Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_61Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
158Start:
596772End:
596929Strand:
+>Scaffold10040_LTR-Gypsy_61
agacgggaggaccgtctcactaagcattatcaatgcttacgcgcctcttttggtgcaggtaaagagaagtcttaagtcttggagcgcgtggaaccaaggccgaagggagggaaaaggatgatctagacgggctctcgtatcttgtgtttgggttgttt
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_62Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
929Start:
597971End:
598899Strand:
+>Scaffold10040_LTR-Gypsy_62
tgatgggtatgttggctcagattttggagaggttaccaggaccggtaccagctccagcccctgagatgccaccaagaggtgaagagccaccaagagttatggctcatgaggcagttgcagggcaaatgatcccatcttacctttccgtgatggatcatatgcagaggcttggcaCAAAGTTCTTTCTTGGGGGTGCCAAACCTGTTGAAGCTGATGAGTGGAGGACAAGACTGGAGAGAAACTTCCACTCTATAAGGTGCCCTGAGGAGTATAAGGTAGATattgcggtgcattacctggagggagatgcgcatatgtggtggagaaacgTGTTGGCTAGAAGAGCCAATGGTGTGAATACTTGGGAGGAATTCTGTGAGAAGTTCAACCTCAAATACTTCCCGCAAGAAGCTATGGATCGTTTGGAGAAGTAGTTTTTAGAATTGTCTGAAGGAACGAGGTCGGTTCGAGAgtatgaagtgGAGTTTAACCGACTTTGAAGGTATGCGGGGAGGGGTCTTGAGGATGAATAGGCCCAAGTAAGAAGGTTTCTAAGGGGGATGCGTTTGGAGTTGAGGAATAGATGCAttgtgagatcaTATGCATCGGTGGCCGAGTTAGTGGAGAAGGCGGCCATGATTGAAGAAGGTTTAATAGAGGAGAATAAAGCAGCTAAGTCTCCGACTCAAGGGAAGAAGTCCTTTACTTCCGATTCTGGGAGAGGTGGCAAGTTCATGGGAGGCCAGAAGAGGAAGTGGgagggctcttcTCAGAGTGCTTCTAGCACTCAATCGGGATGCTTCAAGTGTGGAGACAAGAGTCATAAGGCTGTTAACTGTCCTAATAAGGATAGCAGGATTTGCTTCCATTGCAAGGAAGTGGGACATATCAAGACTTCCTGTCCCAAACTTCAACAAGGTAGCGGAAGT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_63Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
3438Start:
599016End:
602453Strand:
+>Scaffold10040_LTR-Gypsy_63
TAAATTATTTCGATATGGTTATGTATGTTGTCATTTGTGTGTGGGTATTGGGGTTGTTATTGGTGTGTGGCCTCAATGCATAGACTATGTGTAGGGaccctgaacgTGGGAGGGGTTATATCTCACGTGTTGTTTGATTATGGAGCATCTCATTGCTTTGTCACTCCGGAATTAGTGAAAGAAGGAAGGCTCCGAGAAGAGCCTAGTGATTGTTTGAGAAGAGTGAAAGTGGATGGGGGCCAGACTTTTGAGACACATAGTCTAGTAAAAGATGTCGAGGTCCATATTGCGGAGAAGTGAAGCCAGCCAATCTAATCGTGTGGCCGGTGGAATTATATGATGTGATATTGGGAatggattggctTGGGAAGTATAAGGCTCACCTAGATTGTCATCGGGGTCGAGTTATATTCGGAAATGACCATGGGCGAGTGGTGTATCAAGGCGTGAGACCTACGCAGGGAAGCTTGGTGATTTCGGTTATTCAAGCCGAGAAGATGATAAACAACGGATGTGAAGCATATCTCGCGACTATCtcgatacccgaGGAGGTTGGAGATTCAATGCTTCAAAACATTCCTGTGGTGAGAGAATTTGAAGACGTGTTTCAACCGTTGGAAGGATTACCGCCACTGAGATCGGATCTTTTCACGATTGATTtggaaccggggACGGCTCCTATTTCTAAAGCTCCATACCGTGTGGCCCGGCGGAGATGGCAGAGCTTAAGAAGCAATTGGAGGagctattggaTAAGGGTTTCATAAGACCGAGCTGCTCACCATGGGGAGCGCCGGTTATGCATTGATTATCAGGGTTTGAATCGGGTGACGATAAAGAATAAGTACCCTCTTCCCaggattgatgAGTTGTTGGATCAGTTAAGAGGTGCTACTTAATTCTCGAAGATTGACTTGGCTTCTGGATACCATCAGATTCCTATAAAGGAGTCAGATATTCAGAAGACTACGTTCAGAACGAGGTATGGGCATTATGAGTTtgtagtgatgcCTTTTGGGTTGACGAATGCACCAGCGACTTTCATGAGATTGATGAATGACGTGTTCCGGGAGTATTTGGATGAGTTTGTGATCATCTTTATTGATGACAtattggtgtatTCGAAGAATTCTGACGAGCATGGTGATCACCTGAGAAAAGTATTGGAGAAATTAAGGGAGCAAAAGCTTTTTTCGAGGCTAAGTAACTGTAGCTTTAGGCAAAGAGAGATTGGAGTTTTGGGTCACGCAGTTTCGGAGAGCGGAGTATCTGTCGACCCAGAAAAGATTAaggccatcagAGAATGGCCGAGACCTGAGAATGCTACAGAGATAAGAAGCTTTCTCAGTCTAGCCGGTTATTATAGGAGATTCGTCAAAGgttttgcgagtATTGCTCAGCCTATGACAAAGTTGAAAGGGAAGGATGTTCCCTTTGTTTGGTCTCAGAAGTGTGATGAGAGCTTCTTGAGACTTAAGGAGATGTTGACTACTGCTCCAGTGTTGGCTTTACCCGATCCGAAGGAGCCGTACGTGGTTTATACGGATGCCTCGAAGTTAGGATTGGGTTGTGTTTTGatgcagcatgGGAAGGTTATTGCTTATGCTTCAAGACAATTGAGGAAGCATGAAGCTAATTACCCTACTCATGACTTAGAAATGGCTGCAGTAGTGTTTGCTCTAATGATTTGGAGATCATATCTGTATGGGGGTAAGGTGCAAGTGTTCACAGACCATAAGAGTCTCAAGTATATATTCACTCAGCCTGAGTTGAACTTGAGACAAAGGAGGTGGATGGAGCTTGTGGCGGACTATGACCTTGAGATAGTTTATCATCCAGGGAAAGCTAATCTCGTTGCGGATGCGTTAAGCAGGAAACGGGTAGCTGCAAGTACCGAGAGAGATGCTGAGGAGTTAATGAGTATGATTAGTACCTTGCAGCTATGCGTTATTTCTAATGAGTCAGAACCGTTGGGTTTAAAAGCGGTTAATCAGGCGGATATCTTGAGCAGAGTACGTACGGCTCAAGATAAGGATGAGGCTTTGATTAAAGCTTATAAAGATGAGAAAACCGAGTATGAGATTTCGAATAATGGAACCATCTTGGTTCATGGTCGAGTatgtgtgcctaATGATGAGGAGTTGAGGAGAGATATTCTTCGAGAGGCACACCAGAGTCGTTTCTCTATTCATCCCGGGGCGACTAAGATGTACCGAGATTTGAAACGGTATTAtcattgggttGGGATGAAGAGAGATGTAGCCAAATGGGTGGCTAGCTGCGAAACTTGTCAGTTGGTGAAAGCTGAGCATCAAGTCTCGAGCGGTTTATTACAGAGTTTACCCATTCCTGAGTGGAAGTGGGACATGGTGACAATGGATTTTGTGGTTGGGTTACCGAATTCTCGGGGCAGAGATGCGACTTGGGTTATAGTTGATCGTTTGGCAAAGTCTGCTCACTTCCTCGCGATAAGGAAGACAGATGGAGCTCGGGTTTTggcgagaaggTACATCAATGAGATTGTGAGGTTACATGGGGTACCTGCGAGCATTGTATCAGACCGTGATAGTAAGTTCACATCGGTTTTCTAGCGAGAATTCCAGAAGGAAATGGGTACTAAGGTACACATGAGTACAGCATATCATCCTCAGACGGACGGacagtcagagagaaccaTTCAGACTCTTGAGGATTTATTGAGGATGTGTGTGCTGGATTGGGGTGGCATTGGGCCGACTACCTGAGCTTGGTGGAGTTTACGTATAATAACAGCTACCAAGCTAGTATCGGAATGGTAGGCTATGCAGAACGCCATTATGCTGGACTCAAGTGGGGGAGCGAAGCATGTTTGGCGAGGGCATTGTACAGGAGACTACGgaaaagatccgAGTCTTGAAGTTGAATATGAAGGAAGCTCAAGACCGTCAGAAAAGTTATGCGGATAACCGCAGGAAAGAGTTGGAATTCGCCGAAGGAGATATAGTTTATCTCAAGATGGTGATGCTTAAGGGTTCCAACAGGTCTTTTTCCGAAAGTAAGTTAAGTCCGAGGTATATGGGACCGTTCCGAGTGGTGGAACGAGTTGGTCCTGTTGCCTATAGGCTGGAGTTGCCAGCGTCTATGCAAGCATTTCACGATGTTTTCCACATTTCAAAGCTGAAGAAATGCTTGCATAGGGACGATCAGGTGTTATAGGACATTCCACCTGAGTTATCACCGAGCTTGAGGGTCGAGGCAAGGCCCGTGAAGATTCTTGATCGTAGGATCAGGGTTGACGGGAGGAAGAGAACTCCcgagattaaggTCTTGTGGGATTGTGACGGGATTGAAGAGAAGACTTAGGAACCGGAAAGAAGAATAAAGGCCAAATTCTCCAAGTGGTTTGAGAAACAAGCCGAGACTTAGATTCGAGGACGAATCTAATTAAGGGGGGAGAGA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_64Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
174Start:
604347End:
604520Strand:
+>Scaffold10040_LTR-Gypsy_64
TATGTTCATGGCCGTGAGATGGGACGACCGTCTCACTAAGCATTATCAATGCTTACGCGCCTCTTTTGGTGCAGGtaaagagaagtcttaagtcttggaacgcgtggaaccaaggccgaagggagggaaaaggatgatctagacgggctctcgtatcttgtgtttgggttgttt
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_65Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
271Start:
606038End:
606308Strand:
+>Scaffold10040_LTR-Gypsy_65
gcacagcagggggtgcttacttttatgatccgcggagtgagataccgtcttcccttccaggatctttgcagcatctacggtttccgtagaaacttctcccgctgcgagctgcccaccaagttcctagacgtccaaaacttcTGGCGGCATTTCGGTCATGGGCAATATCACAGCAAGACGACCACACAGATAGATATCCGCCATCCGGTCCTGCGATGCCAGGCTCGGATCCTGAGCAACACGCTGATGTGCAAGATGGAGCCCAACAAGA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_66Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
194Start:
610472End:
610665Strand:
+>Scaffold10040_LTR-Gypsy_66
TGGAGATCGAGATTGGAAAGAAATTTCCACTCTGTAAATGCTCGGAGGAGTATGAGTTGATCTCTTGGTGCATCACTTAGAGGGAGATGCAcatatgtggtggagtagtgtattggctaggaaagccaacggtgtaggcatctggggagttttagaggtgaggaataagtttgatgctagagtgcttccttcag
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_67Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
150Start:
612829End:
612978Strand:
+>Scaffold10040_LTR-Gypsy_67
GTGGTCtcagaagcgtgacgggagcttcttgagacttgaaagaatgttgactggctccggtgttggcttaaccggactttaaggagccatatgtgattgatacaggtgcctcgaggctaagtttgggttgtgctctaacgcagcatggga
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_68Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
886Start:
613003End:
613888Strand:
+>Scaffold10040_LTR-Gypsy_68
agagatgctacgggcttggtgagtacgattagtacttgttgctacgtgttattttcgataagttagaaccgttgaggtttaaagcggttacccaggctgatattttgagaagagcgcgatgtgctcaaaggaaaagatgagaattaattagggcttctaaggacaagaagtcCGAGTATTGGGTTCTGAATAATGAAACCACCCTTGGGAATGGTCGGGTTGTGCGCCGAATGATGAGGAATCGAGGAGAGATATTGTTTAGGAGACACATCAGGGTCGATTCTCTACTCATCCCGGGGCGACAAAGATGTACCGAgacatgaagtggtactatcattgggttgggacgaataggaatgcgaccaaatgggtggctagtcttgagactcactaattagtgacaattgagcatcaaatcccgagcgggttattacagagtttacccattcctgagtggagttggGATAGGAGTACGATGGATTTCGTAGTTGACTTACCGCTTTCTCGGGACAACGATGCTATCAGGGTTATTATGGACCGTTTAACCGAGTCCGTTCACGTTCTCGCCCTAAGGAAGTCAGGTGGAACTCGAGTTTTGGCGAGGAAGTACATCAGTGGGATGGTGTGGTCACATGGTTCACCTATGAGTATAGCGTGTTATCCTTTTATGACGGGTAATCAGAGAAAACCATTTAGACTCTCGAAAATCTATGAGGGATATGTGTGTGTTAGATTGGGGTGGCCAATGGGCCGATTACCTGAGCttggtagagtTTATGTATAATAACAGTTACCAAGTGAGTATAGGGGAGGGCACCATACGGGGCTTTGTATAATAGGCCTTGCATGATGCCATTATGCCGAACTCAAGTGGGGGAGCAAAGCA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_69Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
108Start:
625485End:
625592Strand:
->Scaffold10040_LTR-Gypsy_69
TAAAAACGTGTAAAATACGATGTTATCAACTCCCCCACACTTATCTTTTGCTCGTCCTCGAGCAAACAAAAGTCAAGCATGGTGAAGTTATTTTATTAAAAGCAGTAA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_70Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
353Start:
626822End:
627174Strand:
->Scaffold10040_LTR-Gypsy_70
TTTGGCCAATCGATGACCGCACCAACTGTTGCTAGGAACGGTCTACCAAGGATGAGTTCAGTGTGATTATCTCCTCTTATTTTGACTACATGGAAGTCAGTAGGAACGCAACAGTTCACAATCCATATGATCACATTTTCAGCAACTCCGTATGAACGCATCGCATCGGCATTGGCGAGCCTGATCCGAATTGTTGACCTTTTAAGCTTTGTGGATTCCCAACATCTTTGCTCATTCCATGGACATGACGTTTATGCTTGCTCCTGAATCACATAAAGCATCATTGaaagtacgaccAAGTATAGAGCATGTTACCTTGTATTGTCCAGAGTCATCTCTTTTGAAGACTGTTG
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_71Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
973Start:
628451End:
629423Strand:
->Scaffold10040_LTR-Gypsy_71
tgaaGGGGTTGGTGCCCTCATGGGTGGGTACGTCTGATCATGTGGATTCTCCACATTGTTGCTTCGGTATGAGAGATTAGGGTGGTTCGGGTAGTTAGAGTTGAAACCACCTTGTCGAAGTTACCGACAAAATTCACCTCACACTCGTTCTCTTCTCTTgcctcctcgtcAGCTTGTGCCCTTGCAGCATCCAACTCGTCTACAAAGTGAACATGTCTCCTTATCACTTGTAGTACCTTGTCCAACTTGTCGTTTAGTGCTCTCATGTCAATCTTCATCTTATCACCTCCATCATCGGTTATACTATGATCTCGACGATCATCGTCTCCTCCGCAGTTAGTGTCACTTTGCGCCATGTTCTCCACCAATGTCATTCAATGCTCAGCATCTTGCCCTAAgaagttaccgtTGCATGCGGTATCAAGTAGCTCGCGATACTTCATCAAGAGTCCTCTGTAAAAAGTGCTCAATAGCGACTCTTCACTAAATCCATGGTGTGAGCATTGAGATAAGTATCCCTTGAAGCACTCCCATATCTCTCCAAAACTTTCTGAACCTTTTTACACATAGCTCGATATCTCATTGCGGAGTCGAGCAGTCCGAAAACTTGAGAAGTACTTCACAAGGAACACCTTCTTGCATTGCCCCCATGTTAggatcgacccaGGTGGTAGACCTTTCTCCCATTGTTGTGCTTTGTCCCAAAGAGAATGGGAATAGACGCACCTTCAGAGCGTCCTCTGAAACTCTGTTAATCTTCACTGTACCACACAACTTATCGAATTGATCCATATGATCAATTGGATTCTCCATAGGCAACCCATGAAATTTGTTGCCTTGCAACATAGTAATCAAGTCTGACTTGATTTCAAAGTTGTTGTTCGCAACTGGTAGGGCGAGAATCCCAGATCTTTAAGCCACAGAAATAGGCTCATCAATTGTACCAATAGTCGGGGCGACTCTTGGTTGGCGT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_72Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
153Start:
633374End:
633526Strand:
+>Scaffold10040_LTR-Gypsy_72
TGATATGTCTATATTTTACATGGTTTTAGCATGCATTTATCACCTGTTTAGCCTTGATTATTAGCATATTCTtagcatttgtCTCTAGTTTTGCATACTTAGAGTGTTTGCATTAGGTTTTCATGCATTTTGCATTTTGGAGCCGTTTTAGGT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_73Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1005Start:
633994End:
634998Strand:
+>Scaffold10040_LTR-Gypsy_73
GTTTAATTTCTTCTATTCCATCATTTCTCTTCCTTATCTCTTTACTTATGCAAGTAATTTCGTTTTCTGGGTTTgtgattatgctgttcttcatgtgttctgagtagtcattagggttcttgaggatgggttagattaggtgtggaatcttagtctcctaggtggtttaagagtagattgcttgatttcccttctagattagtgttcttaatgctaataactctctgatcaattgaaattagaacATAGGTTTTTCCACACCCAGAAGGTGTTTGATGAAATGCCTGACTGAATTTTAGCCTAAGGGATTAGTTGTCTAGGGTGTTTATTGACTTTAACAAACTGAATCTCAATGCCTGTTATTCTAGATTTCGCTAAGGGAttaggtctggaactagattagcttgaggttatcTGTCACGGAAGTGGATTTAGCTGCTTATGAGTTTGTTGTCTAGGGAATAGTTTGTTTAAGTTTATTAAACCATCTAGGTAGATTAAGAGGATACACTGAGTCTATAACCCCCATCCTTAAGAGCTTATTTTCCTTGATTGATTTCTGTTTCATTATCTTGCTAGTTTTTTTCAGTAGTTATCATTCTGCTATTGCTCTGTTTTCATTTTGCTAGTTACTACTAGTCTCTGTTTTTAGTATCTGTTTTTAGTCTCTGTTAGGTTGGAAGCTTCACATCTCATTGCTTGCTTGGCTTGACTTAGACAGTTTGATTGCATCCTTCTTGGTTAATATCGCACCCATTTGGATTGACACctttctgtattacaatgacatgaatatgcattaaggcatttgacagatagcataaacataaaaattTGCTATATCAAATTGGCGCCGTTGCCATTTGGGTGTTGTTTGTTACAATTTGGATTTCAAATCGTTTTAGATCAAGTTCTTATTCGATCTACTCTGTTACTGACTTAGTTTTTCCTTTCTGTCTCTTTGTATTTCAGGTACGACTTGACTCGATCTCACTAGCTCGACCA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_74Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1655Start:
635254End:
636908Strand:
+>Scaffold10040_LTR-Gypsy_74
ATTGGTGCGGGAGATGCtcccaacactcACACCAACAGGCAAGGGATTGTACATCCTACAGTCCAGAACAATAACTTTGAGATCAAGAGTGGCTACATAGCTATGGTGCAGAGCAACAAATTCCATGGGCTGCCTATGGAAGACCCTCCTGATCATTTAGATGAGTTTGATAGGCTCTGCAGTCTTACCAAGATCAATGGAGTCAGTGAagatggtttcaagCTGCGACTCTTTCCATTCTCTCTTGGTGACAAAGCCCATCTCTGGGAGAATCAACCCCATGGCTCTATCACTTCATGGGATGATTGCAAGAGAGCTTTCCTTGCcaagttcttctccaatgctcgaacagctcgcctccgaaatgagatctccagattttctcagaaagatggggagagtttctgtgaatgctgggaacgattcaaaggctacaccactcaatgtcctcaccatggtttcagcaatgagtccctactcAGCACACTTTACAGAGGAGTTCTCCCTAAGGTCCGAATGCTTCTTGATACGGCCAGCAATGTTAACTTCCTCAACAAAGATGTTGGTGACGGCTGGGAGCTTATGGAGAACCTTGCCCAATCTGATGGTAACTACACTTCTGAGTATGATAGAAGCGTGCGGAGCAGTGTTGATTTGGATGAGAAGACTAGGAAGGAAATTAAGGCTCTGAATGCCAAGATGGATCAAATACTCCAGCAGAGGAAGCAAGTtcactttgctagtgaggatacagtttttcaggttcAAGATGGGGAGGAAGATGATATCGAAGAGGTCAGCTATGTCCAGAATCAGAGTGGCTACAACAAAGGTTTCATCAACTACAAGAACATCCCGAATCTCTCTTTTAGAAGCACCAATGTTGCCAACCCTCGGGATCAAATTTACCCGCCTCAGCAACCACCGCCCCAGTCCAAGCCTTTTGCTGCTTACAACCAGAATCAGAGTTTTGTCCCTAAGTAGCATTACTAGACCAGCTATCCGCAACAGGGAGTCATGGGTGCCCCACCTAGTTTCACATCTCACCAAGCTCAGCCTTCTACCGCTCCAGATCATCAGACGATAAACCTGCTCCAACAGATTCTTCAGGGTCAAGCAGCTAGTGCAATGGAAGCTGCTAAGAAACTTGGTGAAATCAATACGCAGATAGATTACAACTATAATGACCTCAATAACAAGTTTGAGTCATTGAACTCAAAGATCAAGTACATGGAGGGCAGGACTGCATCTACTTCTAGCACATCACAGCTCCCAGGAAAAGCTGTCCAAAACCCAAAAGACTATGCTCACATCAATGCCATCACTTTACGAAGTGGAAAGGAGTTACCAGAGAGGGAAGGTTCAGTTAAAGTCACTGAGGACAATGAGGTTGAAGATGGGGAGGATTTGAGCTGCAAAGAATACAAAAAAACACGTCTGGAGGCTGACTCTAGCACCAAACTCGACCAAACTGGTCGAGCCAGCCCTCCAGCTGCGCCAAAACCAGTGgttttagagaaaaagaaagcaccctttgtccctcctccttacaaacctaaactgcctttcccaaaacgattcaaaaaggaaataATGGAGAAGTATAGAGCGCTTTTTGACAAGCACATGAGGGAAGCAGAGATCAGGATACCTCT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_75Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
720Start:
651789End:
652508Strand:
+>Scaffold10040_LTR-Gypsy_75
AGTACGGGGTTAATCATCGTGTTGCTACACCATATCAACCTTAGACAAGTGGACAAGTTGAGGTTTCAAACAGGCAGATCAAGGAGATTCTTgagaagactgcgggtacttcgcggaaggactggtctactaaactgaatgatgcgctctgggcatacagaactgctttcaaaacaccgctggggactacgccatttcacctgctgtatggaaaagcatgtcatcttcctgttgaacttgagcataaaggaatctgggcgacaaggctactcaactacgacatcaaacctgctgctgagagaaggttgattcagttgaatgagcttgatgagatcagatatcacgcctatgagaattcgaagttgtacaaagaacgaaccaaggtccatcatgataagaagATCCTTACACGACACTTCGAGCCAAACGACCAGGTCCTTCTTTATAACTCTCGTTTACACTTATTTCCTGGAAAACTTCGCTCTCGTTGGTCAGGTCCTTTCACCGTCAAGGAAGTGCGACCACATGGTGCAATAGTGCTGCTTAATTCGTCGGGAGACGAATTCACTGTGAATGGGCAAAGGGTCAAACATTATTGGGCGAAagccgaaattccagcaggacagatcgtgcctctggctaatccacccgtcgcctaaccgtcgttgaagtcaggctcgtgacatTAAACAAGCGCTCGGTGGGAGGCAACCCACTGGT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_76Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
2503Start:
656878End:
659380Strand:
+>Scaffold10040_LTR-Gypsy_76
ATTTCCCATTGCCATTCATTGATCAGATGTTAGAAAGACTTGCAAATCACTCTTATTACTGCTTCTTAGATGGGTATAGTGGTTTCTTTCAAATTCCAATTCAtcctaatgatCAGGAAAAAACTACTTTTACTTGCCCATATGGAACATTTGCTTATTGGAGAATGTCTTTTGCTACTTTTCAGAGATGCATGACCTCTATATTCTCAGATTTAATTGAGGAGACTGTggaagtattcatggatgatttttccgtgtatggctcctctttctcctcctgcttgttgaatcttTGCAGGGTGCTTACTAGGTGTGAAGAGACAAATCTAGTTCTCAACTGGGAAAAATGCCATTTCATGGTTACAGAAGGAATTGTCTTGGGGCACAGAATTTCCGAGAAAGGGATAGAGGTAGATAAAGCCAAGGTTGATGTGATGATGCAGCTGCAACCGCCTATGACTGTCAGAGATATCAGGAGTTTCCTTGGGCATGCTGGGTTTTACAGAAggttcatcaaggatttctcaaagatagccagaccactcactaggctattatgcaaggaacaagaattcatctttgattctgagtgtttgaaagctttccagctgattaaggaagctttggtctcagctccaatagtccaagcaccaaactgGGATTATCCGTTCGAAATCATGTGTGATGCTTCGGATTATGCTGTGGGAGTTGTTTTGTGTCAAAAGATTGACAAGAAGCTGCATGTGATCTACTATGCAAGCAGAACACTTGATGAAGCTCAAGGGAGATATGCAACAACGGAgaaggaattactggctgttgtctttgcttttgagaagttcagaagctacctagtgggttccaaggtgatagtctacacagatcatgcagcactcagacatatctatgcaaagaaggagactaagcCAAGACTGCTCAGATGGATACTTTTGCTACAAGAGTTTGACATGGAGATTATTGACAAGAAGGGTATAGAGAATGGTGTAGCGGACCACTTATCAAGGATGAGGATTGATGATGCAGCACCAATTGATGATTCCATgcctgatgaacaattcatggaagttgtcatgatagtagaggaaaagagaccctggtatgcagattttgccaattaccttgtaagCGGCGAAATTCCTGAAGGTCTTGATGCTTACAGGAAAAAGAAGTTTCTGAAGGATGTGAACCACTACTTCTGGGATGAGCCCTACTTATACAAGAGAGTTTCAGATGGTCTATTTAGAAGGTGTATAGCTGAAGAAGAGGTAAGGGGAGttctagagcattgcCACGGTTCAGTATATGGAGGTCACTTCGCTACATTCAAGACTGCGCAGAAGATGCTGCAAGCAGGTTTATGATGGCCATCGATGTCCAAGGATGCTCAAGCTTTCATCACCAAgtgtgatccttGTCAGAGAATGGGTAACATCAGTAGAAAGAATGAGATGCCTCAGAATCCAATTCTGGAAGTTGAATTATTTGATGTGTGGGGCATCGATTTCATGGGGCCTTTTAACCCACCATCTCATGGGAACAGCTACATCTTGGTGGCTGTAGATTATGTCTCCAAGTGGGTTGAAGCAATAGCCTGCCTGCCAATGATGCAAAGATAGTTTTGAAGATGTTCAAGAGTATCATtttccccagatTTGGAGTGCCAAGGGTAGTGATCAGTGAAGGAGGATCTCACTTCATCAACAAGCTCTTTGAGAATCTATTGAAGAAGCATGGGGTTAAGCACAAGATAGCTACACCATATCACCCTCAAACCAGTGGGTAAGTGGAAGTGTCCAACAAGCAGATCAAAACCATTTTGGCAAGAGTAGTAGGGGTTTCAAGGAGAGATTGGTCTTCTAAGcttgatgagactctctgggcttatcggACTGCATTCAAAACACCCATTGGGAGAACACCATTCCAGCTACTCTATGGTAAGGCTTTCCATCTGCCTGTGGAGATTGAGTacaaggcattgTGGGCAACAAAACTCTTGAACCTAGATATCAAGACCGCTCTGGAAAAGAGAGCATTGGATCTGCATGAACTAAAGGAGATCAGGTTGGATGCTTATGAGAGTTCTAAAATTTATAAGGAGAGGACTAAAGCCTTCCATGACAGGAAGATTTTACCCAAGGAATTCAAAACTGGTGATCAGGTCCTCCTATTCAATTCTAGACTCAAGTTGTTTCCAGGAAAATTGAAGTCTAGATGGTCAGGACCATTTGTTATCAAGGAAGTTTCACCATATGGGGCAGTCACCTTGGTCGAAAAGTACGGAAAAGAATTCACAGTGAATGGGCAAAGGATCAAACCGTACATGGCTGACAGCATCATTCTAGAAGGAACCTCAATTCCTCTGGATGAACCTCTCCTTGCTTGAGTAAAACaggaagtcaagcttagtgactataAACAAGCTCACTTGGGAGGAAGTTCCATGTCTATCCTTGTATATATTGCTTAAATTTTTTTTTTA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_77Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1736Start:
660128End:
661863Strand:
+>Scaffold10040_LTR-Gypsy_77
TACACTCGAGAAAGCATGGAGGATTCAAtctcctccttCTTCTCCAACCCTTGAGGTACCTGTTCTGTCTATCCCTGTATATATCATTTGCATTTCTTTCTTGCTTTTTGTTGTTTCTTAATCCTtctttctaaatttttattacacaagggactgtgtaatttaagtttgggggaagggttaagatctgtttgacatgtttattgtgttcttattttccattttcgtGCATATTTGAGTTTGCATGCATCTAAGGCATAGAAAAACCAAAAAAATTTGAAAATTTTTCAAAAATGATTACAAAAACAGAGTGTTCATGTAGTTGCATTAACATTTTAGGATTGAGTCTAGATTGTTTTCATATAGGGCTGTTGCATATGcataggggattatgatgattatgaccttgcaagcttgctgatttaatatgataatttcaatgccctcgtttctagttgtctaatgcattgttaatgaacttgaagtaagactgcaccatactttgaatgcacaactagattattgtctcaattgaagcatgctgtgatttgataccattccctatctatttgaacctgaacttgacttataattatcatgtctatgcactgcatctgaactcatggataccatatacatacttggattttctttcacctgtttaccactcttgctaatccaagtagctgttctcatCATTAGAACAGTTTTACCATGCCCTTAGCCTAGCCTTCTTTCAAGCCATGCTATTACTTTAGTGAGTGTGTGAGGCCTATTTCTGAATGAGATTGGTAGAAAGTGTTAGGTTtgagccgacaaggatagagtctcaTGTAGTTCTGGTTTGCAATTTTTGAATCAGATAGGACTAGGTGGGATCTTAATCATTGGGCATAGGGTTTGGTTCTGTGAGAAGAAAGAAAGAAAACTTGGAGAaaaatgaaagaAAAAGGTTAAGAGTTCTTAGGAGAGGAATAATCTGAAGTGTCTTAATCTAGTAAAGGATTTGGAGGTGTGCTAAGTATAAGAAAATAAAGGGCAAAAAGCTTAAAGTCTGAAAAACATAGAAAAATGCCTAAGCTGGTAATGAAAAAATAAAAAAAAGAGAGCCATAAGAAACCTCAATCCGCTAGAAGTGTATAAAGCCTCTCCTAGAACAAGAATAAAAGAAAAGAAATGAATCTGATCCAAGAAAAACAAGGCAAAAACGCCTAATGTGTTAAGGGTAGAATTAGGGTGACTTTCTAGGTTTAGAACTATAGGTTAAGAAGACTTATGTATGGTTGGGTAGATGAGAGTCTATtcttgtatgcaTAGGTTGGTTCTTACCTTTAGCATTCTACTGAAGCTCATTCGCTTTCTTGAGAGATCCCTGCTTTGAAATGATTAACCATATGGAAGGGACCATCTTTGTctcttgaccttacccttaaccaaatgagttcattgaatgtgcatagcttgattcatggtttctgcttaattgaatattaaagggaatggtagatttgaatgcatgtctaggttgagacttgattgaaattgtgctgtgaagagtatggctaaagtttttaagtagagttcatatgctttgcattctagaactagcaacttggacattgagataatctattatatcagcatgctttggttctgaatctccactttcaaacctcttctccatcttattcttatCTGTTTGCTTGAGGGCAAGCAAAGACTAAGTTTGGGGGAGT
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_78Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
173Start:
661864End:
662036Strand:
+>Scaffold10040_LTR-Gypsy_78
TGATATGTCGATATTTTACATGGTTTTAGCATGCATTTATCACCCGTTTAGCCTTGATTATTAGCATATTCTTAGCATttgtctctagTTTTGCATACTTAGAGTGTTTTGCATTAGGTTTTCATGTATTTTGCATTTTGGAGCTGTTTTAGGTACATTTAAGGGATTTTGGA
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_79Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1002Start:
662380End:
663381Strand:
+>Scaffold10040_LTR-Gypsy_79
ACTTTCCTATTTTGTCTTTTTGTGTTTTAGGGTTTTTTATGTTTTAGTAtaaataccccTTGAGGGTTTAAGACAAAGAAGTTTTTTATGCTTTAGAGAAGTTTTAGCTCTCTCTTTTTCTGTTCTTGCTTTCTAGATCTTGTAACTTTGATTCTACTTGTTATCTCAGTTTGATTTCTTCTATTTCATCATTTCTCTTTCTTATCTCTTTACTTATGCAAGTATTTCGTTTTCTGGGTTTGTGATTATGCTGCTTTTCATGTGTTCTGAGTAGTCATTAGGGTTCTTGAGGATGGGTTAGATTAGgtgtggaatcttagtctcctaggtggtttaagagtagattgcttgatttcccttctagattagtgttcttaatgctaattactctctgatcaattgaaattagaacataggtttttccacacccagaaggtgtttgatgaaatgcctgactgaattaattctagagatttacattcctagcctaagggattagttgtctagggtgtttattggctttaacaaactgaatctcaatgcctgttattctagatttcgctaagggattaggtctggaactagattagcttgaggttatctgtcacggaagtggatttagctgcttatgagtttgttgtctagggaaTAGCTTGTTTAAGTTTGTTAAACCATCTAGGTAGATTAAGAGGATACACTTAGTCTATAACCCCCATCCTTAAGAGCTTCTTTTCCTTGATTGATTTCTGTTTCATTATCTTGCTAGTTTCTTTCAGTAGTTATCATTCTGCTATTGCTCTGTTTTCATTTCGCTAGTTACTGCTAGTCTCTGTTTTTAGTATCTATTTTCAGTCTCTATTAGGTTGATAGCTTCACATCTCATTGCTTGCTTGGCTTGACTTAGATAGTTTGATTGCATCCTTCTTGGTTAATATCGCACCCATTTGGATTGACACctttctgtattacaatgacatgaaTATGCATTAAGGCATTTGACAG
Boechera stricta (v1.2)
ID:
Scaffold10040_LTR-Gypsy_80Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
122Start:
671603End:
671724Strand:
+>Scaffold10040_LTR-Gypsy_80
TGGAGATCGAGATAGGAAAGAAATTTCCACTCTGTAAATGCTCAGAGGAGTATGAGTTGATCTCTTGGTGCATCACTTAGAGGGAGATGCacatatgtggTGGAGTAGTGTATTGGCTAGGA