ID:

scaffold101|size326356_LTR-Copia_41

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

88

Start:

243885  

End:

243972

Strand:

+

>scaffold101|size326356_LTR-Copia_41

CTAGTGAGTGGTCAAGCTCACCGAGACATACCTTGGCGGTAAAGCCTTGGGAACTCGTAAATCTCGTGTCTTTTGTTTTCGTTACTCT

ID:

scaffold101|size326356_LTR-Copia_42

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

707

Start:

245141  

End:

245847

Strand:

-

>scaffold101|size326356_LTR-Copia_42

CCTTTTGGAGACCAATGTCTTTAGTATCTTATATGTTATATCTTCGATTTCCTCGTTAAAAATCCTTCTAAAAAAATCCTGTGGAAAAACCATAGAAAGATATAAAGAGTGCAGCCACACAAACTCTCCTTCAAGTGAACAAGATTACATTTCATAAGTCTCAGTGCTGATGCATTTCAATATTATGGACATACTTTCTGAATGTTGAGGTAGGCAGTGACTTTGTGAAAAGATCTGCAGCATTATATGTTGACCGAACATATCTCATTCAATATCTTTATTCTTCTGAAGTTCTTGGGTATATGAGAAGAATTTCGGGTGAATATGTTTGGTTTTATCGTTTTTGATATATCCTTCTCTCGTTTGAGCAACATACGCTGCGTTATTTTCATATATGATAGTTGGCTCCATACTAGTGTGAATTCCGCAACTTGATCGGATGTGTTGACTTACTGACCTACTTACTTCATGAAGTGCGATGACTTCAGCGTGGTTTCAAGAAGTAACTACAAGTTTCTGCTTCTAATAACGCTAAGATATAGCATTGCCTCCGATAATGAATATGTAACCTGTATGCGATCGGGGTTTGTGTAAATCTGACAAATATCCTACATCTACGAAACCAACCATTTCACTATTTGAATTGTTAGGATAAAATAGTCCTAACCCAATAGTTACTTGAAGATAGCGAAAGACATGTTTGATCC

ID:

scaffold101|size326356_LTR-Copia_43

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

105

Start:

254389  

End:

254493

Strand:

+

>scaffold101|size326356_LTR-Copia_43

GATCGATCGATCCCACCTTTGGATCGATCGATCTCGACTAGCAAAACAGAGCACCACAAGACAGAGTGATGCCGATCGATCGATCCTCCCTAGGATCGGTCGATC

ID:

scaffold10239|size415_LTR-Copia_44

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

356

Start:

54  

End:

409

Strand:

+

>scaffold10239|size415_LTR-Copia_44

ATAAAGAGTGTGAAGCTTGTGTGTTAGGAAAACATTGTAGAAGTAGCTTTCCGGATTCAAGTACAATGTATGAGAAGTGTTTTGAGCTAGTCCATTCGGATGTGTGGACAGCTCCATGTGTTTCTAAGGATCAATATAAGTATTTTCTGTCATTCATTGATGAGAAGTCCAAGTATACATGGGTGACACTAATGGGTTCCAAAGATCAAGTGTTTGAATCATTCACCAAATTCTACAACTATGTGGAAACACAATTTGGAGCAAGAGTTAAGATCCTTAGAAGTGACAATGGAGGAGAATACACAAGCAATTAGTTCAAGAAGTTTGTGGATGATAAGGGGATAGTTCATCAAACT

ID:

scaffold10246|size415_LTR-Copia_45

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

413

Start:

1  

End:

413

Strand:

-

>scaffold10246|size415_LTR-Copia_45

CTTCGTCCGATCCCCTTTGATATAACCGTCCTTGAGCTGAGCAATGCAAGCCGCGTTATCTTCAAACATAACCGTTGGCTCCTTATCTTCGTTCATACCACAATTTGATCGGATGTGCTGAGTCATGGACCGCAACCAGACACACTCTCTACTAGCTTCGTGAATGGCCAAGATTTCCGCATGGTTAGATGAGGTGGCAGCGATTGTCTGCTTCACAGATCTCCATGAGATAGCTGTTCCTCCATGCGTGAAAACATAACCAGTCTGAGACCTGGCACAGTGCGGATCCGATAGATATCCTGCATCAGCAAAACCAACTAGCCCATCCTTGTGTTGGTTAGTGTAAAACAATCCTAAGTCCTTAGTCCCTTGTAGGTACCTTAGGATGTGTTTAATACCGTTCCAGTGCCTTT

ID:

scaffold10254|size415_LTR-Copia_46

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

154

Start:

1  

End:

154

Strand:

+

>scaffold10254|size415_LTR-Copia_46

AGAGCATTAAGTGCGTGTTTGTTGGATACTCAAGCACTCAAAAGGGCTACAAGTGTTATGATCCAGAGACAAAACGCATATATGTATCAAGAGAAGTCCGGTTTGATGAAGAAGTGGGTTATTTCACCGAGAAGAAGTGGGGAGACTTAGAAGA

ID:

scaffold10257|size415_LTR-Copia_47

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

327

Start:

87  

End:

413

Strand:

-

>scaffold10257|size415_LTR-Copia_47

AAATAGGCTCCTTGAACCTTCCTCCTTTTGAATCTGCATACAAACCTCATTCAAACCTGGTAGTTTATCAAACCTCAGAATGTGTTGTATGAGTCCTCTATAGGAGTTGTTAAGAGTAAGCAGCAATCCGAACACCTGGTCTTGCTCTCTCCTCTCATTCTGTTCTTTTGGATCATTAGTTTGTGGCCTGAGCATCTCCAGCTCTGCCCACAATCCTCTAAAGTCTCCAAAGAGTTCTTTAAACGCCTTCTGTTCCTGTTGAAGATCATTTAAAGCTTTCTTTACCTCAAAGATTCTTGAGATATTAGACATGTTTCCATACACCCC

ID:

scaffold10261|size415_LTR-Copia_48

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

356

Start:

58  

End:

413

Strand:

+

>scaffold10261|size415_LTR-Copia_48

TGGAGACAAGAAAGCACTAGTTTGTGAGCATTGTAAGATGAAAGGTCATAGCAAAGAAAAATGCTGGACTCTTCATCCACACTTGAAACCGGCTAGGCTGAGAGGAAATGGCCAAGGGGGCGGTCAAGGGCAAAGGGTGTTTGCTGGATTAGCTCTAGGTGAAGAGGGTAATGGGCTGGTTCGAAAATCTGATTTTGAAGCTTTGATCAAGAGCATTGCAAGGCTCACCGAATCAGGTAAGAGATGTTTTGTTTCTAAAATTCAGAACAAGGTTATTGTTGATTCGGGTGCTAGTCACCATATGATTAAGGATGGAACCTTATTAGCTAATGTTAGACCTCATGGTGGAATGGTTA

ID:

scaffold10278|size414_LTR-Copia_49

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

414

Start:

1  

End:

414

Strand:

-

>scaffold10278|size414_LTR-Copia_49

CTTGGTGTGCCCTTTCATTTTGCAATGTTCACACTCGAACACCCTTTTTTCTCCATAAGGCTGGTTCTTATACACCACATGAGCCAGTTCAGAAGTAGATTGAAATAGGCTCCTTGAACCTTCCTCCTTTTGAATCTGCATACAAACCTCATTCAAACCTGGTAGTTTATCAAACCTCAGAATGTGTTGTATGAGTCCTCTATAGGAGTTGTTAGGAGTAAGCAGCAGTCCGAACACCTGGTCTTGCTCTCTCCTCTCATTCTGTTCTTTTGGATCATTAGTTTGTGGCCTGAGCATCTCCAGCTCTGCCCACAATCCTCTAAAGTCTCCAAAGAGTTCTTTAAACGCCTTCTGTTCCTGTTGAAGATCATTTAAAGCTTTCTTTACCTCAAAGATTCTTGAGATATTAGACAT

ID:

scaffold10279|size414_LTR-Copia_50

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

199

Start:

1  

End:

199

Strand:

-

>scaffold10279|size414_LTR-Copia_50

CATACCCTGATGTGCTTTTCATATCCTTTGTAGAACCACCCCAATCGCTGTCCGAGTAGCCTATCAGTCTTGGTGTCTCCACGCTTGTGAAATTTACTCCAAAGTTTAATGTTCCTTTCACGTATCGTAACACCCTCTTTGCTTCTTGATAATGCTTCACGAGAGGTGATGACATGAATCTTGAAAGGTAGGAGCTTGC

ID:

scaffold10279|size414_LTR-Copia_51

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

91

Start:

204  

End:

294

Strand:

-

>scaffold10279|size414_LTR-Copia_51

AGACATGCTTCAAGCCGCTTCTTCAACATCCACCCTTGGCTCTATTTCCATGATCTCTTGCATCGATCTGAATTTTCTTGGAGGCTCAGAT

ID:

scaffold10279|size414_LTR-Copia_52

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

102

Start:

307  

End:

408

Strand:

-

>scaffold10279|size414_LTR-Copia_52

TCTTCATTGGTATCATGATTTTCATGTTGAACTAAAACAGGACTGGAGATGTTTTCGGCTTGATCTCTTGCTATTTGTTGATCATCGATGGATAAAACAAAA

ID:

scaffold10288|size414_LTR-Copia_53

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

138

Start:

164  

End:

301

Strand:

+

>scaffold10288|size414_LTR-Copia_53

AAAAGATGAAATGATTTCCGCCGAGTAGAGGGGTAGAAAAATTTCCTATGACCCATTATTCTACTTGGATAAGGAATGATCACACAAAGGCCTGAAGTGAGGGGTAGGAAAATTTCCTATGACCCCATTATTCACCTA

ID:

scaffold10291|size414_LTR-Copia_54

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

123

Start:

245  

End:

367

Strand:

+

>scaffold10291|size414_LTR-Copia_54

CAATTCATGGAGATGCAAAAGCAAGCTGTTCTACCAGTTGTTCTCAAGGGGAATAACTACTTGTTGTGGTCAAGGACTGCAAAGACTGCCCTAAGGAGCCGAGGGCTATGGGGATATGTTGAA

ID:

scaffold10293|size414_LTR-Copia_55

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

396

Start:

1  

End:

396

Strand:

+

>scaffold10293|size414_LTR-Copia_55

TGCCCATACACACCTCAGCAAAATGGAGTCTCGGAAAGGAAGAATAGACATGTGCTAGAGGTGGCTAGAAGTATGATGTTTGAGAGAGGAGTTCCTAAGAGATTTTGGGGAGATGCGGTGATGGTAGCTTGTTATGTGATCAATAGGCTCCCAACACCAAATCTGGAAAACAAGTCTCCTTATGAGGTCTTGAATGGTAAAACCAAGCATTGATCATCTCCGAGTCTTTGGATGCAGGTGCTACGTGTTTATTCCCGAAGCTCAAAGGAATAAGCTGGAACCTAAGAGCATTAAGTGCGTGTTTGTTGGATACTCAAGCACTCAAAAGGGCTACAAGTGTTATGATCCAGAGACAAAACACATATATGTATCAAGAGAAGTCCGGTTTGATGAAGA

ID:

scaffold10296|size414_LTR-Copia_56

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

92

Start:

312  

End:

403

Strand:

-

>scaffold10296|size414_LTR-Copia_56

GCCTTAGTGAATATATCCGCCATCTGATCTCCACTCTTCACAAACTTGGTCTCAATCAACCCTTCTTGAATCTTTCCTCGAACAAAGTGACA

ID:

scaffold102|size241018_LTR-Copia_57

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

83

Start:

18843  

End:

18925

Strand:

+

>scaffold102|size241018_LTR-Copia_57

TGTACTCTTTTTCCTTATCTTCAGTTTTCCCACTGGGTTTTTCTGAGAAAGGTTTTAACGAGGCAACACCCTTAGTGCGCATT

ID:

scaffold102|size241018_LTR-Copia_58

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

84

Start:

19122  

End:

19205

Strand:

+

>scaffold102|size241018_LTR-Copia_58

TTGTACTCTTTTTCCTTATCTTCAGTTTTCCCACTGGGTTTTTCTGAGAAAGGTTTTAACGAGGCAACACCCTTAGTGCGCATT

ID:

scaffold102|size241018_LTR-Copia_59

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

1205

Start:

22122  

End:

23326

Strand:

+

>scaffold102|size241018_LTR-Copia_59

ATCATGGAGATGCAAAAACAGATTTTGCTACCAGTTGTTCTTAAGGGAAACAACTTTCTATTATGGTCAAGGACCACCATGACAGCTCTAAGGAGCCGTGGGTTATGGAAGTATGTGGAGACAACAGAGGAGGTCGTCGGAGGAGATGCGGCCAAGGCAGCGGGTAAGGCAGTTGATGATGAAGGAGAGGCGGCCAAGAAAGAAAAACAGAAGTGGGAACAAGAGGACCAACACGTTTTGGCCGTTCTACAAAGCTCTCTTGAGCCGTCAATCCTAGCTGCTTACTCTTACAATGAACAGCTAAGGAACTATGGGATACACTTATTGGGGTGTATGGAAACATGTCTAATATCTCAAGAATCTTTGAGGTAAAGAAAGCTTTAAATGATCTTCAACAGGAACATAAGGCGTTTAAAGAACTCTTTGGAGACTTTAGAGGATTGTGGGCAAAGCTGGAGATGCTCAGGCCACAAACTAATGATCCAAAAGAACAGAACGAGAGGAGAGAGCAAGACCAGGTGTTCGGACTGCTGCTTACTCTTAACAACTCCTATAGAGGACTCATACAATATATTCTGAGGTTTGATAAACTACCAGGTTTGAATGAGGTTTGTATGCAGATTCAGAAGGAGGAAGGTTCAAGGAGCCTAATGAACATTGCAAAATGAAAGGGCACACCAAGGAGAAGTGCTGGACGTTATATCCTCATCTAAAACCAATGAGGCTGAGAGGAAACGGACAAGGTCCAAAGAGCTTTGCTGGGACATCCATGGCTAGTGGTGATGAAATGGTGAGGAAGTCAGACCTTGAAGCGCTGATCAAGAGCATTACCAAGCTCTCTGAATCAGGTAAAAGTCTTCTAGCCTTAAAAACGCATAAGGAAATCATAGTTGATTCTGGTGCCTCTGATCATATGATTAAGGATGCGGTTATGTTAAAAGGTATTAGACCACACAATGGTAGTGTTACAATAGCTAATGGAATAACTGTCCCCATAAAAGGAATTGGGAACTTAGAGTTGTTTGAGAAGAGTACTAAGGCTCTTTATGTTCCAGAATTCAGCTCTAATTTGTTGTCTGTTCACAAGGCTACAAAGGATCTAGAGTGTTTGGCTGTGTTTGGTTCTGATTTGATGCAATTTCAGGACACTAAGACCAGGGAAGTAATTGGAGAAGGAGAGGTCAGGAAAGGCCTCTATTTTTTGA

ID:

scaffold102|size241018_LTR-Copia_60

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Copia

Length:

96

Start:

23522  

End:

23617

Strand:

+

>scaffold102|size241018_LTR-Copia_60

AAAACAGATTTTGCTACCAGTTGTTCTTAAGGGAAACAACTTTCTATTATGGTCAAGGACCACCAAGACAGCTCTAAGGAGCCGTGGGTTATGGAA