ID Class Order Superfamily Length Start End Strand View
Scaffold24399_SINE-tRNA_81 RetrotransposonsSINESINE-tRNA138797756797893-
Scaffold24513_SINE-tRNA_82 RetrotransposonsSINESINE-tRNA157549853550009-
Scaffold24513_SINE-tRNA_83 RetrotransposonsSINESINE-tRNA105665629665733+
Scaffold25219_SINE-tRNA_84 RetrotransposonsSINESINE-tRNA14326930462693188+
Scaffold25301_SINE-tRNA_85 RetrotransposonsSINESINE-tRNA1322421924350-
Scaffold25463_SINE-tRNA_86 RetrotransposonsSINESINE-tRNA138707341707478+
Scaffold25463_SINE-tRNA_87 RetrotransposonsSINESINE-tRNA12213604781360599-
Scaffold25463_SINE-tRNA_88 RetrotransposonsSINESINE-tRNA11133582603358370-
Scaffold25494_SINE-tRNA_89 RetrotransposonsSINESINE-tRNA1436629666438-
Scaffold2570_SINE-tRNA_90 RetrotransposonsSINESINE-tRNA16010408431041002-
Scaffold2570_SINE-tRNA_91 RetrotransposonsSINESINE-tRNA11413568911357004+
Scaffold25993_SINE-tRNA_92 RetrotransposonsSINESINE-tRNA14518508601851004+
Scaffold25993_SINE-tRNA_93 RetrotransposonsSINESINE-tRNA10823012622301369+
Scaffold25993_SINE-tRNA_94 RetrotransposonsSINESINE-tRNA15926676772667835-
Scaffold26326_SINE-tRNA_95 RetrotransposonsSINESINE-tRNA158373905374062+
Scaffold26326_SINE-tRNA_96 RetrotransposonsSINESINE-tRNA9610864211086516+
Scaffold26326_SINE-tRNA_97 RetrotransposonsSINESINE-tRNA18513780221378206-
Scaffold26326_SINE-tRNA_98 RetrotransposonsSINESINE-tRNA17314433801443552+
Scaffold26527_SINE-tRNA_99 RetrotransposonsSINESINE-tRNA110102409102518-
Scaffold26527_SINE-tRNA_100 RetrotransposonsSINESINE-tRNA132403191403322+

< 5 6 7 8 9 > Total 10


Boechera stricta (v1.2)

ID:

Scaffold24399_SINE-tRNA_81

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

138

Start:

797756  

End:

797893

Strand:

-

>Scaffold24399_SINE-tRNA_81

GTCTTACATCTCTAGGGCAAGACCCACACAATTTTAAATTCATCCCTTTTGGATAGAGATTCCTCCCAACGGGAATCGAATCGTGCCGCCTCAAGTTCCTAACCAGGGCTTTTACCACTGGTCCAACCTCACGTTAGT

Boechera stricta (v1.2)

ID:

Scaffold24513_SINE-tRNA_82

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

157

Start:

549853  

End:

550009

Strand:

-

>Scaffold24513_SINE-tRNA_82

GAAATTCAAACCCATGCGGATCCTACATCTCCAGGACGGGACCTACACTATTTTAAATTCATCCTCTTTGGGAAGAGATCCCTCCCAACAGAAATCGAACCATGGCGCCTCAAATTCCTAAGAAGGATTTTTACCACTGGCTCAACCCCACATTGGT

Boechera stricta (v1.2)

ID:

Scaffold24513_SINE-tRNA_83

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

665629  

End:

665733

Strand:

+

>Scaffold24513_SINE-tRNA_83

GGTTTGATTCGCGTTGGGAGGAATCTGCTCTCCAAAGGAGAGTTATATTACATGGTCTGAGCCCTGCCTTGGGAGGACGTACGGATCTACATGCCCTGAACCTCC

Boechera stricta (v1.2)

ID:

Scaffold25219_SINE-tRNA_84

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

143

Start:

2693046  

End:

2693188

Strand:

+

>Scaffold25219_SINE-tRNA_84

GAGACCTTGAGGTCACGGGTTCGATTCGCATTGGGAGGAGTCTGCTCTCCAAAGGAGAGTTATACTACATGGTCTGGGTCTTGTCCTGGGGGAACGTACGGCCCTGAACCTTCTGGTCATAAAAAAAAAAAAAAAATTAAAAA

Boechera stricta (v1.2)

ID:

Scaffold25301_SINE-tRNA_85

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

132

Start:

24219  

End:

24350

Strand:

-

>Scaffold25301_SINE-tRNA_85

TTTTTTTTTTTGATAACCAGGAGGTTCAGGGCCCGTTGGCCCGTACGTCTCCCAGGATAGGGCCCAGACCCTGTAATATAACTCTCCTTTAGAGAGCAGACCCCTCCCAATGCGAGTCGAATCCGTGACCTC

Boechera stricta (v1.2)

ID:

Scaffold25463_SINE-tRNA_86

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

138

Start:

707341  

End:

707478

Strand:

+

>Scaffold25463_SINE-tRNA_86

GAGGTCATGGGTTCGATTCTCGTTGGGAAAGGTCTGCTCTCCAAAAGAGAGTTATATTACATGGTATGGATCCTGCCCTGGGGGACGTACTCGCCTACGGACCCTGAACTTCCTGATCATAAAAAAAAACATAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold25463_SINE-tRNA_87

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

122

Start:

1360478  

End:

1360599

Strand:

-

>Scaffold25463_SINE-tRNA_87

CCTCCGTTAAGGTTTGCATCATTAATCTGCAAAAAACTATATTCTCTGGGAATCGAATCCCAAAATGGATGTAGAGGTATTAATATACCCTCGGTCAACCACTGTACTAAGGGAACTTCCAC

Boechera stricta (v1.2)

ID:

Scaffold25463_SINE-tRNA_88

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

111

Start:

3358260  

End:

3358370

Strand:

-

>Scaffold25463_SINE-tRNA_88

TGGAAGTTCAAACTCTTGTGGACCCTGTATCTCTAGAACGGGACCCAAACTATGTTAAAGTCATCCTTTGGAAAAGATCCCTTCCAAGGTCACTCGAACCCAGCCACCGCC

Boechera stricta (v1.2)

ID:

Scaffold25494_SINE-tRNA_89

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

143

Start:

66296  

End:

66438

Strand:

-

>Scaffold25494_SINE-tRNA_89

AAGTTTAAATCTGTGGGCCCTACATCTTGGGGCGAAACCTATACCATGTTAAATTCATTTATTTGGAGGAGACCTCTCCGAAGTGGCGACTCGAACTGACGACCTCTAAATTCTCTCGGAAATCTTTACCAGTAGAACTAGCG

Boechera stricta (v1.2)

ID:

Scaffold2570_SINE-tRNA_90

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

160

Start:

1040843  

End:

1041002

Strand:

-

>Scaffold2570_SINE-tRNA_90

GGAAATTCGGGGTCCGTAAGTCCATACGTCCCCCTGATGATAGAACTCAGACCGGGTTAATATTTTTTTTAGGAGAGTAGACTCCTCCCAACGGAAATCGAATCAGAAACACAACAGAACCAACCCCTGCGCTTAACCACTGGTCTATTAGCTCGTTGGT

Boechera stricta (v1.2)

ID:

Scaffold2570_SINE-tRNA_91

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

114

Start:

1356891  

End:

1357004

Strand:

+

>Scaffold2570_SINE-tRNA_91

TGGAGGCTATGGGTTCGATTTATGTTGGGAGGGATCTATTCTCCAAAAGAGAGTATTTCCCTGGTCTGAGCTCCACCCCAGGGGTATGTACGGGCCTACGAGTCCCAAACCTCC

Boechera stricta (v1.2)

ID:

Scaffold25993_SINE-tRNA_92

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

145

Start:

1850860  

End:

1851004

Strand:

+

>Scaffold25993_SINE-tRNA_92

TTAGGCCAGTTGTAAAATGCTTTGCTAAGAACTTGAGGCGTCACGGTTCGATTTCCGTTAGGAAGGATCTCTCTCCAAAGGGGATGAATTTAAAATGGTGTCGGTCTCGTCCTGAAAATGTAGGGTCCGCATGAGCTTGAATTTC

Boechera stricta (v1.2)

ID:

Scaffold25993_SINE-tRNA_93

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

108

Start:

2301262  

End:

2301369

Strand:

+

>Scaffold25993_SINE-tRNA_93

CTGGGTTTGATTTTCCGTTGGGAAAGGTTTCTCTCCAAAAAAGAGCAATTTAATCTGGGTTGGATCCCGCTCTGAAGGACTTACAGGTCTCTGAACCTCTTAATATTC

Boechera stricta (v1.2)

ID:

Scaffold25993_SINE-tRNA_94

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

159

Start:

2667677  

End:

2667835

Strand:

-

>Scaffold25993_SINE-tRNA_94

GGAGGTTCGGGGCTCGTGGGTTCGTATGTCCTCTGGTTGCGGAGTCCATACCGGATTAATACTCTCTTTTGGAGAGTAGACTCTTCCCAACAGGAATCGAACCAGGAGCACAATAGGACTAACTCATGCGCTTAACCACTAGCCTATGAGCTCGTTGGT

Boechera stricta (v1.2)

ID:

Scaffold26326_SINE-tRNA_95

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

373905  

End:

374062

Strand:

+

>Scaffold26326_SINE-tRNA_95

GTCGATAGCTCGACTGAAAATATACTCTTGGATAATCCAAGAGGTCGCAAGATTGAGTGGCAGTTAGTACAAGTAAATTATTAAAGGCTGGCATGGTCTGAGCCTAAATGGATGTATGGGCTTCGAGAACCTCTTAGTTATAAAATAAATAAAAACAA

Boechera stricta (v1.2)

ID:

Scaffold26326_SINE-tRNA_96

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

96

Start:

1086421  

End:

1086516

Strand:

+

>Scaffold26326_SINE-tRNA_96

GGCTTCGATTCGCGTTGGGTGGGGTTTGCTCTCCAAAAGAGAATTATATTACATAGTCTGGGTCATGTCCTGGGAAATATACGGACCCTGAACCTG

Boechera stricta (v1.2)

ID:

Scaffold26326_SINE-tRNA_97

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

185

Start:

1378022  

End:

1378206

Strand:

-

>Scaffold26326_SINE-tRNA_97

TTTTTTTCTTTTTTTTTATAACCGGGAAGTTCGGGGCTCTTGCGAACCCGTACATCCTCCTAAGACGGGGACAAGACCATGTTGTTTTTCTTCTTTGGAAAATAATTCCCCTCCCAAGCCTCGAATCCTTGACCTTAAATTTACCGTAGCAACCCTTTTTGCCAAGTGTCATAACGAGTCTTGGT

Boechera stricta (v1.2)

ID:

Scaffold26326_SINE-tRNA_98

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

173

Start:

1443380  

End:

1443552

Strand:

+

>Scaffold26326_SINE-tRNA_98

GCTAGCTCTACTGGTAAAGATTTCCGAGGAAACTCAGAGATCGCCACTTCGAGTCGCCACCTAGGAGGGGTCTCCTCCTTTGCAATGAATTTAACATGGTCTGGGCTCTGCTTCAGGGAGATGTATGGCTCACGGGCTTGAACTTCCTGGGTATACAAAAAAATAAAAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold26527_SINE-tRNA_99

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

110

Start:

102409  

End:

102518

Strand:

-

>Scaffold26527_SINE-tRNA_99

AAGTTCAAATCCTTATGAGTATACATCTCTGGAGCGGGATTCAAAATATGTTAAAGTCATCTCTTTTGAGAAGAGATTTTTCCAAGGCCACTCGAACCCAACCACCACCT

Boechera stricta (v1.2)

ID:

Scaffold26527_SINE-tRNA_100

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

132

Start:

403191  

End:

403322

Strand:

+

>Scaffold26527_SINE-tRNA_100

GAGGTCACGGGTTCGATTTATGTTGAGAAAGATCTGCTCTCCAAAAGAGAGGTATATTACATGGTTTGGACCTTGTCCTGGGGGGACGTACGAACCTACGGGCCTGAACCTCCTGTTCATAAAAAAAAAAAA