ID Class Order Superfamily Length Start End Strand View
Scaffold12659_SINE-tRNA_21 RetrotransposonsSINESINE-tRNA180976090976269-
Scaffold12659_SINE-tRNA_22 RetrotransposonsSINESINE-tRNA11215697661569877+
Scaffold13083_SINE-tRNA_23 RetrotransposonsSINESINE-tRNA1154474044854-
Scaffold13129_SINE-tRNA_24 RetrotransposonsSINESINE-tRNA10512503251250429+
Scaffold13158_SINE-tRNA_25 RetrotransposonsSINESINE-tRNA145987861988005-
Scaffold13175_SINE-tRNA_26 RetrotransposonsSINESINE-tRNA157213919214075+
Scaffold13404_SINE-tRNA_27 RetrotransposonsSINESINE-tRNA141561245561385+
Scaffold13404_SINE-tRNA_28 RetrotransposonsSINESINE-tRNA16211704711170632-
Scaffold13404_SINE-tRNA_29 RetrotransposonsSINESINE-tRNA16311989231199085-
Scaffold13404_SINE-tRNA_30 RetrotransposonsSINESINE-tRNA14412015691201712-
Scaffold13404_SINE-tRNA_31 RetrotransposonsSINESINE-tRNA13312291781229310-
Scaffold13671_SINE-tRNA_32 RetrotransposonsSINESINE-tRNA127492113492239+
Scaffold13671_SINE-tRNA_33 RetrotransposonsSINESINE-tRNA13525860042586138+
Scaffold15654_SINE-tRNA_34 RetrotransposonsSINESINE-tRNA112180826180937+
Scaffold15697_SINE-tRNA_35 RetrotransposonsSINESINE-tRNA164401317401480+
Scaffold15697_SINE-tRNA_36 RetrotransposonsSINESINE-tRNA142601657601798+
Scaffold15697_SINE-tRNA_37 RetrotransposonsSINESINE-tRNA9117570021757092-
Scaffold15774_SINE-tRNA_38 RetrotransposonsSINESINE-tRNA119878277878395+
Scaffold15774_SINE-tRNA_39 RetrotransposonsSINESINE-tRNA8812808481280935-
Scaffold15774_SINE-tRNA_40 RetrotransposonsSINESINE-tRNA12120104142010534+

< 2 3 4 5 6 > Total 10


Boechera stricta (v1.2)

ID:

Scaffold12659_SINE-tRNA_21

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

180

Start:

976090  

End:

976269

Strand:

-

>Scaffold12659_SINE-tRNA_21

TTTTTTTTTTTTTAATATTAGGAGGTTCAGTGCTCGTAGGCCTGTACGTCCCCTAGGACGGAGCCCAAACCAGATTAAATTGCTCTCCTTCGGAGAGAGACCCCTTCTAACGGAGAATCGAATCCAAAGCGCAACAGGATACACTCATGCGCTTTACCACTGACCTATCACACCGTTGGT

Boechera stricta (v1.2)

ID:

Scaffold12659_SINE-tRNA_22

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

112

Start:

1569766  

End:

1569877

Strand:

+

>Scaffold12659_SINE-tRNA_22

CCGGGTTCGATTCTCCGTTGGAAGAGATCTCTCTCCAAAAGAGAGAAATTTAATCTTGTCTGGTCCCGTCAAAGGGACGTACAGGCGTACGGATCCTGAACTTCCAGGTATT

Boechera stricta (v1.2)

ID:

Scaffold13083_SINE-tRNA_23

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

115

Start:

44740  

End:

44854

Strand:

-

>Scaffold13083_SINE-tRNA_23

GGAGGTTCACGGCCCGTAGGCCCGTACGTCCACCCAGAGTAGGGCCCAGACCATGTAATATAACTCTCTTTTGGGAAAGCAGACCCCTCCCAACGCGAATCGAATCTGTGACCTC

Boechera stricta (v1.2)

ID:

Scaffold13129_SINE-tRNA_24

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

1250325  

End:

1250429

Strand:

+

>Scaffold13129_SINE-tRNA_24

TGTGTTCGATTCACGTTGGGAGGGATCTATTCTACAAAAGATAATATTAACCCGGTTTGGACCCCGCCCCAAGATATACGGACCTACGGTCCCAAACCTCCAGAT

Boechera stricta (v1.2)

ID:

Scaffold13158_SINE-tRNA_25

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

145

Start:

987861  

End:

988005

Strand:

-

>Scaffold13158_SINE-tRNA_25

GAAGTTCAAACTCATGCGGACCTACATCTGCAGGGTGGAATCCACACCATTTTAAATTCATCTCTTTTGGGGAGAGATCCTTCCCAACGGGAATCGAATCGTGGCGCTTCAAATTCCTAGCAAGGGCTTTTACCATTGGCCCAAC

Boechera stricta (v1.2)

ID:

Scaffold13175_SINE-tRNA_26

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

157

Start:

213919  

End:

214075

Strand:

+

>Scaffold13175_SINE-tRNA_26

ACTAACGAGCTGATAGACCAGTGGTTAAACGCATGGATTGGTCCTGTTGTGCTCCTGGTTCGATTTCTGTTGGGAGAATTCTACTCTCCAAAAGAAAGTATTAATCCGATTTGGACTCCGCTACCAGGAGACGTACGGGTCCACGCCCTCGAACCTC

Boechera stricta (v1.2)

ID:

Scaffold13404_SINE-tRNA_27

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

141

Start:

561245  

End:

561385

Strand:

+

>Scaffold13404_SINE-tRNA_27

AGGTCACGGGTTTGATTCGCATTGGGAAAGGTCTGCTCTCCAAAAGAGAGTTATATTACATGGTCTGGGCCCTGTCCTGGGGGGACGTACAGGCTTACGGGCCCTGAACCTCCTCGTCATTAAAAAAAAAAGAAAAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold13404_SINE-tRNA_28

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

162

Start:

1170471  

End:

1170632

Strand:

-

>Scaffold13404_SINE-tRNA_28

TTTTTTTTTTTAATATATAATTAAGAAGTTCAGGGCCGAAGCTCATAAATCCATTAGGCCCAGACCAGTTTTTAATAATTTATTCGTATCAGCCTTTCATTCAATCTTATGACATTTTAGATTATCCTACGATACTTTTCAGTCGACCTATTGACCTTTGGT

Boechera stricta (v1.2)

ID:

Scaffold13404_SINE-tRNA_29

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

1198923  

End:

1199085

Strand:

-

>Scaffold13404_SINE-tRNA_29

TTTTTTTTTTCTTATATATAACTAAGAGGTTCTGGGCCGAAACTCATAAATTTTCTTAAGTTCAGACTGTTCTTAATAATTCACTTGCATCAGCTGTTACTCGATCCTATAACTTCTTAGATTATCCTATGGTAGATTTTCAGTCGAGTTATCGACATCTGGT

Boechera stricta (v1.2)

ID:

Scaffold13404_SINE-tRNA_30

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

144

Start:

1201569  

End:

1201712

Strand:

-

>Scaffold13404_SINE-tRNA_30

ACTAAGAGGTTCTGGGCCGAAACTCATAAATCTCCTTAAGCCCAGACTCTTCTTTAATAATTTACTCGTACTAACTGTCACTCGATCTTGTAACCTCCTGGATTATCGCAGAGTACCTTTCGAATCGAGCTATCGACCTCTGGT

Boechera stricta (v1.2)

ID:

Scaffold13404_SINE-tRNA_31

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

133

Start:

1229178  

End:

1229310

Strand:

-

>Scaffold13404_SINE-tRNA_31

AAGAGATTCTGGGCCGAAACTTATAAATCTTCTTAAGTCCAAACCGTTCGTTAATAATTTACTCGTACCAGCTGTCACTCCATCCTATAACTTCTTGGATTATTCCAAGTTATTTTCCAGTCGAGCTATCGAC

Boechera stricta (v1.2)

ID:

Scaffold13671_SINE-tRNA_32

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

127

Start:

492113  

End:

492239

Strand:

+

>Scaffold13671_SINE-tRNA_32

GAAGTCACGGGTTCGATTCACGTTGGGAGGATCTGTTCTTAAAAAAAAAGTTATATTACATGGTTTGGACTCTGTCCTGGAGAATGTACGGGCCTATGACTCTGAACCTCCTAGTCATAAAAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold13671_SINE-tRNA_33

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

135

Start:

2586004  

End:

2586138

Strand:

+

>Scaffold13671_SINE-tRNA_33

ACCAAGGTGAGGTTAGCCCAGTGGTAAAAATTTTTGCTAGAAATTTGAGGCAGTAAAATTCGATTTTCCTTGGAAGGGATCTCTCTACAAAGATATGAATTTAAAGTGGTGTGGATCCCGTCCTGAAAATGTAGG

Boechera stricta (v1.2)

ID:

Scaffold15654_SINE-tRNA_34

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

112

Start:

180826  

End:

180937

Strand:

+

>Scaffold15654_SINE-tRNA_34

GGCGGTGGCTGGGTTCGAGTGGTCTTGGGAGGAATCTCTCGGCAAAGGGGATGACTTTAACATAGTTTGGATCCCGCTCCGGATATGTAGGGTCCGCAATGGTTTGAATTTC

Boechera stricta (v1.2)

ID:

Scaffold15697_SINE-tRNA_35

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

164

Start:

401317  

End:

401480

Strand:

+

>Scaffold15697_SINE-tRNA_35

ACCAACATGAGGTTGGACCAGTGGTAAAAGCACTTGCTAAGAACTTAAGGCGCCACGATTCGATTTCCGTTGAGAGGAATCTTTCCTCAAAGAGGATGAATTTAAAATGGTATGGATCTCGCGCTGAAGATGTAGGATCCGCATGGATTTGAACATCAGAATTC

Boechera stricta (v1.2)

ID:

Scaffold15697_SINE-tRNA_36

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

142

Start:

601657  

End:

601798

Strand:

+

>Scaffold15697_SINE-tRNA_36

GTTAACCTAGTGGTTAAACCCCTCGATCTACCTGAGGAGGTCACAAGTTCGATCCACGTTGGGAGGGATCTATTCTTCAAAGAAAAGTATTAACCCGGTCTGGATCCCGCCCCAAGAAGACGTACGGGCCTACGGTCCCGAA

Boechera stricta (v1.2)

ID:

Scaffold15697_SINE-tRNA_37

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

91

Start:

1757002  

End:

1757092

Strand:

-

>Scaffold15697_SINE-tRNA_37

ATCAGGAAGTTCATGGTCCATATATCTCCTAGAGCAAGACATACACCATATAATTTAACCCTTTTTTTTTAGAGCAAATCCCTTCCAACGT

Boechera stricta (v1.2)

ID:

Scaffold15774_SINE-tRNA_38

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

119

Start:

878277  

End:

878395

Strand:

+

>Scaffold15774_SINE-tRNA_38

AGAAGTCGGAAGTTCAAACTGCGCTTGGGACGGAGCCATACTACACATTCTGGTCTCCAACTTTGAATATGTACGAGTTTAGGATCATAATCTCTTAATCATGAAAAAAAAACGAAAAA

Boechera stricta (v1.2)

ID:

Scaffold15774_SINE-tRNA_39

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

88

Start:

1280848  

End:

1280935

Strand:

-

>Scaffold15774_SINE-tRNA_39

TCTTTTTTTTTTTTTGATGACTAGGAGGTTCAAGACCCGTAGGCTCGTATGTCCCTCCCCCCAGGTTATGGCCTAGACCATGTAATAT

Boechera stricta (v1.2)

ID:

Scaffold15774_SINE-tRNA_40

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

121

Start:

2010414  

End:

2010534

Strand:

+

>Scaffold15774_SINE-tRNA_40

GGCGGTGGCTGGGTTCGAGTGGCCTTGGAAGAGATCTCTCCCTAATTAAGGGATGAGTTTAACATGGCTATGGATCCCGCCCTGGAGATGTAAGGCTCGAAAGGTTTGAACTCTAGTATTC