ID:

Scaffold10040_LTR-Copia_61

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

316

Start:

701161  

End:

701476

Strand:

-

>Scaffold10040_LTR-Copia_61

GATCGATCGATCCTCGTCAAGATCGATCGATCCTTACAAGTCAAATCGTCTTAGAAGCTTTATAGATCTTCAGATCGATCGATCCACTTTGAGATCGATCGATCCTGACATGTCAAATCATCAAAAAAGCTTTGAGAATAACCAGATCGATTGATCCTCGTCAAGATCGATCGATCCTCACACGTCAAATCGTCTTATAAGCTTTGTAGATCATCGATCGTTCCACTTGAAGATCGATCGTTCCTGACATGTCAAATCGTCTCAGAAGCTTTGAGAGCAACCAGATCGATCGATCCACTTTCCAGAACGGTCGATC

ID:

Scaffold10040_LTR-Copia_62

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

223

Start:

729738  

End:

729960

Strand:

-

>Scaffold10040_LTR-Copia_62

TCATGAAATTATCAAACTTCTTGTACCACTGCCTAGGAGCTTGTTTTAATCCATACAAGATCTTCTTCAATTTGCATACCAGGTCTTTctttccttccTCTATGAAGCCTTCTGGTTGCCTCATATGGATCTTTTCCACCAAATCGCCATGAAGGAAGGCTGTCTTTACatctaactgctCAAGATGTAAATTCTCCGCCGCCATAATTTTGAACACCAGTCT

ID:

Scaffold10040_LTR-Copia_63

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

226

Start:

730727  

End:

730952

Strand:

-

>Scaffold10040_LTR-Copia_63

GGTCCACGATTGATCAAGTAATCCGCAATGTTAACTGCTTCAGCCCATAACATCTtaggtaaaccgGCATGTATCCTCATACTTTTGGCACGTCCATTCAGAGTTTTGTTCATGCGCTATGATACGCCATTTTGTTACGGCATCATGGGAACTGTTTTTTCCATCTTGATCCCATTACTTGCGCAAAATTCTCCGAATCTTTTATCTATATACTCTCCTCCATTGT

ID:

Scaffold10040_LTR-Copia_64

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

123

Start:

782315  

End:

782437

Strand:

+

>Scaffold10040_LTR-Copia_64

TTAATAATGTCAATCAAGCAGGGGGAGATAATGTATGGTGAAATTTCACCTTCTCAGTAGCATGATGTGAATGCAGAAAGTGAAGTTTAAGGTTTTAAACACGAAGCTGATTATACTGATGCT

ID:

Scaffold10040_LTR-Copia_65

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

154

Start:

804205  

End:

804358

Strand:

-

>Scaffold10040_LTR-Copia_65

AATCTCCACCTGAGAACATGATGATCAAATCAAACAACCTGCACAAACTTAAGAGAGATAATACCTTCTACTAGTTTCTTGGATTCCAATTTTGGTTCCTGAATATCCTTACTCAACCTTGATACTTAGCAGTTGAAAAAACCATAAACTTGCT

ID:

Scaffold10040_LTR-Copia_66

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

155

Start:

817884  

End:

818038

Strand:

-

>Scaffold10040_LTR-Copia_66

TATTTCCAATTGAGTATCTCCTTTGAAGATCAGTCCACAACTTATGAGCATCCGAGGTGAACGTCACAGTGGATCGTATACTAGGTGAGATCGATGCTCGGATCCACCCTACAATCATTGAGTTTACTGTCTTCCACAGTTCTGCCTCCACAGGC

ID:

Scaffold10040_LTR-Copia_67

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

101

Start:

818068  

End:

818168

Strand:

-

>Scaffold10040_LTR-Copia_67

TTCTCCAATTCTGATGCCCATTCTGCATAATTTTCTCCATTGAGCATGACAGGAGAAATCGCAGTTGGTTAGAGGGCGAGAGAAAATATGGTGAAGACATA

ID:

Scaffold10040_LTR-Copia_68

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1377

Start:

819881  

End:

821257

Strand:

+

>Scaffold10040_LTR-Copia_68

agagagttatgGAGACGATGTCACATCTCGTGGCTCCGATCTTCAATGGTGAGAATTATGGGTTTTGGCATATCAAAATGAAAACAATTTTCCGGACAAAGAAATTATGGGAAATTGTTGAAGGAGGAGTTCCAAACCCAGCAGCACAAGAAGATCGCAGTCCCAAAGCCGTGCAACAAAAGACTCGGTGTGATGAAGCATCCTTAAAGGATTTGacggcattgcaaattcttcaatccgctgtctctgatgttatttttcctcgcatagcaccgacaacgagtgctaaaggtgcgtgggatgctctggaaatggaATTCCAAGGATCTCCTCAAGTGAGGATGATAAAACTTCAATCTCTTAGAAAGGAGTATGAAAACTTGAAGATGGAAGAAAGTGATAACATTAATACCTTTACGACCAAGTTGATCGAAATCGGAAATCAACTAAGACTTCATGGCGAAGAGAAGTCTGATTATCATttggttcaaaAAATATTGATTTCTCTTCCGGAACAGTTCGATAGTATTGTAGCCGTATTAGAGAAAACCAAGGATTTATCAGTTCTgtcaatgacgGAGTTAATAGGGACGTTGAAAGAACACGAGAAGCGTGTGGAAATCCGAGAAGAACgatcaacggaaGGTGCATTCTACGTTAGATCAAAAAGAGAAAAGTTTGTTTCAAAATCGGGAAACAAACAAGGAGATAAATGGTGTGGTGCTTGCATGCGTGACAATCAtaatgagagtgattgttggaagaagaagaacaaaggtgttctTTCACAAAAAGTGGTGAACAATGAAAGAAAATGTTTCGTGTGTAACAAACTAGGACATTTGGCAAAGAACTGCAAACTTAGGAAAGCCGAAAGAGCGGATCTAAGTCTAGAAGAAACAGATGATGACGAAGACAATGAGGGTCACATGTTGTTTAGTGCGGTTGAGGAAGAATCATCATTAAAAGTAAATGATGAAACAtggttagttgacagcgggtgcactaaccatatgaccaaggaagttaaatacttcatcactcttgatcggagtataaatgttccgatcaaagtggggaatggtcaacgtgtaatgacggcggaaaaaggaaacatccaagtgatgacaagccaatgagagaagatcatcaaagaggtgtttctagtgccgggtttagcgagaaacctattgagtgtTTCTCAAATGGTATCAAATGGATACGAAGTCTTATTTGAAGACAATAGATATTTCATCAATGATCCTCAAGGAAGAAGGATATTGAACATTAAGATGAAGCAtaagagtattccattcagatggagtaactcgagagaaagcgttttacttgcttgtgaagaagaaagaaAGAAACCAA

ID:

Scaffold10040_LTR-Copia_69

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

155

Start:

821290  

End:

821444

Strand:

+

>Scaffold10040_LTR-Copia_69

GAAGCTGAGAAAAAGAAACTTATAAAGCTGGAGTATTGCCCTGGagaatctcaagTTGCTGACATTCAAACTAAGCTTTTAAACACGTAAAGGTTCGAAGACTTAAGGGAAAAGTTAGGCGTGAAAACGAAattcaattaaggaggagtgttagt

ID:

Scaffold10040_LTR-Copia_70

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

101

Start:

823318  

End:

823418

Strand:

+

>Scaffold10040_LTR-Copia_70

acgaccttacaccacaacacaataaggatcgatcgatcTCACCCAAGATCGATCGATCATGACCGATTGGATCGATCGATCTCACCCAGGATCGATCGATC

ID:

Scaffold10040_LTR-Copia_71

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

374

Start:

823343  

End:

823716

Strand:

-

>Scaffold10040_LTR-Copia_71

ggatcgatcgatcTCACCCAAGATCGATCGATCATGACCGATTGGATCGATCGATCTCACCCAGGATCGATCGATCTCGTTTTCCTCCCTAAATCCTTCCTACTCTCTGCCCAAAATTGAACCCTCAGGATCGATCGAACCTCCTTAGAACGATCGATCTAgagatagaggATCGATCGATCTGTTATGGATCGATCGATCTCGAGACCCCGAACTCCTCTAGAGCTCTCTGGCCAAAAATGGCCCCCCAGGATCGATCGTTCTTgcccaggaacgatcgatcttgataccccaatttcgtccagagagcacatttaatcaaacaacttttcaggatcgatcgttcttgcccaggaacgatcgatctctacccc

ID:

Scaffold10040_LTR-Copia_72

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

129

Start:

823755  

End:

823883

Strand:

-

>Scaffold10040_LTR-Copia_72

cctcaggatcgatcgttcttacccaggaacgatcgatcttgaatccccaaggacttctgccacataacgatattacaggatcgatcgatcctatatggatcggtcgatcccttcttgtcctgcaaccca

ID:

Scaffold10040_LTR-Copia_73

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

373

Start:

886344  

End:

886716

Strand:

+

>Scaffold10040_LTR-Copia_73

TTTAAATTCGTTCAAACCGTAAGAAAGCTCTCGGTAGTAAGTGGGTTTTTATGATTAAGCTTTGGTCGGATGTTACGATTAAGAGACATAAAGCTCGTCTCGTTGTTCTTGGCAATCATCAGAGAAAGGGTATTGATTACATAGATAAGTTTTCACCAATGGCAAAGATGACTACGGTTCATGTGGATGTTCATAATGTTTTCCTTGATGGTGATCTTCATAAGAAGTCTACATAAAATTACCTCAAAGCTTTTTTTTTCCAACGAAAACTCGTTTATGTCATATCCGTAAATTATTATACGGGTTGAAACAAGCTCCCCATTGTTGGTTTGTTAAGTTTGATGATGCTCTTCTCAAGTATGGATTTTCACAA

ID:

Scaffold10040_LTR-Copia_74

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

179

Start:

955585  

End:

955763

Strand:

+

>Scaffold10040_LTR-Copia_74

GAAGACAGGTCGATCTGGCCAgcagctgaagcAGATGCAGAGTGAGACCTCAGATCGATCGATCCACTACTGGATCGATCGATCCACTACTGGATTGATCGATCCACTTTTGCATGACATTTTAAGATCGATCATGGCACCCAGGATCGACCGAtccacaccctgATCGACCAATCCAA

ID:

Scaffold10040_LTR-Copia_75

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

124

Start:

955656  

End:

955779

Strand:

-

>Scaffold10040_LTR-Copia_75

GGATCGATCGATCCACTACTGGATTGATCGATCCACTTTTGCATGACATTTTAAGATCGATCATGGCACCCAGGATCGACCGAtccacaccctgATCGACCAATCCAACCCTGATCGACCGATC

ID:

Scaffold10040_LTR-Copia_76

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

402

Start:

1053874  

End:

1054275

Strand:

+

>Scaffold10040_LTR-Copia_76

TGTTGGATATGATCAAGTCTTCATTTATTTtattatcttagAAGAGTCATATATTATATAGTTAAGTAATTTATTTATAAACTATTCGTATCACACACCGAAGAGACACGAATAAGATTTGTTAACTGCAAAACAGTTACATGAGTGTGTTTGTGTCtctacattggggtgttttctagagacatttcccttagtgaaagtgtgtcTTGTAAACCTATAAATACAGTTTATATATCAAATAAAACAGTGTGGTTTTTGTTTACAAAGATCGCGCATTCATAACAAAGTAAAATACTTTGAGTGTTCAGCAAGAAACCGAGAGATAGACAAAAACAGAGTAAAATCTGTGTTGTCCGATACTTTACGACTTTGAGAAATCAAAGTTTTACATGGTATCAGAGC

ID:

Scaffold10040_LTR-Copia_77

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

4005

Start:

1054264  

End:

1058268

Strand:

+

>Scaffold10040_LTR-Copia_77

TGGTATCAGAGCCAGGTTGACAACAATGCAGCAAGTTATTCCaatcttcaatGGTGAATCGTATGGCTTTTGGAAACCATCTTGAAAATACGAAAGTTGTGGGATGTTATCGAGAATGGAGTTACGTTGAGTTCGTCTTCTGAAAACTCACCGGCGTTAACCAGGGAGAGAGATGATCAAGTGATGAAGgatatgatggctcttcagatccttcaaagcgcagtttcggattcaatatttccgagaatcgctcccgcatcaagcgcaagagaagcttggaacgctttggaaatggagttccaatcttcagaccttgagaagagaatatgagaatctgaagatggaggaaagtgaaaccataaatgatttcacaaccaagttgattaacatgagtaatcaactaagagttcatggtgaagataagaccgattaccaattggtgcaaaaggttcttatctctttgccgcaaaagtttgatagcatcgttgctgtccttgaacaaacaaaggatctatcaactctctctatgacagagatgataggtactttgaaagcgcatgagaagcgcttaagtctccgagaagaacgtatcaatgagggtgcgttttatggagaaaagcttggttcgaaaagaggaaacaagcaagacaagaaacgccatgagaagaccaataagtggtgtggcgtgtgCAAAAGAAACAATCACAATGAGGTAGATTGTTGGAGAAAGAAGAACGGAGACGTTCCGAAAAGAGTGCGAAAAACAAAAGAAAATGCTATGTGTGTGATAAATCGGGACACATAGCTAAAGATTGTAAACTTAGACGAAGTGAGAGAGCACATCTAAGTTTTGAAGAGTCAAAAGATGACAATGAAGATGAATGTCATATGCTCTTTAGTGCTGTTGAAGAAGAAGAAGCTTCAACAATTTGTGAAGAGACATGGTTGGTGGAtagcgaatgcaccaatcatatgtctaaagatgcaagatattttagcaccttgGATCGTAGTAAGAGAGTCACCATAAGGGTTGGAAATGGTGAAAAAGTCTTATCGGAGGGCAAAGGAGATATATGAGTCTCTACGAATAAGGGAGTACATATCATCAAAGATGTACTTTTCGTACCCGAACTCGCAAGAAATTTGCTAAGTGTCtcgcaaatgatATCTAATGGATATCGGGTTATATTTGAAGAAAACAAGTGCATGATTCAAGATCCAAATAGGAGATAAATCTTGGATATTAAGATGGAAGACaagagctttcCAATACGTTGGAAAAAGTCAAGTGAAGATGCTTACGTTGCATGCGAAGAGAAGGAAGAAAAGACAAATCTTTGGCATAAGCGTTTTGGTCACGtaaactatgacaagatggagacaatgcaaaagctaaagattgtagaaaatcttccaaagtttgaagtggtgaaaggtgtatgtgagtcttgtgagatgggaaaacaatcaaggaggagttttccgaaaaattctcaaagcaatacaagcaatgtattagatctcatacactcggacgtgtgtggtccaatgcaaaccgaatcaataaatggaaGTAAGTACTTCCTAACATTTATTGATGATTATTCAAGGATGACGTGGGTCGATTTTATGAAGAGCAAGAGTGAAGTGCTCTCAAAATTCAAGATATCCAAGCCTTATGTGGAGAATCAATCGGGAACTCGGATTAAGAGGCTTAGAACGGATGGAGGTGGTGAGTTCATATCAAaagaattcatcaagctatgtcaagacagtggcatacatcgtgaagtaacaacaccctatagtccacaacaaaacggtgttgcggagagacggaaccgtacgcttgtggaaatggctagatcaatgctcacggagaagagtttatcaaacaagttTTGGGCTGAAGCTATTGCAACATCAACTTATTTGCAAAATAGATTACCATATAAGCCATTGGAGAAAGGTATGACTCCATTAGAAGTATGGAGTGGGAAGAAACCAATTGTACATCACTTGAAGATATTTGGGTGTGTATGTTACGTACACGTTCCAGATGAGAAGAGAAGAAAACTTGACACTAAAGCCAAGCAAGGGATATTCGTGGGTTATAGCAATGAATCAAAAGGATACAAAGTGTTCATACTAGGTGAAGCGAAGATCGAAGTGTCAAGAGACGTGACATTCGATGAAGAGAAGACATGGAATTGGGATAAGAAGGAAGTGAAGAAATCAAGGATTTGATGAGCAAGTCTTCAAGGGAACAAGGAGATCAAGGAGCAAATAACGATATAAACGctcaagttgaacaagtAAGTGATGCATTCAACCGACTACAAATCTCAAATAGAGGAGTTCAAAACATGGTTAAAGAAGGAGAAACATCTGTTGGTCCAAGAGGATTCAAATCGATCAACGATTTGATGCAACAAGCTAATGAAGTGGAAGAGATGGCACATATACATGAGATGTGTCTTATGATGGcagaagaacctcaggctttggaggaagcaatgaatGACGTGAAGTGGATAGAAGCCATGAGAGAAGAGTTGAGGATGATAGAAAAGAACAAGACGTGGCAAGTTGTGGAGAGACCAAGCGATAAAAATGTGATTAGTGTCAAATGGATCTTTCGtttgaagactaatgcaagtggagaagcaatcaaacacaaggcgaggttggtGGCTAGAGGATTCACACAAGAATATGGTGTGGATTATCTTGAAACCTTTGCACCGATTTCAAGATACGATACGATAAGAACGTTAATGGCGATCGCAGCTCAACACAAATGGAAACTCTTCCAAATGGACGTGAAGTCAGCATTCCTAAATGGAAACTTGGAAGAGGAAATTTATGTAGAACAACCACCGGGATTTGTAGAAGAGGAGAAGAAGGAAAAGTTCTTAAACTCTACAAGTCGCTCTATGGCTTAAAGCAAGCACCTAGAGCATGGTATGGGCTCATAGATGGTTACTTTATTGTCAAGAATGGTTTTGAGAGAAGTATCAATGATGCGGCACTCTATgtaaagaagaCATTGGAGGATATATTGGTGGTTAGTTTGTACGTTGACGACATCATCATCATCGGAAGCAACATGAAGAAAATTGAAAGGAGAAGATGAAGAGTGAGTTCGGGATGACGGACTTAGGCGAACTCAATTACTTCCTTGGCATGGAAGTAATACAAAATGAAGAAGGTATATTTCTATCACAAGAAAAGTATGCAAAGAAGCTCTTGAAGAAATTTGGGATGCAATATTGCAAAAGTTTGTCAATGCCATTGACTCCTCACGGCAAAACAGAGGAGGTTTTGAATGAAAAGCTTGAAGAAGTTACGAAGTATAGAAGCATGATTGGAGGCATATATATTGTATCTTTGTGCTTCCAGACTAGACATCATGTTTGCTAGTTCTTACTTGTCTCTCTACATGACATCTCCATTAAAGCAACATCTTCAAGAAGCCAAACAGGTCCTTAGATACGTCAAGGATACGATGACATATGGGATTCATTTCAAGCAAGTAGAAGAACCAGAGTTGGTGGGATTTTCTGATAGCGATTGGGGCGGATCAGTTGAGGACAAGAAAAGTACAAGTGGCTCTGTCTTTACGATTGGATCGGGTGCATTTTGTTGGAATTCAAGCAAGCAGAAGACGGTTGCTCAATCAACGGCCGAGGCGGAATACATTGCTGTTTGCTCAGCAGCAAACCAAGCAATATGGTTACAGAGGCTAGTGaatgagattggTTTCAAGGCAGAGAAAGGTGTAAGGATCTTCTGTGATAATAAATCAGCAATTGCAATCGGAAAGAATCCAGTTCAACATCGTCGGACCAAGCATATCGAcatcaaatatcattttgtacgaGAGGCTGAACAGAATGGGAAGATCAAACTTGAGTACTGTCCAGGAGAGTTACAAATAGCAGACATATTGACGAAGCCCTTAAACACAACAAGGTTTGAGGTTCTACGAGATGATCAAGG

ID:

Scaffold10040_LTR-Copia_78

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

385

Start:

1058274  

End:

1058658

Strand:

+

>Scaffold10040_LTR-Copia_78

TGTTGGATATGATCAAGTCTTCATTTATTTtattatcttagAAGAGTCATATATTATATAGTTAAGTAATTGATTTATAAACTATTCGTATCACACACCGAAGAGATACGAATAAGATTTGTTAACTGCAAAACAGTTACATGAGTGTGTTTGTGTCtctacattggggtgtcttctagagacatttcccttagtgaaagtgtgtcTTGTAAACCTATAAATACAGTTTATATATCAAATAAAACAGTGTGGTTTTCGTTTACAAAGATCGAGCATTCATAACAAAATAAAATACTTTGAGTGTTTAGCAAGAAACAGAGAGATAGAAAAAAACAGAGTAAAATCTTTGTTGTCCGATCCTTTACGACTTTGAGATATAATTCTA

ID:

Scaffold10040_LTR-Copia_79

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

269

Start:

1180402  

End:

1180670

Strand:

+

>Scaffold10040_LTR-Copia_79

TACAAAAGGAGTTCATTTTATAAAGTTTTTGTATTTTGTGATGTTGATATGCGGCTGATCCCGATCGATAACGTAGATCAATTACTAGGTTTGCATTTTTAGCTGGAGAAAACATATTGAGCTAGAAGTCTACGTTTCAAAAGGTTGTAGCATTTTCTACGACATAGTCAAAACAGAATATGAATCTAACTTGGGCAGTGAAAGAAACTACTTAAATTTAAAAGTTTGTGTGATGAATTTGGTTATCATCAGGATTGTGTAGAGATCCT

ID:

Scaffold10040_LTR-Copia_80

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

114

Start:

1201109  

End:

1201222

Strand:

-

>Scaffold10040_LTR-Copia_80

GCTGCGATCAATCGATCCTATAAGAGGATCGATAGATCTATGTTTTCGGGGGATTCAGCGAGTTTTGACAGGTTAGGATCGATCGCTCCTAGAGGTGGATCGATCGATCGCTCC