ID Class Order Superfamily Length Start End Strand View
Scaffold10040_SINE-tRNA_1 RetrotransposonsSINESINE-tRNA10132011003201200-
Scaffold10040_SINE-tRNA_2 RetrotransposonsSINESINE-tRNA16632719533272118+
Scaffold10058_SINE-tRNA_3 RetrotransposonsSINESINE-tRNA118358005358122-
Scaffold10199_SINE-tRNA_4 RetrotransposonsSINESINE-tRNA134471597471730+
Scaffold10199_SINE-tRNA_5 RetrotransposonsSINESINE-tRNA138824803824940+
Scaffold10273_SINE-tRNA_6 RetrotransposonsSINESINE-tRNA18821215672121754+
Scaffold10273_SINE-tRNA_7 RetrotransposonsSINESINE-tRNA14924133412413489-
Scaffold10273_SINE-tRNA_8 RetrotransposonsSINESINE-tRNA15826602532660410+
Scaffold10689_SINE-tRNA_9 RetrotransposonsSINESINE-tRNA889182191908-
Scaffold10689_SINE-tRNA_10 RetrotransposonsSINESINE-tRNA85606037606121-
Scaffold11793_SINE-tRNA_11 RetrotransposonsSINESINE-tRNA105228466228570+
Scaffold11797_SINE-tRNA_12 RetrotransposonsSINESINE-tRNA841839318476+
Scaffold12008_SINE-tRNA_13 RetrotransposonsSINESINE-tRNA91456546+
Scaffold12302_SINE-tRNA_14 RetrotransposonsSINESINE-tRNA109271936272044+
Scaffold12302_SINE-tRNA_15 RetrotransposonsSINESINE-tRNA118283253283370-
Scaffold12302_SINE-tRNA_16 RetrotransposonsSINESINE-tRNA103966563966665-
Scaffold12302_SINE-tRNA_17 RetrotransposonsSINESINE-tRNA9318912391891331+
Scaffold124_SINE-tRNA_18 RetrotransposonsSINESINE-tRNA1638814988311+
Scaffold12659_SINE-tRNA_19 RetrotransposonsSINESINE-tRNA115214498214612+
Scaffold12659_SINE-tRNA_20 RetrotransposonsSINESINE-tRNA147970307970453+

< 1 2 3 4 5 > Total 10


Boechera stricta (v1.2)

ID:

Scaffold10040_SINE-tRNA_1

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

101

Start:

3201100  

End:

3201200

Strand:

-

>Scaffold10040_SINE-tRNA_1

GTTCATGGTCCGTAGGCCCGTACGTTTCCTCGTAACAGGGTTTAGACTATGTAATATAACTTTCTTTTGGAGAACAGATCCCTTCCAACGCGAATTGAACC

Boechera stricta (v1.2)

ID:

Scaffold10040_SINE-tRNA_2

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

166

Start:

3271953  

End:

3272118

Strand:

+

>Scaffold10040_SINE-tRNA_2

GTCGATAGCTCGACTGGTAAGGTATCCTGAAATTTTTTAAGAGATTACTGGATTGAGTGGCTGCTGGTACAGACATAAATATAAAACGCTGACTCGGATCTTTGGAGATGTATGGGTCCCGGCCCGAAACTTCCTAGTTTACAAAATAAAAAAAAAGTAAAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold10058_SINE-tRNA_3

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

118

Start:

358005  

End:

358122

Strand:

-

>Scaffold10058_SINE-tRNA_3

ATATCTAGAAAGTTTAAATCCGTGGGCCCTATATTTTTCTGAGGCGAAATCTAAACCATGTTAAATTCACTTTTTTGGAAGAAACCCCTTCTAGGTGGCGATTCGAACTAGCGACCTC

Boechera stricta (v1.2)

ID:

Scaffold10199_SINE-tRNA_4

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

134

Start:

471597  

End:

471730

Strand:

+

>Scaffold10199_SINE-tRNA_4

AGTGGTAAAAGCCCTTGCTAGGCGCCACGGTTCGATTCCTGTTGAGAGGGATCTCTCCTCAAAGGGAATAAATTTAAAATAGTGTAGGTCCTGCTCTGGAGATGTAGGGCCCGAATAGGTTTGAACTTCGAAAT

Boechera stricta (v1.2)

ID:

Scaffold10199_SINE-tRNA_5

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

138

Start:

824803  

End:

824940

Strand:

+

>Scaffold10199_SINE-tRNA_5

GTGGAAGCCCCTTAGTCCAATGGTTAACCAAATGGTTCATTAATGTTTCTACACCAGAAGGTTCGGGGTTTTATTCCAAGAGGATGCAATATCTGCAGATTCATTGAGGCAAATTTATAAGGATCGTTGTAGAATTAT

Boechera stricta (v1.2)

ID:

Scaffold10273_SINE-tRNA_6

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

188

Start:

2121567  

End:

2121754

Strand:

+

>Scaffold10273_SINE-tRNA_6

ACCAAAGGACGTTAGCTCTACTGGTAAAGATCTCCGAAGGAATTCAGAGGTCGCCAGTTCGAGTCGCCACCTGAAAAGGATCTCCTCCAAAAAAGTGAATTTAACGTAGTCTGGGCTCCGTCACAGGGAGATGTATGGTCTACGGGCTTGAAATTCCTGGATATACAAAAAAAAAACAAACAAAAAAA

Boechera stricta (v1.2)

ID:

Scaffold10273_SINE-tRNA_7

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

149

Start:

2413341  

End:

2413489

Strand:

-

>Scaffold10273_SINE-tRNA_7

GAAGTTCAAATCCATGCGGATCCTACATCTCCAGGGCGGAATCCACACCATTTTAAATTTATCCCTTTTGGGGAGAGATCTCTCCCAACGAGAATCGAATTGTGGCGCCTCAAGTTCGGATTTTTACCACTGGCCAACCCCACGTTAGT

Boechera stricta (v1.2)

ID:

Scaffold10273_SINE-tRNA_8

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

158

Start:

2660253  

End:

2660410

Strand:

+

>Scaffold10273_SINE-tRNA_8

ACCAACGACGAGTTGGCCTAGTGGTTAAACCCCTCGATCCATCTGAGGAGGTCACATGTTCGATCTACGTTGGAAGGGGTCTATTCTCCAAAAGAGAGTATTTATCCGGTTTGGACCCTGTCCTAGGGGACATACGGGCCTATGAGCCTCGAACCTCC

Boechera stricta (v1.2)

ID:

Scaffold10689_SINE-tRNA_9

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

88

Start:

91821  

End:

91908

Strand:

-

>Scaffold10689_SINE-tRNA_9

TTGTTTGTTTTTTTTTTTTTTTGATAACCAGGAGGTTCGGAGCCCATGTGGGCTCGTACATCCTTCCAGGACGGGGACAGGACCATGT

Boechera stricta (v1.2)

ID:

Scaffold10689_SINE-tRNA_10

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

85

Start:

606037  

End:

606121

Strand:

-

>Scaffold10689_SINE-tRNA_10

TTTTTTTCTTTTTTTTTATGACCATGAGGTTCAGGACCCGTAAGTCCGTACATTCTCTCAGGCAAGGGCCCAGACAATGTAATAT

Boechera stricta (v1.2)

ID:

Scaffold11793_SINE-tRNA_11

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

105

Start:

228466  

End:

228570

Strand:

+

>Scaffold11793_SINE-tRNA_11

GGGTTCGATTCGCGTTGGGAAGGGTCTACTCTCCAAAAGAAAATTATATTACATGTTCTAGGCCCTGCCCTGGGGGACGTACGGACCTACGGGTCCTGAACCTCC

Boechera stricta (v1.2)

ID:

Scaffold11797_SINE-tRNA_12

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

84

Start:

18393  

End:

18476

Strand:

+

>Scaffold11797_SINE-tRNA_12

CTCCTTGGCCCAATGGTTAAGATTTTAAGATTTTAAAAGCTTTTACACCAGATCTGGGGTTCGATTCCCAGATAACATAATTTT

Boechera stricta (v1.2)

ID:

Scaffold12008_SINE-tRNA_13

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

91

Start:

456  

End:

546

Strand:

+

>Scaffold12008_SINE-tRNA_13

TGGAAATTTCTTGGCCCAATGGTTAACGGTTTAAAATGATCTATACTAAGTATGAGGTTTGATTATCAGAAATTGCATTTTATTGCAGGTT

Boechera stricta (v1.2)

ID:

Scaffold12302_SINE-tRNA_14

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

109

Start:

271936  

End:

272044

Strand:

+

>Scaffold12302_SINE-tRNA_14

GAGGTCACGAGTTCGATTCGCGTTGGGAGGGGTCTGCTCTCCAAAAGAGAGTTATATTAAATGGTCTGGCCCTGCCGGGGATGTACGGACCTACGGGTCCTGAACCTCC

Boechera stricta (v1.2)

ID:

Scaffold12302_SINE-tRNA_15

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

118

Start:

283253  

End:

283370

Strand:

-

>Scaffold12302_SINE-tRNA_15

TCTTTTTTTTTTTTTTTATGATCAGGAGGTTTAGGGTCCGTAGGCCCGTACGTCCCCATGACAGGACCCAGACCATGTAGTATAATTCTCTTTTGGAAAGCAGATCCCTCCCAACGCG

Boechera stricta (v1.2)

ID:

Scaffold12302_SINE-tRNA_16

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

103

Start:

966563  

End:

966665

Strand:

-

>Scaffold12302_SINE-tRNA_16

AAATTACTCTTTTTTGGAGAGTAGAACCCTCCCAAAGTGATCGAACCTGTGACCTCCTCAAATGGATCGAGGAGTTTAACCACTACGCTAACTCGTCGTTGGT

Boechera stricta (v1.2)

ID:

Scaffold12302_SINE-tRNA_17

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

93

Start:

1891239  

End:

1891331

Strand:

+

>Scaffold12302_SINE-tRNA_17

GGAGGGGTTTTCTCCAAAGGAATGAATTTAACATGATCTGGAACCTGCTCTAGGGAGATGTAGGGTCCATGGACATGAACTTCCAGGATATTC

Boechera stricta (v1.2)

ID:

Scaffold124_SINE-tRNA_18

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

163

Start:

88149  

End:

88311

Strand:

+

>Scaffold124_SINE-tRNA_18

GTGGAAACTCCTTGGTCCAATAGTTAACTAAAAGTCAATTAATATATTGTATACCATATTTGGAGTTCGATTCCTACAAATTGCAAATTATTGCAGGTTAATGGAGACAAATCTATCGGAAATCTCTAACTTAGTGTAAATAGAGTCGTTTGTCGTGATCCCA

Boechera stricta (v1.2)

ID:

Scaffold12659_SINE-tRNA_19

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

115

Start:

214498  

End:

214612

Strand:

+

>Scaffold12659_SINE-tRNA_19

GAGGTCACGGGTTCAATTTGCGTTGGGAAGGGTCTGCTCTCCAAAAGAAAATTATATTACATGGTCTGGACCCTATCCTAGGGAGACGTACGGGCCCTACTGACCTTAAATCTCC

Boechera stricta (v1.2)

ID:

Scaffold12659_SINE-tRNA_20

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE-tRNA

Length:

147

Start:

970307  

End:

970453

Strand:

+

>Scaffold12659_SINE-tRNA_20

GTTGGGCTAATGGAAAAAATCTTTGCTAGGAACTTGAAGTGCCACGGTTCGATTTCCGTTGGGAGGGATCTCTCTCCAAAGGGGGATGAATTTAAAATGGTGTGGTTCCCACCCTAGAGATGTAAGATCCGCATGGGTTTGAACTTC