ID Class Order Superfamily Length Start End Strand View
Scaffold10040_LTR-Gypsy_81 RetrotransposonsLTRLTR-Gypsy116673842673957+
Scaffold10040_LTR-Gypsy_82 RetrotransposonsLTRLTR-Gypsy655673982674636+
Scaffold10040_LTR-Gypsy_83 RetrotransposonsLTRLTR-Gypsy580683416683995+
Scaffold10040_LTR-Gypsy_84 RetrotransposonsLTRLTR-Gypsy170684168684337+
Scaffold10040_LTR-Gypsy_85 RetrotransposonsLTRLTR-Gypsy344685150685493+
Scaffold10040_LTR-Gypsy_86 RetrotransposonsLTRLTR-Gypsy1578685852687429+
Scaffold10040_LTR-Gypsy_87 RetrotransposonsLTRLTR-Gypsy1361687518688878+
Scaffold10040_LTR-Gypsy_88 RetrotransposonsLTRLTR-Gypsy664691485692148-
Scaffold10040_LTR-Gypsy_89 RetrotransposonsLTRLTR-Gypsy209692408692616-
Scaffold10040_LTR-Gypsy_90 RetrotransposonsLTRLTR-Gypsy1745692617694361-
Scaffold10040_LTR-Gypsy_91 RetrotransposonsLTRLTR-Gypsy265694474694738-
Scaffold10040_LTR-Gypsy_92 RetrotransposonsLTRLTR-Gypsy1383694738696120-
Scaffold10040_LTR-Gypsy_93 RetrotransposonsLTRLTR-Gypsy2632696443699074-
Scaffold10040_LTR-Gypsy_94 RetrotransposonsLTRLTR-Gypsy269699328699596-
Scaffold10040_LTR-Gypsy_95 RetrotransposonsLTRLTR-Gypsy137699983700119+
Scaffold10040_LTR-Gypsy_96 RetrotransposonsLTRLTR-Gypsy104700948701051+
Scaffold10040_LTR-Gypsy_97 RetrotransposonsLTRLTR-Gypsy507704734705240+
Scaffold10040_LTR-Gypsy_98 RetrotransposonsLTRLTR-Gypsy119705419705537+
Scaffold10040_LTR-Gypsy_99 RetrotransposonsLTRLTR-Gypsy215705560705774-
Scaffold10040_LTR-Gypsy_100 RetrotransposonsLTRLTR-Gypsy387706302706688-

< 5 6 7 8 9 > Total 675


Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_81

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

116

Start:

673842  

End:

673957

Strand:

+

>Scaffold10040_LTR-Gypsy_81

CTTGAAGGAATGTTGACTGGCTCCGGTGTTGGCCTAACCGGGCTTTAAGGAGCCAAATGTGATTGATGCAGATGCCTCAAGGCTAAGTTTGGGTTGTGCTTTAATGCagcatggga

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_82

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

655

Start:

673982  

End:

674636

Strand:

+

>Scaffold10040_LTR-Gypsy_82

AGAGATGTTGTGGGCTTGGTGAGTATAATTAGTACTTGTGCTATGTGTGGTTTCCGATAAGTGAGAACCGTTGAGGTTTAAAGCGGTTACCCAGGCTGATATTTTGAGAAGAGcgcgatgtgctcaaaggaaaaaaTGAGAATTAATTAGGGCTTCTAAGGACAAGAAGTCCGAGTATTGGGTTCTTAATAATGAAACGACCCTTGGGAATGGTCGGGTTGTGTGCCGAATGATGAGGAGTCGAGGAGAGATATTCTCTGAGAGGCACATCAGGGTCGATTCTCTACTCATCCCGGGGCGACGAAGATGtaccgagacttgaagcggtactatcagtgggttgggatgaagagaagtgcagccaagtgggtggctagtcttgagactcactaattggtgacaattgagcatcaagtcccgagcgggttattacagagtttacccattcctgagtggagttgggataggagtacgatggatttcgtagttgacttaccgctttctcgggacaaggatgctatcagggttattgtggatcgtttaaccgaGTCCGTTCACGTTCTCGCCATAAGAAAGTCAGGTGGAACTCGAGTTTTGGTGAGGAAGTACATCAGTGGGTTGGTGTGGTCACATGGTTCACCTATGAGTATAGCGT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_83

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

580

Start:

683416  

End:

683995

Strand:

+

>Scaffold10040_LTR-Gypsy_83

CAAAAACCGAGCTGCTATTTGTCCGCCAGAGATTCAGAGGCAGGACGATGAGATCAACTCTCAATTGATAGCATTAATAAAGCAACATCAATTTCATGGGTTAAATGCTGAAAACCCAATGGATCACATCGAAAATTTCAAAGATATTTGCAACACCAGAAGATCAAATGGTCTGCCCGCTGACTACCTAAAGTGCAAGCTCTTTGCATTCTCCCTAGCAGAAAAGGGATTAAGTTGGCTTAAGGCACTTCCAACTGGCTCTTTGAGGACTTGGAATGAACGTAGAGTTGCCTTCATAGACCACTTCTACACCAAGTCTAAGACTGCTTCCTTGAGAAATAAAATCACCACTGAACAACATCGGGGGAGTCTTTGTGTGAAGCTTGGGAACGGTTCAGAGAATATCAAAGAGAGTGTCCTCATCATGGATTTTCAGATGAGCAGATCCTCATCATCTTCTCTGATGGAGTAAATTGGGACTACAAGAATGCTCTCAATACTGCTAGCAATGGTGATTTCATGACAAAGACTATAGCTGGAGCATACAAGCTGATTGAGAACTTGGCTACAAGTTCCAACA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_84

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

170

Start:

684168  

End:

684337

Strand:

+

>Scaffold10040_LTR-Gypsy_84

AGAAGAACTCGACGAAGTGAACTACGTTAGTGGACAAGGGTTTGTACAAAACAGAGGCTTCAaccaaggtttCAACCAGAACTATAGAAGCCACCCTAACCTATCTTACAGGAGCACAAACATCGAGAATCCTCAGGATCAGATCTACCCATAGCAAGGAGCAGCTCAAG

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_85

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

344

Start:

685150  

End:

685493

Strand:

+

>Scaffold10040_LTR-Gypsy_85

GAGTGTAGTGCTGTTCTACAAAAcaagacactcAAGAAACTTGGAGATCCTGGGCGTTTTGTTTTATCTGTGCAGGTAGAAGCCATGAACTTTCCATGCTCCTTATGTGATATGGGTTCTAGTGTCTATTTGATGCCATATTTTGTGGCGAAGCGATTGGGACTAACAAACTTCAAACCAACCAAGATCTCTTTTGTGTTTGCTGATCGTTCGCTGAAGCTGCCGGTTGGAGTTTAGAAGATCTTCAAGTGAAGATTGGCAATGTGGTAGTTCCTGCAGATTTTgtggttcttgaactagAAGAAGAGCCAAGGGATCCTCTCATTTTGGGTAGGCCTTTCTTA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_86

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1578

Start:

685852  

End:

687429

Strand:

+

>Scaffold10040_LTR-Gypsy_86

AAAGCTCCaaaggtagagTTGAAAACACTCCCAACTGGGCTAAGGTATGCATTTCTTGGACCGAAATCTACTTATCCCGTGATCATAATCTCCGCTCTGAATAATGCTGAAATCGCTTTACTTTTTTGCAAACTCAGAAAGTATCGAAAAGCTTTAGGCTATTCACTAGATGATATTCCTGGAATTTCACCTGATCTTTGCATGCATAGGATATATCTAGAGGATGAATAAATGACTTATGTAGAACATCAGAGGAGGTTAAACCCGAATATAAAAGATGTTGTAAAGAAGGAGATCATGAAACTTCTTGATGTTGGGATAATATATGTTATATGTGATAGTACTTGGGTTAGTCCAGTTCATGTAGTCCCTAAGAAGGGTGGTGTAACTGTTGTGCAAAACGATAAGAATGAGTTGATTCCAACTAGAATCGTTTTAGGGCATAGAATGTGCATAGACTACAGAAAATTAAATGCTGCTACTTGCAAAGATCATTTTTCTTTGCCATTAATTGATCAAATGCTTGAGAGACTAGCtaaccatccttACTATTGTTTTCTAGATGGTTATTCTAGTTTCTTTTAGATTCCCATCCATCCGGACGATCAAGAAAAGACTACATTTACATGTCCTTATGGTACTTTTGCATATTCGTAGAATGCCATTCGGATTGTGCAATGCCTCAGCGACCTTTCAGCGTTGTATGTTGTCCATCTTCACTGATTTATTCGAAGATGTAATGGAAGTTTTTATGGATGATTTTTCAGTCTATGGCTCATTTTTTTCTGTTTGTCTTTCTAATCTGTGCAAGGTACTAAACCGATGTAAAGAGAAGCATTTCGTTCTGAATTGGGAAAAATGTCTCTTCATGGTCAGAGATGGAATTGTTTTGGGGCACAAGATTTCAGAGCAAAGAATCGAAATAGACAAGGCAAATATAGAGGTGATAGCAAGCTTATAGTCACCTAATTCTGTCAGAGGAATTAGAAGTTTTCTAGGTCATACTGGGTTCTACAAGAGCTTCATTCAAGGCTTCTCGAAGATTGTTAGGCCTTTGATTCAGTTGTTGTGCAAACTTGACAGAGCTTGCCTCGAAGCTTTTCATACTAACTAGGGAGCACTTATTATCGCACCAACTGTACAACCGCCTGACTGGGAGCTACCTTTTCAAGTGATGACTGATGCAAGTGACTACGCAGGGGGAGCTATTTTGGTGCAGAAAAAGGACAAGAAGCTTCATATCATTTACTACGCCAGCAGAACTCTCGATGAAGCGTAACGCAATTACGTGACTACTGAGAAGGAGCTTCTTGCCATCGTTTTTGCCTTTGAGAAATTCAAGTCATATCTTGTTGGGTCTAAGGTCATTGTGCATACAGACCATGCTGCATTGAGATATCTTCTCACCGAGAAGGATGCCAAACTAAGAATGCTACGATAGATACTCTTGCTGCAATAGTATGATCTTGAGATTAGGGATAAGAGAGGGATTGAGAATGGTGTTgcagatcatttGTCTAGGCTGCAAATTGAAGAAGAGGTTCCTTTGGATAATAGTGTACCTGAAGAGACTGTATA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_87

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1361

Start:

687518  

End:

688878

Strand:

+

>Scaffold10040_LTR-Gypsy_87

AACTTCCTAGCTGCagagaaagaacCTGACAACTTTGTTGGGTACCGAAAGAAAAAATTATTCAGAGACATCAGGCACTGCATTTGGGATGACCCATTCCTATACAAGCAATACTCAGACATAATTTTTAGACGTTGCGTCACTGAGGAAATAATTCAAGGTATTCTTTTTCACTATCACAGTTCTAATTATGCAGGGCATTTTGCTACTTACAAGACGGTGTCAAAGGTGCTACAAGTAAGCTTCTGGTGGCCGAATATGTTTAAAGACGCTAATGTTTTTGTCTCTAAGTGTTCTTCATGTCAAAGGCGGGGAAACATTAGCAAGAAAAATGAGATGCCTCAGAATTTCATCCTCGAAGTTGAGGTGTTTGATGTATGGGGAATCGATTTTATAGGTCTTTTTCCTTCGTTGTATGGGAACCAATACATCCTTCTGGCAGTAGACTATGTGTCTAAATGGGTTGAGGCAATGGCTTCACCAACAAATGATGCAAAGGTAGTGCTGCTAATGTTCAAATCTGTAATCTTCCCAAGGTTTGGTGTACCAAGGATTGTAATCAACGATGGCGGTTCTCACGTCATCAACAAAGTCTTTGAGAATTTGTTAAGGAAGCATGGAGTCAAGCATAAGATCACCACTCTTTATCACCCTTAGACGAGTGGACAAGTAGAAGTCTCCAACCGAGAAATCAAGAGCCTTCTATAAAAGACTTTGGTATAATTCGGAAGGATTGGGCAGTTAAGCTAGATGATGCTCTTTGGGCTTATAGGACTGCATACAAAACACCATTGGGAACAACCCCATTTCATATTGTTTGTGGGAAAGCATGTCACCTTCCGATAGAGCTCGAGTACAAAGCAGCATGGGCTGTAAAGTTGTTGAACTTCGACATCAAACCTGCTACTGAGAGACGGTTGATGCAGCTAAATGAGATAGACGAGATTCGTCATTTGGCTTATGAAAATTCAAGGATCTACAAAGAAAGAACCAAAGCCTATCATGACAAGAGAATACTCAACAAGAACTTTGCTCCAAATGATCAGGTACTACTCTTTAATTCTCGTCTAAAACTTTTTCCAGGAAAGCTGAGATCGTGTTGGTCTGGTCCATTCACCGTCAAGTCGGTAAGACCGTATGGAGTTGTAGAGTTGTTGGACCCTGCAGGAGGAGAATTTGTGGTTAATGGCCAATGCCTTAAACCATATCTCGTTGATGCGGTAATCACTAAAGGAGACACCATTCCCCTCGGTGATCCTTCCCATGCCTGGACAGCATAAAAGTCATGCTAATGACTTAAAACAAGCGCTTGGTGGGAGGCAACCCACTCGTATGTGTTTATATTTCTGTTTTATTTTGTT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_88

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

664

Start:

691485  

End:

692148

Strand:

-

>Scaffold10040_LTR-Gypsy_88

TCAATTTCCTTATTGAACTATCATGTCATTGTAGTAcaataaggtatcaatccaaatgggtgcgatattaaccaagaaggatgcaatcaaatagtttaAGTCAAGCCAAGCAAGCTATAAGGTGAGAAACTATCAACCTAAACAGAGACTCCTAGCAAGAAAACAGAGATAATAGGCAACTAGCAAATTAGCAAAGCAAAGACTCCTAGCAATACAGAACGAAAACAGAGCAATAGCAGAGGAACAGAAATCAATCAAGCAAGAGAAGCTCCTAAGGATGGGGTAATTGACTtggtgtatcctcttAATCTACCTAGGTGGTTTAACAAAACTCAAGCAAATCTATTCCCTAGACAACAAACTCATAAGCAGCTAAATCCACTCTCGTGACCGATAACCTTAAGCTAATCCAGTTCCAGACCTAATCCCTTAGTGAAATCTAGACTAACAGgcattaagattcagtttgttaaagccaataaacaccctaaacatctaatcccttaggctaggaatgtaaatctctggaattagttttgtcaggcatttcatcaaacactttctgggtgtggaaatacctaagttctaattccaattgatcagagagaaattaGCATTAAGAACACTAATCCAGAAGGGAAATCAAACAATCTACACTTAAACA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_89

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

209

Start:

692408  

End:

692616

Strand:

-

>Scaffold10040_LTR-Gypsy_89

TTAAGCTCTCCTTCTTCTCCATTTGACTTCAACATCTCCAATATCccttgaatgcacctgaaacagctaaaaaatgcaatatgcatgcaattctaatgcaaaacactctaagtatgcaaaactggaaacaaatgctaagaacatgctattaaacaaggctaaatgggtgataaatgcatgctaaaaccatgtaaaatacagacatatca

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_90

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1745

Start:

692617  

End:

694361

Strand:

-

>Scaffold10040_LTR-Gypsy_90

actcccccaaacttagtctttacttgccctcaagcAAACATATAAGAATAAGATGGAGAAGGGGTTTGAAAATGGGGATTCAGAACGAAAACTTGCAGATATAATACATGATCTCAatgtccaagtTGCTAGTTCTAGAATGCAAAGTATATGAATTCTACTTAAAAAACATTAGCCATACTCTTTAACCTATACATGCATTCAAATCTACCATTCCCTTTAACATTCAATTAAGtagaaaccatGAATCAAGCTATGCACATTCAATGAACTCATTTGGCTAACGGTAAGGTTAAGAGACAAAGATGGTCCCTTCCATATGGTTTGATCAATTCAGAATAGGGATCTCTCAAGGAAAGGAATGAGCTTTAGTACAATGCTAAAGGTAAGAACCAACCTATGCATACAAGAATAGACTCTCATCTacccaatcatacacaagtgttcttaacccccagttctaaacccagaaagttgtcctaattctacccttaacacttaggcaatttgtcttgaacttttcttggatcagactcattttTTTCTTTTTGTTCTTGTTCTAGGAGAGGTTCTTTATACTTCTAGCGGATTTGGGGTTTTTCTTATGGCTTTTCACTACCAGCTTAGGCTTTTTCTATATTTTTCAGACTTTAAGCTTTTTGCCTTTCTTTTCTCTTTCTTAGCACACCcccatatcctttactagattaacacatttttagatcattcccctcctaagaattcttaaCCTTTTTCTTTCATCTTTCTCCAAGTTTTCTTTCTTTCTTTTCACAGAACTAAACCCGATACCCAATGATCAAGATCCCACCTAGTCCTATCTGATTCAAAAATTACAaaccagaactacatgagattctatccttgtcggctcaaACCTAACACTTTCTACCAAGCTCATTCAGAAATAGGCCTCACACACTCAACAAAATAATATCATGGCTTGAAAGAAGGCTAGGCTAAGGGCATAGTAAAACTGTTCTAATGatgagaacagctacttggattagcaagagtggtaaacaggtgaaagaaaatccaagtatgtatatggtatccatgagttcaaatgtagttcatagacatgataattataagtcaagttcaggttcaaatagatagggaatggtatcaaatcacagcatgcttcaattgagacaataatctagttgtgcattcaaagtatggtatagtcttacttcaagttcattaacaatgcattagacaactagaaacgagggcattgaaattatcatattaaatcagcaagcttgcaaggtcataatcatcataatcccctATGCATATGCAACAGCCCTATATGAAAACAATCTAGACTCAATCCTAAAAAGTTAATGCAACTACATGAACACTCTGTTTTTgtaatctttttCGAAAATTTTTCAAATTTTTTTTTTTTTGGTTTTTCTATGCCTTAGATGCATGCAAACTCAAATATGCATAAAATAAGAACACAGAAAACATGTCAAACATATCTTAAATCCTCCCCCAAACTTAAATTACACAGTCCTTAGTGTATTAAAAATCTGAAGGATGGTTTAAGAAACAACAAAAAACACTAAAAAAAAATGCAAATGATATATACAAGAATGGATAGAACAggtacctcaaGGGTTGGAGAAGAAAGAGGAGATTGAATCCTCCATGCTTGCTCTGGTGTATGCAGCGTGGGAGCTTGACTCGACCTGGGGCTCGAGCTGCGTGGT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_91

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

265

Start:

694474  

End:

694738

Strand:

-

>Scaffold10040_LTR-Gypsy_91

TCCTGAAATCACATAAACAAGCCAAAAacaagaacttagcacacttattcgacggtttaaaaaagaaaaataaagcaatatatacaaggatagacatgggacttcctcctaagtgagcttgtttaaagtctctaagctTGACTTCCTTTTTCTTAGGTCTATGGTGGTTCATGGAGGGGAACTGAGGTATCCTCTGCAATGATCTGACCATGTATGAATGGCTTGACCCCTTGCTCAGTCATTGTGCTCTCGACTCCATCCTTTC

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_92

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

1383

Start:

694738  

End:

696120

Strand:

-

>Scaffold10040_LTR-Gypsy_92

CTTAGCCCAGCAGGAAGTGGTTTGAGGTCTACCTTAGGTGCTCTGAGTTCtgaccagtcgcctgatgcagaGAGGTCTGGCTCGACTTGGGGATCGAGCTGTGTGGTCGAGTCTGGCGCTGATTGCAGTCTGGCTCAACCTGGTTGGTCGAGCTGGGTGGTGGCGCCAGtgcgttctgcAGCAAAAACCTCTGTTTCGACCCCAATTAGATCTTCAAAGACCTCTGACCCTTCCAAAACcttatgtgagTTCAAGATCATCTCATAACCCAAAGTTTCATCGTGTAGGTACCCATCTTTCCCACTCTTTATCAAAGCAGTCTGAAGGTGATCTTCCACATTAAGTTCCTCCAGAAGTTCACCAACAAGTTGATCCATTTCCTCAATATAGAAGATCTGTCCTTCTATTGCTGGCtttctcattgtgtctttgatgtcgaatgtcattttgaaatcactcccaagagtaaGATCGATCTTTCCCTTTCGAACATCAATAACTGCCCCAGCTGTAGCTAAGCAAGGTCTTCCAAGAATCAGAGGATCTCTCGGTTCTTCATCCATCTCTAGCACTATGAAGTCTATAGGTATCTCAACTGTTCCAACCCGTAGAGGTagatcttgtaaCATGCCATGAGGAGTTCTAACAGATCTGTCTGTAAGCACCAAAGATATGTTGCAAGGTTTGTAATTGCTGAATCCTAACTTCTTAGCAACTGAGAGTAGCATGAGACTGATAGATGCTCCAAGATCACAGAGAGACTTTTTGAAAATCaatagacctagagagcATGGTAGAGTGAATGAACCAAGATCACTTAGCTTCTCCTTGATAACCCTCGTCTGGATAATAGCACTGCACTCTTCTGATAAAACCACCATACCCTGAATCTCCTTGGCTTTCTCATTTACTGCATCCTTCAaaaatttctgatatgcaggaaacattgagaaggtatcaatgagaggtatcctaatctctgcttccctcATGTGCTTGTCAAAAATTGCTCTATACTTCTCCATTAAGTCCTTTTTGAACCTTCCTGGGAAAGGTAGTTTGGGTTTGTAAGGAGGGGGAACTGAGGGTTGTTTCTTTTCCTCAGAAATAACTAGTTTTTTAGCAGGTAGTGCACTGACTCGACCTGACACTCGAGCTAGTTGGTCGAGTATATATATTTTTTTTTTCAAAATTAGCTGATTTTTCAGCAGGTGGTGTGTTGGCTCGAACTGGGGCTCGAGCTAGCTGGTCGAGCCTGTCGAGCGAGTAGGGCTTCTCAGCTTGACCTTGattcaaatcctCCCCATCTATACCCTCACTGTCCACAGTGACTGGAACTGATCCTTCCCTTTCAGGTAACTTTCTTCCACTCCTCAAAGCGAT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_93

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

2632

Start:

696443  

End:

699074

Strand:

-

>Scaffold10040_LTR-Gypsy_93

TGTGGTCCATCTGGGTTTTGATTTCACCAAATTTCTTAGCTACGTCAAATGCACCAGCTGCCTGACCTTGTAGAatttgttgcaGCATGTTCGTCATCTGTTGATTTTGAGTATGAGAAGGCTGAGCTTGGTGAGGTGTAAAACCAGGTGGTGGACCCATGACTTCCTATTGCGGATAGCTGTTAGGGTAGTGCAGCTGAGGAACAAAACCCTGATTCTGGTTGTAAGCGGTAAAAGGCTTGGACTGAGGCGGTTGTTGCTGAGGCGGGTAGACCTGATCctgggggttagCAACATTGGTGCTTCTATAAGAGAGATTCGGGTTGTTCTTGTAGTTGAAGAAACCTTTGTTGTAGCCACCCTGATTCTAAACATAAATGACCTCTTCCATACCATCATCCTCCCTATCCTGAACCTGAAAGACCGTATCTTCAGTGGCAAAGTGGACATGCTTCTGCTGGTGTAGGAGTTGATCTAACTTGGCATTCATAACTTTCATCTCCTTTCTATGCCTCTCTTCTGAATCAACACTACCCCTTACACTTCTATCATACTCCGCAGTGTAGTTTCCATCGGATTGAGCAAGGTTCTCCACAAGCTCCCATCTTGCATCAACATCTTTGTTGAGGAAgttaccattgCTGGCTGTATCAAGAAGCATTCAGACCTTTGGGAGAACTCCTCTGTAAAGTGTGCTAAAGAGGGACTTATTGCTGAAGCCATGGTGAGGAcattgagtggTGTAGCCTTTGAATCGTTCCCAACATTCACAGAAGCTCTTCCCATCTTTCTGAGAAAATCCGGATATCTCATTCCGGAGGCGAGCCATTCGAGCATTGGAGAAGAACTTGGCAAGGAAAGCTTTCTTGGAGTCATCCCACGAAGTGATAGAGCCATGGGGTAGATTCTTctcccagagaTGGGCTTTGTCACCAAGAGAGAAAGGAAATAGTCTCAGCTTGAAACCATCTTCACTGACGCCATTGATCTTGGTAAGGCTGCAGATCCTATCAAACTCATCCAAATGATCGAGAGGGTCTTCCATAGGCAGCCCATGGAATTTGTTGCTTTGCACCATAGCtattaagccactcttgatctcgaagttgttgttctggactgtaggaggtACAATCCCTTGTCTGTTGGTGTGAGTGTTGGGAGCATCTCCCGCACCAATAAGAAGCTGCTTTCTCGGGTAAGGCATATGTTCAGGCTGGGGTGGTGGATTATCATCAGCCATTTCTAGTGGATTCTGGTGATCTACGCTGAGATGTTCTCGCTGCTCTCGCAATTGTTGTGGTAACTTATGAATATTATcgaggtagcggATTAGGTTCTGGTTTCCTTTTGATCGCGTTTGCATGCAGGTGGAGGATGATTCGATGGGCTGACTCGAGCTAGGGTGGTCGAGCTGGCGTAGTCGAGTCTAAAATGTACCTGAAATGCAAAGACAAAGAAAGAAAAACCAAgtgagtaacagagtagacagaaaagaacttgatctaaaacgatttgaaatcctaaatgtaacaaacagcacccaaatggcaacggcgccaaattgaattacgtcaatttccttattgaactatcatgtcattgtagtacaataaggtatcaatccaaatgggtgcgatattaaccaagaaggatgcaatcaaacattttaAGTCAAGCCAAGCAAGCTATAAGGTGAGAAACTATCAACCTAAACAGAGAACTAGAAATAGAGACTCCTAGCAAGAAAACAGAGACAATAGGCAACTAGCAAATTAGCAAAGCAGAGACTCTTAGCAAAACAGAATGAAAACCGAGCAATAGCAGAGCAACAGAAATCAATCAAGCAAGAGAAGCTCctaaggatggGGTAATTGACTTGGTGTATCCTCTTAATCTACCTAGGTGGTTTAGCAAAACTCAAGCAAAGCTATTACCTAGATAACAAACTCATAAGCAGCTAAATCCACTCCCGTGACCAATAACCTCAAGCTAATCCAGTTCCAGACCTAATCCCTTAGTGAAATCTAGACTAACAGgtattaagattcagtttgttaaagccaataaacaccctagacatctaatcccttaggctaggaatgtaaatctctggaattagttttgtcagacatttcatcaaacaccttctaggtgtggaaatacctaagttctaattccaattgatcagaGAGAAATTAGCATTAAGAACACTAATCTAGAAGGGAAATCAAACAATCTACACTTAAACAACCTAGGAGACTAAGATTCCACACCTAATCTATCACatccttaagaaCCCTAATGACTACTCAGAAACCATGAAGAACATCAAGAACACAAATCCAGAAAACGAAATTACTTACATAACCAGAAAGATAAGGTAGAAAACTGATGGAATAGAAGAAATCAAACTGAAATAATAAGTCGAATCAAAGTTACAAGATCTAGAAAGCAAGAACAGAAAGAGAGAGCTAAAAAAACGAGTTCTTAAAGCATAAAAAACTTGTTCTCAGTCTTAAACCCTCAAGGGGTATTTATACTAAAACATAAAAAACTCTAAAACAAAAAAAGATAAAATAGCTAAATTCGGGGTTGCACTCGACATGGGGTCGAGTGCTGAGGTCGAGTT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_94

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

269

Start:

699328  

End:

699596

Strand:

-

>Scaffold10040_LTR-Gypsy_94

CTCGAGCTGCTGACTCGAGCTGCTTGCTAGAGTCAGTCTCCATTCGAGTTTCTGGTcgagttaagctctccttcttctccatttgacttcaacatctccaatatcccttgaatgcacctgaaacatctcaaaaatgcaatatGCATGCAATCCTAATGCAAAACACTCTAAGTATGCAAAACTGGAAACAAAGGCTAAGAACATGTTATTAAACAAGGCTAAATAGGTGACAAATGCATGCTAAAACCATGTAAAATACAAATATATCA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_95

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

137

Start:

699983  

End:

700119

Strand:

+

>Scaffold10040_LTR-Gypsy_95

TTTTCTTCCATTATGTACTCTTTGTTGCTGATGTATCTTTCCACATGTTTATTTACACACGGAGACGGTGTGAAGTAAGTATGGGGGAGGATACTAGTTTCGAACTAATAGTTTGTTTGTTTTGTTTTGTTTCCTTG

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_96

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

104

Start:

700948  

End:

701051

Strand:

+

>Scaffold10040_LTR-Gypsy_96

CCCCAACTTAGGATTTCTTTAGTAGCCTAGCTTTTGTTTGCTTGAGGATAAgcaaaagataaGTCTGGGGGAGTTGATATATTATGGTTTTATTGGTTTTTAAC

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_97

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

507

Start:

704734  

End:

705240

Strand:

+

>Scaffold10040_LTR-Gypsy_97

AAGTTAATGGCCCCTACGTTTGCCAGAAAAGTTGACCCGGAACCCTACCTTGATTGGGAACAAAGGATGGACCATATCTTTGAGATCTACGCCTATGAGGAGCCTAGAAAGGTCTCCTATGCTGCTGCACAACTCACTGATCATGCCCTTACATGGTGGGGTAGAGACGCCACTAAGAGAAGAAGAAACGGAGAAGGATCGGTCCTGTCTTGGGAAATCATGAAGTTCATGATGAAAGGAAGATATGTGCCTCTCCTTTACCAAAGAGAGTTGCAAAAGAAGTTCAGAAAGCTTACTCAAGGGAGTAAGAGTGTTGAAGAATACTATGAGGAATTTGAGCATCTAAGGAACCGTCTTAACCTAGAAGACACCGAGGAGACACTCATGGGACAATTTCTCGTTGGGCTTCAAGATCGAATTGCTAACAAAGTGGAGATGCATGGTTACAACGACCTAATGAGCTCTTGTACTTAGCTACTCAAGTTGAAGGTCATCTCAAGAAGAAGA

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_98

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

119

Start:

705419  

End:

705537

Strand:

+

>Scaffold10040_LTR-Gypsy_98

AAAGACAAGGGATATCATGTGCTTTAAATGTAGAGGCCGAGGACACTATGCTAGAGAATGTCCGAATCCGAGGGCTATGATCATTACTCCGTCGAGTGATTATGAATCGCAAGATGAGG

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_99

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

215

Start:

705560  

End:

705774

Strand:

-

>Scaffold10040_LTR-Gypsy_99

TGATATGCTCAAATTAATACCCTAAAAGTACTAAagcagttgctgCAGTATATCAGGGGTCGAACACAAGAACTCAAGAAGATTCACACAATAGAATAACTCAGTGAGGATTAAGCTAAGCAAATCACAGTTATACAGTAAAATAGGTGATCGAAATAATGATTGTTTTAATTCAATTCAGGGAAGGATCAGGCTCAGGGAAATTCTCAGGAAAT

Boechera stricta (v1.2)

ID:

Scaffold10040_LTR-Gypsy_100

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

387

Start:

706302  

End:

706688

Strand:

-

>Scaffold10040_LTR-Gypsy_100

AATGACTAAAAACTACTTAAATAGGTCTAAAAACACGAgctgggcttctttgtaaataagggaaagtattgggcttcttatgggcttccttgaaaatctcttctgcgcgttgattacgtcggtatcgatcgataccatgatggtgtcgatcgatactcggaatggtgtcgatcgatactcggaatggtgtcgatcgatactcaggcttcaaaacgggtactttcttcggtttgctccaaaaaggctccaaatgcctccaaaatctccaatttcgtcccaaacgtgctaaaacctgaaaagactctaaaatgatagaaaaagcactagaaagactcgatAAAGCGACTTATATCATGGCTAAAAACGGGTAAAATCCATGATATATCA