGAGTGTTATTTGACATTAATGAGTTGAGTCTTAATGCCTCTTCTTTTCATGTTTCATCAACTGGAAGTTGAGATTAGGAAGTGATTTGAATTTGATAGCCTTTGTCAAGAGAttgaactggttagcttatgagcttgttgtctaggaaacaacattatttgtgtttgattgatttagcaacttagtgaacttaaagatctccacTGAAGTCACCATCTCATCCCCAGAACCTCCCTTTAATTGATTGATTTACCCTGCTTCATTTTTGTTCTTGCATTTCTAGTTCACTACATGTTCTTATTTTTGTAGATTCATTTCTGTTTTAGTTCAATTTTGTGTCTTGCTTAGGTTCTGCTTATTTTAAATTCAGTAGATGATAGTTTAAAACCTTTCTTgcttggcttaaCTTGTTAAATATTGATTGCATCTGAACTATATGCACGCGTCCTTATTGATCGATAAAGCCCTTTATACTACAATTATACTAGGTGATTGATACCAAGAGCTTTAGAAACGTGTTATCAATTTGGCGCCGCTGCCGTTTGGACGTTTAAGTTGTTCCAGTTTGGATTTCAATTTGCAAGATTAAGTTCTATATCATTTTTACTTTGAATATTGATTTTTTTTTGCTTGTTTACTTGCATGTCTTGCTTTACAGGGACCACTCGATCAAGCAATCGACCA

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1321

Start:

6713  

End:

8033

Strand:

+

>Scaffold11390_LTR-Gypsy_86

GTTCGATTCTGTGTATGCACACAAGGTCTAATGACAAGCAAAATCTTCTCAGGTAGCTCGACAACATTGACAGACTTCATAAAGCTTTGAGACAGCAGAGAGATCAGTTAAGAAAGGAAACAACAGACGTTGAAATGGATCCTCAACAAAATGTGAATCACAGGCGTGCAACACCCATAGGTACAGGAGATGCTCCTAATAGCCATGTCTAGAGGTTAGGGATAATACCACCGGCTGTTCAAAATAATAATTTTGAAATCAAGAATAGCCTCATATCCATGGTACAAAGCAATAAGTTTCACGGTTTACCAATGGaagacccgttGGACCACTTGGACGAGTTCGACCGCTTTTGTGAATTAACCAAGATCAACGGCATAAGTGAAGGCGGATTCAAGCTTCGCCTCTTTCCTTTCTCACTCAGAGACAAGGCTCACCAATGGGAAAAAGGTTTGCCTGCTGGTTCTATAACCACTTGGGAGGAGTGTAAGCTTGCTTTCATATTCAAGTTCTTTTCCACCTCCCGCATAGCCCATCTTAGGAATGAAATCTCAAGTTTCGCCCAGATAAACAGTGAGACTTTATGTGAAGCATGGGAACGGTTCAAGGGATATCAATCTCAATTCCCACACCACGGTTTCACTAAGGAGTCCCTTCTCAGTACTCTATACAGGGGAGTGCTTCCTAAGATACGCATGTCGTTCGACAACGCAAGTCATGGAAACTTCTTAAACACATATGTGGATGAgggatgggagcTGGTTGAGAACCTTGCCCAATCTGATGTGAATTACAATGAAGAGTATGATAGAACCAATAGGGGAAGCTTAGATCATGAAGAGAAGTATAAGAAGGACTTCAAGTCTTTGAGTGATAAGATTGATAGGATACTCATTGCACAGTAGAAGACTGTTCACTTCGTCTCCGACGAGGAGCAATTCCAGCAAGAAGGGGAAggtgatggtaCCGAGGAAGTTAGTTACTTGAATCAAGGAGGATTTCAAAAAGGTTTCACAAACTACAAGGTGAACCCAAACCTCTCCTACATATACAGTAACGTAGCAAATCCTCAAGACCAAGTTCCCTTCAATCAACAACAAGGATTTgtccccaagcaACAATTCCAGCAAGTTTACTCAGCACCTCCACCGAGTTTTCAACTGCAGCAAATGACATCACCACAGGATATTAACTTGAACATAATAATTTAGCAAATGGTACAAAGCCAAGCTACATTGGCCCTGGAAACATCGAAGAAGCTAGCTACAAttcaaggccaaATGACATCTAATTACAATGACCTAAATTTGAAGTGCGATGC

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

140

Start:

8057  

End:

8196

Strand:

+

>Scaffold11390_LTR-Gypsy_87

TAGAAGGTGTTCGATGGAATGTTGGATAATCTAATACCAGAATTTCATGTCCATCCCAAGAGATTGTTGTCTAGAGTGTTATTTGACATTAATGCCTATTCTTTACATGTTTCATCAACCAGAAGTTGAGATTAGGAAGT

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

267

Start:

13672  

End:

13938

Strand:

-

>Scaffold11390_LTR-Gypsy_88

GTTAGATAAGTAACGTTCTAACAAACCGAAGGCCTCTTCGCATTTATCATCCCAAACAAAGTTCTCATTTCCTTTTCTCAACAGTTGATAGAACGACAAACACTTGTTCGTGGATCGGGAGATAAACCAGTTAAGTGCTGCATAGGATAAGTCATAAACAGGAAAGCTTTTATTTGCCGCGGATTTGCTTCAATCCCCCTTTCGGTGACCATGTACCCAAGGAATTCTCCTAAGGGCACTGCAAATGTACACTTCGAGGGGTTCAAC

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1339

Start:

13958  

End:

15296

Strand:

-

>Scaffold11390_LTR-Gypsy_89

GATTTTACCAACATGTCGTCTATATAAACTTCCATAGTCTTTTCCAAGATTTTGGCGAACATACGGTTAACTAGCCGCTGTTAGGTGGCAGTAGCGTTCTACAGTCTGAATGGCATCACTTTGTAGCAATAAGTCCCCCGATCTGTTATAAATGTCGTCTTCTCCTGATCCTCCGGATGTATCAAGATTTGGTTGTAACCAAAAACGTAACCATAAACGTTAACAGCTCGTGTCCCGACGTTGATTCGACTAACCGATCGATGTGAGGTAAGGGAAAACTATCCCTTGGGCAGGCCTTATTCAGGTTGGAAAATCAAAACATTCTCGCGATTTGCCATTCTTCTTCTTGACTATAACCGTATTTTCTAACCACTCCGTGTACTTAACTTTGCGAATTAATCACGCTTTAAGCAAATGTTCCACCTCGGCATTGACAATGTCAGCTCGCTTAGACCCCAATTTTTGTCGCTTTTGCTTAACGGGTTTGAAAGATGGATCGATGTTGAGTTCGTGTGTAATGACGTCCATACTTATGCATGTCATTTCGCATGTCTCCCAGGAAAATGTTGCATTGTTTTCTTTTAGAAAGGCGATCAAGTTCATCTCTAATCTCCGGCTGGAGTCCCAGTCCGATCCTTACACCTTGCTCGGGAAATTTAATGTTGATGCAAATTTCCTCCAATAGGTTGCTGTTTAGCTTCCCCGTAACGGTATTCTTTGCGACCTCAAGTTGTAGTTATTGTTGGATCAGGAGCTTTTGCCCAGTTAAATAGCAACTCCTCGCCATCCGCTGGCTACCCAAAATCTCCGGGACTCCGTCAGGTGTGGTGAACTTGACACACTGGTGGTAGGTCGATGGAACGGCCTTCATTTGGTAAAGCCATGGAGTTCCTAATACGGCGTTTATAGGCTACTGGTCGGTCAAAGACCGTGAACTCTGCCATCTAAGAAACTCCTTGTGCTAAAACGGGAAGTGTTATAGTCCCCAAAGACATAGATGTTTTACTTGTGAAGGAAACCAACGGAGCTAGAGGTCCCATGATATAGTTCTTGCCAACCCCCATTCTCGAGAGCGTATCGAGGAAAATGAGGTCCATCGACCTGCCAGTATCAACTAGGATTCTGCAGACCTCGTGGTTAGCCATATCCAATGATATTACAAGTGCGTTATCGTGAGGAATGTCGAGGGTTTCGGACTCCTGCTCGGGGTAGACTGCAGTTTTCAGCCTTTTAAGAATCGGACTGTTCAACCGTCTTTGGTGGTCCTTTATAGCTCGAATGGAGTTTCGAAACATTAGGTATCCTCCCATGATAACGTTGATTTGCTTTTTCGGTTCCT

Capsella grandiflora (v1.1)

ID:

Scaffold11390_LTR-Gypsy_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

764

Start:

15474  

End:

16237

Strand:

-

>Scaffold11390_LTR-Gypsy_90

CTTGCAGTCCCTTGTTGTGTGGCCCCCAACTTTATAGAGCTCGTAGTAAGAATTATCATCGCCCTCCTCTCGGACTCACTTGTTGCTCGGTAGAGCCCCGTTTCTGCCGCGAGGTACAAACGTCGACTTTGTTAAATATGATTTAGGTCCGCCCTTTGACTGACCCTTATCTACTTAATATGTCAAAGCTCCCGTCCATGGTCCTTGAAAATTTTTCTTGGGTGTAGTTCGAAGTTTGGCTTTGGTACCGTCATATATTCTTTTGCCACGACAGGTTTCTCCTCTTCGGCGACAATCAAGTTTGAAGCTTGATGTAAGGAGTCTTGGATGTTAGAGGGCCAATTGACCATCAGTTCCTCTATGAATCAGGATTCATGCCATAAGCCATTTTTTAGAGCAGATTGTGCCGCTGAGTCAGGAAGGCCTGGAATCTGGACCATAATCTCTTTGAATTTTGTAACATATGATCGGAGTGAATCCCCCGGACCCTGACTAAGGTTCCACAAGTGCGCATCAGTTACTCCGACCCCGATAAAACTCGAGTACTGCTTTACGAAAGTAGTGGACAATTGGGTGAAACTATCGATCGTTCCTTCCCCCAGTGAAACAAACCAAAGGATTGTGGGTCCCGTGAAGGTTTCAGGGAACAACTTAGAGTAGCCCGCGTTTTCTTCGTGGGAATCAAAGTCGACCAGCCCAGCATTAAAGAGGAAAGTTGGCAGGTGAACCTTCGGATCGCCTTTTCCCTCATAACTTTGGAACTT

Capsella grandiflora (v1.1)

ID:

Scaffold11446_LTR-Gypsy_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

82

Start:

22894  

End:

22975

Strand:

+

>Scaffold11446_LTR-Gypsy_91

GGGGTATGTGGAGACATAGTTTCACCATTTTGTACTTCATAAGTTCATTTGTATAAAATTGGACTAAACATTGTTGATTGTT

Capsella grandiflora (v1.1)

ID:

Scaffold11502_LTR-Gypsy_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

200

Start:

36353  

End:

36552

Strand:

+

>Scaffold11502_LTR-Gypsy_92

GAGCTTACTGAAGGCGATAATGTAGATTGTAAATTGAATAGCTCTTTAAGAGCTCTATTGTGCAACGACATGTAAAAGGGGAAACTTTTAGATTGTCACACCAAGATTAAAAGGGTGAAAATGAGTCTTGTTTTGAGACGATTCTCAAGGTTACAATCAAAATTATCATTACATGCTTAGATGAATCTTTATCTTGCTAA

Capsella grandiflora (v1.1)

ID:

Scaffold1157_LTR-Gypsy_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

158

Start:

152859  

End:

153016

Strand:

-

>Scaffold1157_LTR-Gypsy_93

TGATTTTGGTGACAATTTAAGTATTTTTCTCTTTTATATTTCTTGCATAATAATTAATAAAGCTTAATTAATGAGCTATGTCATTTTTAGTTTTAGTCTTTTAGATTTCTATTTTAATAAGGTCAATTGAGCATGAATCTATCTTGCCTAGAAATATC

Capsella grandiflora (v1.1)

ID:

Scaffold1158_LTR-Gypsy_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

151

Start:

204  

End:

354

Strand:

-

>Scaffold1158_LTR-Gypsy_94

ttgattgctataagtcgaccgccttgcgtagcttgcactcgataacaaagcagtttctggcgtcggccatgtttcctttaattgtgaagatgatgctcggcgtCGGTAGCTTGACGTAGTGGTGATAGGTTGAGGAGATAGCTTGCATATG

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

809

Start:

4093  

End:

4901

Strand:

-

>Scaffold11603_LTR-Gypsy_95

ATACCATCTCACTCTCGGGTCGTCACCCTCGAGCACTCCTGGTATCCGGGGAACTAATCATCTCCTATGAGAACTAATCATCTCATATGCCACTCTTAGGTCGCAACCTTCGAGTCAGCGGTACACCTGGGGAACTAATCATCCCCTTCATGGAACTAATCATCCCCTCAAGAGAACTAATCATCTCTCGTGAGCAATTGTCTAAACGTCTACCAGCATCTCCTAACCAGAACTACCTCTCATGGCCTCTGTACAACACCGCAATGTCATATCCGCCACCCACATTCCCTCAGTGGGATATCTTCTCGACCCTGACCCTCTTCTCATGTCAGCTTTTAAACACCCCGCTCTTTAGGGTGTTTACACATACTTTCCTAAAATAGACAAGTCTTAACTATTCATAAAACTTTCTTATTTAGGAAACTTTTCTACGCACTATTATGAACTCCAAAATCATAAGAAAAATTCATCTTATTAATTCTCCAAAATGTAATAATGTTACAGGACCAACAAAATACATAATGAGAAAATAAGAACTACAACAATATCTGAAATTGGAACCTAGAATGATAAGCTTATTCCTCGGCTTGTTTCTCAAACCACTTCCTGAATCTAACTTTCATTCTCGCCTCAGGTTCCCAAGTCACCTCCaaaatcctatcacagttccactggactctcatcaaaagaatcttcttacgcCGAAGTTCCTTAACCCTCCTCTCGAGAACCCTCACTGGTCTCACCTCTAGGGTCATGTTGAGCTGAAAATCTGCAGGAATCTTAGCCAACACCTCATCATCCTTATG

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

170

Start:

4907  

End:

5076

Strand:

+

>Scaffold11603_LTR-Gypsy_96

TGATAAGTCTGTATTTCATCACTTTTTGAGCATGTATTCATCATCTTTTcatcatcattcacttgttgattcacaccatatttatcactttctgcatgatatACATACATAAGTAGGTTTTGTGCATGTCTTGCATACATTCTTGCATTTGGAGTGTTATCATGTGTTTT

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1049

Start:

6075  

End:

7123

Strand:

+

>Scaffold11603_LTR-Gypsy_97

CCTGAACCGCTTTTTCCTTTGTCGTTTTATGTTTTAGGGTTTTTCCTAACATTACTATAAATAGGTCTCTTTTGGCATTACCCAAGGGATCGAGTTTTTATCCTTAGGTTTTTGTTGTTAGCCACCAAAACAATCTAGAAAATTATAATTCAGATTTTTTTTAAGTTATTATGATTTTGCACTTAGTTCTTTGATCATTGTTATTTATCTTCCTGTCATCTTTATTATTATGTATGTTTTGAACAATTCTAAGTTTATGATGTTTAACATGTTTTTTGTGTCTGAGTAGTGTTAGGGTTCTTGAGGATGGGATATATTAGGTAGAGAATGTTAGTTTGCTATAGTGTTTATGTTAGATCCGTTTTGTTTCCCTTCTCGATTAGAGTTTTATTAGCTAgttcttctctGATCAATTGGAACTAGGTCATAGACATTTCATGCCCCAAAGGTGTATGATGAAATATCTGAACCAACTAGTGCCAGAGATTTACATGCTTAACCCAagagattggtTGTCTAAGATGTTTATTGACATTAATGAGCTGCTCCTTCACGCCTGTTTACTACATGTTTCATCAATTAGAATTGAGATTAGGAAGTGTTGTAAACTTGATAGTTCTGCCAAGAGATTGGATTGACTAGTATTAGAAGTTCATTGTTTAGGAATTAGTATGTTTGCAGTTTGATGAACACCCTAAGTAGATAGCATGCTCCACCTACATCAATAACCtcatcctcaggATCTTCTATCCATTTGTGCTGTCTGTTTTATTCACTTGCTATTTACTTGTTCTGCTCTGTCTTCTTGCTAGTATTGATAATCATTACgttttagcttaTGCATGATAGTCTATGTTTTTAGCCTTACATTTATCGCATGTTTAACATGTTTGCCTAGGATGTTAGAAAACCAAAATCATTTATGCTTGGCTTGACTTAATCatttctgatatatcttgattggcatcacaccttattggattgatacctattgtactgcaatgacatgatagtactctagggtaattggtagtaaaatcctagtATCA

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1033

Start:

7128  

End:

8160

Strand:

-

>Scaffold11603_LTR-Gypsy_98

CACTTCTTAAGCATCGACACATGAAAAACCTTATGAAATGCCTGCATAACCTCAGGTAGCTCCAACCGATACGCAACCGGTCCAACCCGCTCAACAATCCTGAAAGGGCCAGTGTACCTTGGACTCAACTTAGTCTTGGTAAGGGACCTATTAGGAACCCGCAACATAGCGATCTTGAGATACACTCTATCTCCAACCTCAAACGCAGCTCCATACGCCTCTTATCGGCATAACTCTTTTGCCGATCCTAAGCTTGCTTCATGTTCAGCTTCAATACTCAGATCTTCTCTAATGTTTCCTAAACAAAATCCGCACCCAAAATGCTCCTCTCCCCCACCTGGCTCCAGCATAATGGTGTTCTGCATGGCCTCCCATACAAAGCTTCGAAAGGAGCCATGCCAATACTCACTTGGTAGCTATTGTTGTAAGCAAACTCTACCAAGCTCAAGCGGTCCACCCAATGACCACCCCAATTCAGCACACATCCTCAACTAATCCTCGAGCGTTTGAATAGTCCTCTCGGATTGACCATCTGTCTGAGGATGGTACGCTGTATTCAAATGCACATTCGTGCCCATCTCCTTCTGAAACGCCCCCTAGATCGCATAAGTGAACTTCGCATCCCGGTCTGACACAATACTTGCCGAAACCCAATGAAGTTTCACTATCTCCTGCACATACTTCTTAGCCAAAACCGCCGCTCCACTAGTCTTCTTAATGGCCAGAAAATGTGCACACTTAGTCAACCGGTCAACAACGACCCAAATAACATCCTTAAACCGAGAACCAGGCAGTCCCACTACGAAATCCAACTCTGCAACAAACCGCTCGGTACCTGATACTCAACCTTCACTAACTGGCACACATCGCACTCTGCGACCCAGTTAGCGACATCTTTCTTCATCTCGACCCAATGATAATACCGCTTAAGATCCCGGTACATCTTAGTCGCTCTCGGATGAATCAAAAACATACTAGCATGAGCCTCCTTCAGAAtctcccgcctcAAACCCTCATCTTTAGGCACACAAAC

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

108

Start:

16867  

End:

16974

Strand:

-

>Scaffold11603_LTR-Gypsy_99

GCTACTGGAGTGCCTATAGAGTGTTGGTGTCGATCGACATCAGTGGTGGGTgtcgcttgacaCCAACGTTTTGTTCCGCGAGGATAGTTGCGACTCGCGATCGACACC

Capsella grandiflora (v1.1)

ID:

Scaffold11603_LTR-Gypsy_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

170

Start:

17041  

End:

17210

Strand:

+

>Scaffold11603_LTR-Gypsy_100

TTATTACTGCTTGTGTGTATAGCCCAATAGTTGGGGTGAGTGCCTCACTAAAATAAAGTATTTATGAAAATATGTATGCATCTCTTTTTGTGATGCAGGTAAAAGAGAAGGTGTGACTGTGGAATCATGGGGAGGAGAAAAGAATGATCTAGAGGCTCGTTGGATGTTTT