Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_41Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
717Start:
4527033End:
4527749Strand:
+>B1_LTR-Gypsy_41
CTTGACGAACAAACGGCGAATGAGTTAGCTGCGCTGAAACAGTCAGTCCTCGACATCAACTCTGAATCCACCATGTGGCGACTTCCGCACCCCAAATCGAAGCGGCGTCCTCGCCGACTCCCTCCGCGCCGTTTACCGACAAAATAACCAAGGTCCAGCTCAAAAACAGAGAAACTTCGCCTCCCAAAGTTCGACGGAGTTTCGGACCCGTCAATCCACGTCACATCCTTTAACATCGCGATGCGTCGCGCGAATTTCTCGGACGAAGAAAAGGGCGCCGGCTCTGTCGTACCGTGGAATCCCTAGAAGGACCAGCCCTCACTTGGTTCACTGGTCTCGAGAGAACAACCGCTTCGCGACCTCTCAGCGTCTTCCTCAAGCAGTTTATCTTGTTCTCCCAACAAAGACTACGGCTTCACCTATGGAATCTCACCCATGCGAGCGGTCAAAGCTGCGCGATTTCATGGAGAAATTCAAGGCCGTCGTATCAAAGGCCGACATCGGACAATATTGCGGTTGAAGCATTGATGAGCACCACACGCCAAGTCGAAATTTGAGAGGCCCTACGAAAACCCGACTAAATCCCTTCCGGATGCCATCGCTCGAACAACTTCATCCGTATGGAGGAGGACACTCGAGCCAAGTTGGCAAAGGAAGCGCGATAAAGCGAGGACATAACCGGACCAACGACGCGAGACCGGAACCCCGCCAACATTC
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_42Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
122Start:
4528186End:
4528307Strand:
+>B1_LTR-Gypsy_42
GGCGACTCATCCGAAGACGATCAACCTAAGAATAGACGACGGGTCGAGGTGATACTCTCTCACCCTAAGAGAGGCTCTTCTGATGATTCCTCAGACGACGAAGACCCCACACAAGAGCGCGA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_43Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
4112Start:
4528703End:
4532814Strand:
+>B1_LTR-Gypsy_43
CGTTATCATGGGAGGACTCCGCCGGCGGCGACTTCGGTTCGGGCCGTCGAAGAAGTATCGTCGTCAAGCAATTACGAGCAAAATGGCCCTCGCCAGAAGATGCCCCGGATCACATTCTCACCTTCCGATACTCGTGGGGTCCAAACACCGCACAACGACCCTCTCCTCGTCGATATCGGCATAGGCGAATGTCAAGTCACCAAAGTGTTGATCGACACCGGTAGTTCCGTCGATCTCATCTTCCGCGACACACTCGACAAGATGGGTGTCGACCTACGCGATATGAAACCCTCTTCTCGAACCTTAACCGGTTTCAACGGCGCTTCAGAGCAAATGATCGGCACAATAAAACTCCCGGTTCACGCCGGAGATGTGACGAGAACCGTGAAGTTCTCGGTCGTGCGAGCCAAGGCGCCATACAACGCTATCCTGGGTACCCCGTGGCTGCACTCAATGAAAGCCATCCCATCTACTTACCCCCAATGTGTCAAGTTCCCGGGGCGTGACGGCTCGATCAAAACAATTCGTGGTGATCAAAAGGCCGCGAGGGAACTGCTGGTCGCAACGATTAAGCAGCAGCAATCCCTCTCCCTCGTAAACTCGGTGGCCAAGCATGTACAGAAGATCTACCCACAAAAGGAAGAGATCCGTGAAGTCGCCATCGATGACAACGATCCGACAAAGCTTCGCCGAATCGGTAGCGATATCTTTCCAGCGAAATGCAGCGGAAGCTCGTAACCTTCCTTAAGGAAAAGCGCATCAGTTTTAAGCGGACCACGCCGGACATGAAAGGGATTGATCCAGCGATAGCCTCCCACGAGCTAAACGTCGACCCGACATTCAAGCCTATCCGGCAAAAGCGACGGAAGCTTCGGCCTGGCGATCGAGCGGTCAACGCGAAGTCGACCGCTGCCGACGCAGGCTTCATCACCGAGGTTCGATACCCGAATGGCTCGCCAACCCGTGGTAGTCAAGAAGAAGAATGGCAAATGGCGGATCTGTATGCGACTTCACGGATTTGAACAAAGCATGTCCGAAAGATAGTTATCCGCTCCCTCATATAGACCGCCTGGTGGAGTCAACCGCCGGAAACGAACTCCTCACCTTCATGGACGCATTCTCGGGATACAACCAGATCCTCATGCACCACGGCGATAGCGAAAAGCGGCCTTCATCACGGAACCGCGGAACTTACTGCTATAAAGTAATGCCGCTTCGGGCTAAAGAACGCGGCGCCACATACCAGGCGACTTCGTGAATCGCATGTTCGCAGATAAACTTGGCGACACGATGGAGGTATATATCGACGACATGCTTGTCAAGTCACTCCGCGCTGAGGATCATCTCCTCCACTTGCAAGACTGTTTTCAGATCCTTAACAAATTCGGCATGAAGCTCAACCCTGCCAAATGTACCTTCGGAGTTACTTCGGGTGAATTCTTAGGCTACATCGTCACCCAGCGGTATCGGCGAACCCCAAACAAATTACAGCAATCCTCGACCTACCAAGTCCGAAGAACAGCAGAGAGGTCCAACGGCTAACCGGCCGAATCGCCGCCCTCAACAGATTCATTTCACGCTCCACAGATCGATGCCTCCCATTTTACGAACTACTGCGAGGAAACAAGCGGTTCATTTGGGACGATAAGTGCGAAGAAGCATTCAATCAAGCTGAAGCACTACCTTACAACGCCCCGGTTCTCTCAAAGCCGAAGCGGCGATACCCTAACCACGTACATCGCGTAACATCAACCGCCGTCAGCAGCGTTCTGATCCGAGAAGACCGCGGCGAGCAAAAACCAATCTTTTACACTAGCAAACGAATGACGGCCCCGGAAACACGATATCCAACCCTAGAGAAGATGGCCCTCGCGGTGACTTCAGCTTCGGAAACTTCGACCGTACTTTCAGTCGCGCACACCATCGGTTTTATCCAACCAACCACCGGACGGTGATGCAAAACACAAACCAGTCCGCGACCAAATGGGCAATGTAGCTCAGCGAGCATGACATCATTTACAAAAACCGAACGGCCGCCAAGTCCCAAGTCCTCGCCGACTTCATCATTGAGTTAACGCCCGAACTGGAGCAAGACCTCATTCTACCCAGCCTTAACTGGATATTGCCGCCGGCGGATCGTCGGCGAATAAGGGTTCCGGTGCGGCGTCCCAACTTCAATCCCCACAGGCGAACTTATCAGGCAGCCATTCAGTTTCGGTTTCCCGCCTCAACAACGGCGAATACGAATCTTTGATCGCCGGGCTGCGCCTCGCTAAAGCTGTCAACGCCAAACGATTGAACGCCTACTGCGACTTCGCAACTTCGTCGTCAGCCGATTTCGAGAGATTATGATGTCCGCAGCGAACGCATGGACGCCTACCTCAACGTCGTCCAAGACTTGTCACGAGAGTTTGAATTCTTCGAACTAACAAAAGTTCCCCGCGGTGAAGCGCTGTGCTGGCGCGACTGGCGCTCTAGGAAGCAAACTGCGCACGGGTCGGCGGACGATCCCAATCCACGGGATTGAAGTCCCTAGCATCACCACCTATCGACCCATGCAACAGCACCAACCCAGTGACCTCGATCACAACAACCACCAACAAAGAAAGCGCGCAGCGAATGGAAGAGAGTCCACCCGACTGGCGACAGGAGTTCATCGATTTCCTAGCCAACGGCAAACTCCCGGTCGAAAAGTGGGCACGCCGCCTCAAGCGACGCGCACGCGTACGTTTTCACCGAGGGAGAACTACGTCGATGGACGGCAACCAAAGTTCTCCTAAAGTGCATCGCCGGCGACGAAACAAGACTTGTCATGGCCGAAACCCATGAAGGCGCCGCGGGCAATCATTCTGGGGGACGAGCCCTCGCTTTAAAAATCAAGCAGCTCGGGTTCTATTGGCCAACCATGAATACAGACTGCGAGGCATACGCTCGCAAATGCGACAAGTGCCAACGTCACGCTTCGACGATCCACAGTCCAACCGAGCTATTGCATACGTTAAACACACCTTACCCATTCATGCGGTGGGGCATGGATATCATCGGGCCATTGCCCAGCTCTAGGCAAAAGAAGTACATCTTAGTCCTTACCGACTACTTCACTAAGTGGGTTGGGAGTCTTACGCGAATCAGCGACAACGAGGTACATCGGTTAGATGCGGAAAAACATCATCTGCAGGCACGGGCTCCCGTACGAGATAGTCACCGATAACGGATCGCAGTTCATCTCCCGCAAATTCCGCGACTTCTGCGAGAGGTGGAAAATTCGCCTCAACATGTCGACCCCGCGAAACCCGCAAAGCAGCGGTCAAGCGAGTCAGCGAACAAGGTAATTATTGGCGGCCTCGAAAAGACTTGACCTCAAAAGGTTCTGGGCGGCGAACTTCGATGGCGTCTTGTGGTCCCACCGAACCACTCCCCGCAGCGCAACCAAATCGACTCCCTTCTCAATGGCCTACGGGATCGAGGCAATGGCACTGCCGAGTAAGCGTCCACCAGTCTGCGGCAGCCAAAATGCCCATGCGAGGAAATGAACCGAAACATGCTCCTCGACGCCTTGGACAGCATCGAGGAACAACCAAGCACGCCCGCATCTGAACTACCAACATCGATTGAGCGCTACTACAACAAAAGGTCAAGTCCCGACCTTTCCAATCGAGATCAAGTACTGCGAAAAGTGTTCGAAAATACCAAGGAATGGGGTGCCGGTAAGCTCGGAGCAAACTGGGAGGGGCCGTACAAAATAACTGAGATAATCAAGCCCGGCGTCTATCGTCTAGAGACATCAACCGGAGAAGCGGTCCCGCGCGCATGGAATTCAAAACACCTCCAGCTTTTCTGTTCCTAGGCGCAGCCCACACAACAAGTGACCGATCACTCGCCACTCTTCCTACAAAAAAACCCCGAGTGAATGCACAACCCCAGCCACTTTCACTCGGGCCCCAAGAACTCTGGCGACTTGATCCTCTCCCAGTGCGTAGGCAGCTCTTACGGCCACACACATCCGAGTGAATGCGCAACCCCAGCCACTTTCACTCGGGCCCCAAGAACTACGAACAACTTGATCCTCTCCCGAGGTACGTAGGCAGCTCTTATGAAGCACAGTCACAACA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_44Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
89Start:
4532816End:
4532904Strand:
+>B1_LTR-Gypsy_44
CCGAGTGAATGCGCAACCCCAGCCACTTTCACTCGGGCCCCAAGAACTACGAGCGACTTGATCCTCTCGAGGTGCGTAGGCAGCTCTTA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_45Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
325Start:
4532924End:
4533248Strand:
+>B1_LTR-Gypsy_45
GTGAATGCGCAACCCCAGCCACTTTCACTCGGGCCCCAAGAACTACGAACGACTTGATCCTCTCCCGAGGTACGTAGGCAGCTCTCGCGAGTGCAGTTACGAAGCAAAATAAAACCAAAACTTTTCATTTAACGCGTCGATGCTACGGCAAGAACCTTCGGTTCCTCAAAACTGCGTGATGGTACTCACGACCCACTGCCGAGCATGTCCTGATCAGACACAACTCGCTGGGATCCGACCTCGCCAGCAGCAGGTGGCGCAATTGATAACTCTGTCTCTTTCCAAATTCACTAAGTAAGGTTTGGCCGACCGAACACTTAGGAAT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_46Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1011Start:
4539109End:
4540119Strand:
+>B1_LTR-Gypsy_46
TCGATAAACTCAGTATTCGACCCGAACTGATCCAAACTGGTCATCACTTGCTTGTCGACGAACTGCGAGTCGAGTACCAGAGGAGAAAGGGACAGGTCGCTCTCAGGAATCTCTCCAACATCGAGATTGGCCGCTTCGGCTTCGAGCTCTACCTCCTGGGCGGCGAACAAATCTATCGATTCCTGCGGAATGTCGCGACCCGCGGCCTTCAGGGCTTCAAGACATTTCCGCGTCCCATACGCCTGACTCCACAGCAGTTTGGCCGTCTCAAGATCGGACTGACGAGCCTGATGGGCGCGAATGTTGGTGAACCGCCTGTTGCACTTCGCAATCATCTCTGCTTCGACCCTGACCCTTTCCCTCGTAACCTCGAAGACACGAGATTTCCGGAGGCGGCTAGCTTCCTTCTTCGAATGATCGGCACTCCTGCCCAGCTTCTCCTCCGCCGCCCCTAATCGCGACTCAAGGACCGAGATAGTCGAGCGAGCATCCGCAAGCTCTGCTTCGGCTGCGACAGCTCGCTTCAATTGAACGTTCCTTCGCTCGATAGCTCGTTCCCTTTTCTCGGCCATCTCTTTGTAAGAACTCTCCCACTCGGCCTTCTTTCGGCGGAGGAGTCGGGACTTCGCGGCCAATTTCTTCTCCAAAGCCTCCGAGTTAGCATACGACTCCTTCAACGCCGTGTCGTATCTCTCAACGACAGCATTCATATCCCCGTCGCTCTGTCAAAAGCACAAGTAAAGCTTTAACAAGAAAATGAGAAAGCGAGAATCGGTAGGAGCGGAGCAATCCTTACCAAAAATCGGGTCCTCGCCGCATTGGCATATTCATCCCGAAATATCAGGTCGTCCCACAAAGGAAGGGATGTCGGGGCACTTCTGATTTGACTCATCAGCTCTGCGCACCGCCCCGGAGCATAAATGAGCGGCATCGGCTCGTCATAGCTAAACGAGACATGGTCGGGAAAGATTACCCGACGCACTTTCCTCATGACCGGAGTACCGTCGGGCG
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_47Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1569Start:
4540642End:
4542210Strand:
+>B1_LTR-Gypsy_47
ACCGAGTTGCGGGGCAAGCATCGCACTAAGATCGGGCAGCCCCTTCATCTTTCTACGCTCAGTGATCCTTCGTTGCTCTTCCCCGGAAAATAATGAGATACGTCGCTTCGTAGTGTTCACCGAAGGAAGGTAGCTCGAGTTCCAATCCCCTGCAAGAAAGACATCGTCGATAGTCAGTTACCGCTAGCTGACCAAGTCTCGACAAAGTGCACAAAATAAAGAACAGGCTCACGTCTGGAAATACGATCGAGACACCGCCGGATCCTCTCCCTCGAAATGTTTCCCCAACGCTCTTGGTCGAGCCTCGCGATAGCACGAGAATTCTCTAGAAACTCTTCGGGATATTCGCGAGATGTCGGATGGTCAGCTACAAAAAAAAAAAGAGAACAAATCAACGTTAAAAGACGATCACTCGTTACAGCAAGACTTAGATGATCTACCAAGCAAGGCATTCCACAAGACGCGATAGTCGTCGCCCGGGAGGTCCTCGAAAGAGAAGTCGTCCGACTTGACGAAGAAGTAAGATCTCTGCCAGTCGGGCGTCTTGTTCGGATTCCCTCCCACGACGTTATAGTTTGGCCGCGCCTTAATCGACCATAGACCCTCATCTTGCGGGCTGATAGACGTAAGTTCTTCAAAGACACGAACACTCATGGTAATGTCGTTTTCGGCAGCCAGAACCATCAAGGTCACCGCGAGTCGCCACGAACCATTCAAGAATTGGCAAATAGCCGAGTCGCGACGTCTCGCATACGAGGTGACGAGTCGGGGTATCGGAAACTAGAGCTTCGTGTCCTCGCGGAAATATGACTCATACACGCACTGATAGCCGACTGGTGGAGACCACGGCCGCTGATCCTCCGTCGGGATAAGGAACGTCACCCCGACACCTCCAATCGCCCTTAATAACCTCTTCACACTGGCCACGGTAGACTGTGTTTTCAGAACGTTCCCCCAGGTTTGCCCTCTCGCGTCGGGAGAACGGAGAAGCTCAGGTGCGATATCTGGGAGTTCTTCAAAAATTCCGCCGGGATAGTATACAATTGGAACGGCCTCAGCAGAGGAGGCGCCGCTCCTCGCGCCACTCTGGCTATCCCGCGCGCAATCTCGGGCCCTAGTTCCGGCTCTTTCCGACTCCTCTCGGTGCAGACGCGCAGAGTCGGAGACCAGTAGCCGCTGCGACAAATCCAAGGATCGAGTATCCATCATGGCATCGCGATGAGTTAGCTCGAAATCGTCGAGCAAGCTCCCATCTGCATCTCTCGCCGGGCTAGAAGAATCTGACGTCATCCTTCTCTTTTCTGAATCGTACAACAAAACCCTACCGAGCGACGCACCGCACACTATCGTACAACAAACTAGAGAGAGAAGTAGAGAAGAGAGAGAAACTACCTGCAGGCCAAAGGAAGAATGGAAAAGTGAGGAGGAGGAAGGACTATTTATAAGGAAGAGAGACGGTTCGCCTCCCCGAGGCGTCATCATTGCGCCTACGTGGGCCTATTTGGGCCTCAAAGCCGGTGCCAAACTAACCCACTAGCTCGGTACGACGCTTCAGCTCCCGAGATAACC
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_48Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
143Start:
4542602End:
4542744Strand:
+>B1_LTR-Gypsy_48
CGGCCCTACGAGCCGAAAGCCCACGAACATGGAGACAATTAGGTCACGGGAAAACGAGGAGGGCGAGTATAAAAAGAGAGGACATAGCAACGTAGAAGGGATCCAGAAATCATTGCATTCACCAGACGGCTAGATTAGGGTTT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_49Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
489Start:
4747655End:
4748143Strand:
+>B1_LTR-Gypsy_49
TTCCTGAATTTTCTGGCGAACAATCGGCCGAGGAACTTCTGGATTGGATCGTCACGGTGGAAGAGACTCTCGAGTTCAAACGCGTGTCTCTGGAGCGATGTGTTCCCATGATCGCCATGCGGTTCCGTGGCTCAGCAGCAGCTTGGTGGTCGCAAAAAAAGTCGTCACGTGCACGTGAGGGAAAACCTAGAATCTTGTCGTGGGATAAGTTGAAGAAAAAGATGCGTAAGGCGTTTCTACCATTCAACTACGACCAAGTCACGTTCCAATGCTTTCACGGGTTGCAACAGGAAAGGCGATCAGTGGAAGAATACTCCACCGAGTTTATTTCGCTTTTGAGGCGTGTTGATGTGCAGTATACGGACCAACAGATTGTGGAGTGTTTCGTTGGCGGTTTGCAGCACCAGAAGATGAAAGACAATCTTAACTTGTTGAACCCTCTCACTCTGCCTGAAGCACATCAAAAGGCACTCATCATGGAAGCTCAAA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_50Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1291Start:
4956513End:
4957803Strand:
+>B1_LTR-Gypsy_50
TGATATCCTGCATATTTTCACTGTTTTACCTTATTATCCATGTGCATCTTGATCATTTAGACTAGGATTTAGCCATGCCTAGGTTGCATTTTGCATACATAAGTCCTTATCAGGTATTGGAGTACTACATGAAGTTCTTAGAGATATTTGGGTGCATTTGTGGCTCAAAAGAAATGATAAAAATGATCAAGAGACGAGCAGCCCCAGAGTGACCTCCCGGAGTGACCCTTCCTGGTCACTCGTCTGCCAACACCATCCTGGAGTGACGTGACCTACTCCAGTGACCCTTCCTGGTCACTCGCCTGCCGATGCCATCCTGGAGTGACCTCCTGGAGTGACTCTGCCTGGTCACTCCGTGTTCCGTTTCAGCTCAAAACTTAACATTAATCAGGGGCATTTTGGTCATTTGTTATGCACGTTTTACTCTTCTAAAACCTAAGTTTAAGTACTTTGTAAACCATGAGGAGGCTAATCTATCTTTTACACTAAAAAAACATCAAAAACCTATTGAAAGAGTTCATCTTTTGGATCATTGATTCTTGTGTTCTTACTGTTTTTGTTGATTGCTTATTATTATCTCTTTCATGATTAACCTGAAATCCAATATGGGTTTAAGGGGAATCATGAGTATTAGTGAGTGATCACCATTTGAATTCATGGGGTAGGAAGATTGAGGGTGATTAGGCTAGATCTAGGATGTTTAGGTGTAGATCATTCTTAGTCCTTGCTAGTAGAGTATCCATAATGCATCTTCTGAGTTGGCCACTCAAAAATTGATCATTAGGTATTTCCCACCCACAAGGTGTTCTATGAAATGCCTGATACAACTCTCCTAAGCTTTTAACATACTTTACCAAAGATATTTGTTGTTAAAGGTGTTAAGATAGCCAATAGACTTGTTGGTAGTGATTGCTTTCATATTATTCAACCAAAGACATTTGATGTTTGAAATGTGTTAGCAAATGAGCATTCATCTAGACATAGAGCTTGCTTAGAAATGTGTCTAGGCTTAAGGTTGATAGTTTGATTGATCATTTGGCATCTTTAGTTCAAAACTTGATCACCCAAGGTCTAATCCCTATACCCATGAGTTCTCTTTTCCTATAGTCAAGAAAGTTATTTCTTTTATTGCATTCTATTATTAGTAGTAGTTTAAAACCATCCAAATTATCGGTTGCACTTAGATTAAGTAAGTACTTGCATTCTTGGTGCTTTGAATCCCTCAGAACTGGTTCGACATTCACTCATACTACAACATTTTCTTTAGGAGCCTTGAAAACTCCTAACATCA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_51Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
320Start:
4957805End:
4958124Strand:
+>B1_LTR-Gypsy_51
ATTGGCGCCGTTGCCAAATTCTGAGTAGATTTAAACATTGAGATTTAGTCACTTGCTTGAGACTAAGTCGTTTTTTTTCTTTTATCTTGTTACTAATTCTCCATCTTCATCTCCCTTGGCATTTCAGGTGTATGAACTTGAGGAGTAGAGGCACAACAAACCTTGTTCCAAGAATTGAAGACATTAGAGCATTTGAAAGGGAAACTAGAAGAAGGAGACAAGCAGAAAAGCAACAGGCTCACTTGCAGAGATTGGATACAGACATGAAAAACTTACCACAAGGTGGAAATGTGAACGGTCAAGGTGCTGACGACCCTCCA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_52Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1042Start:
4958134End:
4959175Strand:
+>B1_LTR-Gypsy_52
CCACAACACCCACAGAGACCAGCTCGAGCCATTGGAACCTATGACCGCCCTAACATTCATGGGCATATGTTAGGAATCATAGCACCAGCTGTGGAAGCCAACAACTTTGAAGTCAAACCAGGACTCCTCAACGTGATCGAGAACAACAAGTATCATGGCGTGGCTGTAGAGGATCCATTTGATCACTTGGACAAGTTTGACAGTTACTATGGGTTGTCAAAAACCAACGGTGTGTCTGAGGATGCTTTCAAGCTCAAGCTATTCCCTTTCTCTTTGGGGGATAAGGGCGTCAGTGGGAGAAGTCTTTGCCCAGCGACTCTATCACCACCTGGAATGATTGCAAAAGAGCATTTTTGGAAAAGTTCTTCTCTACCCTAAGAACTGCAAAGTTGAGAAATGAGATTTCAAGTTTTCAACAGAAGAACTTGGAAGGATTCAGTGAAGCTTGGGAGAGATTCAAGAGCTATCAAGCTCAATGCCCACACCATGGTTTTTCCAAGGAAAGCTTGCTGAGCACATTCTACAGAGGGGCTCTTCCTAAGTACAGAGCCAGGTTGGATACTGCAAGTAATGGGTTCTTCTTAGGAAGAACTGAGGAAGATGCATAAGAGCTAGTTGATAACATGGTGAAAAGTGACGCAGTCTACAGTGGAGACTACGACAAAAGCGTTAGAACTGATAATAAACAAACAAGGAAGAAGCTGAAGGCTCTGCAGGAGAAGATAGACATAATCATTGCTGATAAAGCAACACAAGAGCAGCTGAACTTTGTTGGAAACAAAAACCAAGAGGCACCACCTGCAGTTAATGAGGTTGATGGGCTGGAAGGACAAGAAGAGCTGTGTTTCATCAACAACAATGGTAGTTGGTACAGGAAAGAGCCTAATTTCCAGTACAACAACTACCCACAGAGATCTATCCCAGCAACCAACAAGGAGGCTACCAGCCAAAGAGCAACTACAACCAGCAGAGTGGTAACCAGCCTAGGAACAATCAGCAAGGAAACTATCAGCCTCAGCAGAACCCTCCTCCTGGTTTCCCT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_53Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
2102Start:
4959221End:
4961322Strand:
+>B1_LTR-Gypsy_53
TCTGCTCCTCAAGAGAGCATCACTGATACCTTACTGAAACAAATCTTGGAGTCTCAGACTAGAAGTGAGAAGCATGTTGGTTATGAGTTGAAGAACCTTCATTCCAAGATTGATGGGAGCTACACTGATCTGAACAACAAATTCTCACACCTTTCTTCTACAGTCAGAATTTAGATAATCAGTTTGCTTCCATGAACACTCACCAGAATCGCCAGCAAGGGTCTCTACCTGGAAACTGACCAAAACCCCAAAGAGACCATGAAAGCTATTACACTCAGGAGTGGTAAGAAATTACCACCTTGCTCAAACCAAGGATGCTGAGAAACAAGGTGGGGAGGTAGCTATCAACATAGATGATGAAGTGGTAATTATTGATGAGAAGATCAATGATGAAATCTTGGAGAAGATTGTGGAAGCAAAAGGTAAAGGAAAGGCTGGAGAGAAGAAGAAAACAGTGAAAGATGGTGAATTTGTTACTCCAGCAAATGATAATTCTTCCGCTCCCCCTTCCTATGAACCCAAACTTCCATTCTCTGGTAGATTCAAGAAGCAGCTGCTAGAGAAGTACAAGGCATTGTTTGAGAAGCAAATGAGTGAAGCTCAGGTCGCGATGCCCATCATTGATGCTTTCATGATGATTCCTCAATACAGCAAGTACCTGAAAGATGCTGTGGCAGCAAAGAAGAAGGAGATGGAAAGCATGATGATCCTTACCCATGAGTGCAGTGCCATCATCCAAAGGCTTGATGTTCCAGAGAAGCTAGAGGATCCAGGATGCTTCACACTACCTTGTGCTCTTGGACCTATGATATTTGAGAAAGTCTATGCGATTTGGGAGCTAGTGTCAGCTTGATGCCTTTATATATTGCAAAGAAGCTTGGATTCAATCAGTACAAGAAGTGTAGACTCTCTCTGGTGTTGGCTGATCGTTCAGTGAAGTACCCTGTGGGCATCTTAGAGGACCTCCCTGTGAAGATTGGAAGTTATGAGATACCTACAGACTTCGTCGTGCTTGAGATGGGTGAGGAGGCTAAAGACCCATTGATCCTAGGAAGGCCATTCTTAGCAACAGCAGGAGCTATTGTTAATGTGAAGGAAGGCAAGATTGACCTCCATTTGGGTCAAGAGAACATCATCCACTTTGACATCAAGGAGAAAATGAGGAAACCAACTGTGTTCGGGCAAGCCTTCCATATTGAAGAGATGGACACACCTGCTGATGAGCACCTTGAAGAGTTACCACCTGAGGACGGCGATGAGGGGGCATCTGCCTCCACTAACTTCCCATAGAAGGTACTCCACCTTTCCCTTGTATATATTAGCTTCAATTGCATTCTAGTTTTTCTTTTCGGTAGCTCTCTCATCTTAAACAACACAGAGACTGTGTGGCTTAAGTTTGGGGGAGTTAACCAAGTATTTGATCATGTTTGCTTTGATGTTTTTGCATTGATTCTTGCATTTCATATAAAAAAAAAATTCATCATTTAGTTTGCATCACTTACATTGATAGGAGAGTCTAGAGCATATAAGTTTCATTCACTTGCATTGGGAGCAATGATTTAAAATGCCTTGTAAAGAACACCACCTTGCACCTGAGTAGTTTATGCACCCCTCTAAAAGACTTGTATGCTTCGAGCCTTGAAAACTCCTCCTGAAACTCATTGATTGCTGAAACTCAGTCTTTGAAGCCAACTACAATCTTAATTGAACTGAATGAACTTAATGCATCTTGCTCATGGTCTCTTGTGTACTGAATTATGGCTATACACACTTGAGTTGTCACATCTTTTATGCCAATCTCTTTGACAACCTCTAGTGGTAGACCACTCCCAAAACCCTTTACTCCTTTTAAGCTTTCATTGATTGATGAGTGAGGCCTTTTTCGGAAAGTCTTACATGCACATAATGTTGAGAGTATTGGGAACGACAATGCTTGGTCTTCATTCTTGCTATATTAGACACACTATTGTCTAGCCATAGGATGGGGGTGAGTGTTGTAAATTTTGATTTGGGAAAATGGAAAAAGTTGAAGGAAAAAAATGAACTCTTTGTGCTTAATTGACTAGACTTTATGGGATAAGTAGAGAAACCTTTAGCTCAAG
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_54Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
628Start:
4961396End:
4962023Strand:
+>B1_LTR-Gypsy_54
AAGGGGGCTAGCAAAGTTAGTAAGAGCTAAGGGGTCATAAAATTTGGTAAATCCCTTGTTGAATAAAGAGTTTTGTGTTGAGAAATGTTCTTGAGTTCCTTGGGTGAGAGATGTGAGTTGGGGTTTAGTATTGAGAAATGAATGTGTAACATGTATGTTTGGGAAAATGGTAGAACAATGGAGACTGACCATTGTATGCATAAGTTGATTCCTTTCTTAGATATATTATGTGCAATGTCAAGGCTACTTGTCTTGAGAGTATACCCCTTTGAAAATCACATGTCTTGAAACTCTTGACTCACTTGAATAAAAAGCCTTCCTTTACCTAAATGATTTGGACCAGTTGACCATTTGCAAGAACTCACTTGTTGTTGTGCTTAATGAACGTGAGAGTTGGCTGATTTGATTGTGTGAATGCATGATGGTGAGTGTAGGGGCAAAAAGAGCTAAGATAGGTCTAGAGAAGCTAGAGTATAATAAGAGAGAGTGTGCTCAAGTTTTAATTCAAATGTTGAATCAAGTGCTGTGTGTTTTTCTTTTGGCTATGAGCTCCCGCCTTCAAACCTCTTTCCATATGAGTTCTAGAAAGTTCACTTGTGGACAAGTAAAAGAACAAGTTTGGGGGAGT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_55Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
1285Start:
4962024End:
4963308Strand:
+>B1_LTR-Gypsy_55
TGATATCCTGCATATTTCCACTGTTTTACCTTATCATCCATGTGCATCTTGATCATTTAGACTAGGATTTAGCCATGCCTAGGTTGCATTTTGCATACATAAGTCCTTATCATGTATTGGAGTACCACATGAAGTTCTTGGAGACATTTGGGTGCAGTTGTGGCTCAAAAGAAGTGATAAAAGTGATCAAGAGACGAGCAGCCCCAGAGTGACCTCCCGGAGTGACCCTTCCTGGTCACTCGCCTGCCAACACCATCCTGGAGTGACCTACCCCAGTGACCCCTCCTGGTCACTCGCCTGCCGATGCCATCCTGGAGTGACCTCCTGGAGTGACCCTGCCTGGTCACTCCGTGTTCCGTTTCAGCTCAAAACTTAGCATTAATCAGGGGCATTTTGGTCATTTGCTATGCACGTTTTACTCTTCTAAAACCTAAGTTTAAGTACTTTGTAAGCCATGAGGAGGCTAATCTATCTTTTACACTAAAAAAACATCAAAAACCTATTGAAAGAGTTCATCTTTTGGATCATTGATTCTTGTGTTCTTACTGTTTTTGTTGATTGCTTATTATTATCTCTTTCATGATTAACATGAAATCCAATATGGGTTTAAGGGGAATCATGAGTATTAGTGAGTGATCACCATTTGAATTCATGGGGTAGAAAGATTGAGGGTGATTAGGCTAGATCTAGTATGTTTAGGTGTAGATCATTCTTAGTCCTTGCTAGTAGAGTATCCATAATGCATCTTCTGAGTTGGCCACTCAAAAGTTGATCTTTAGGCATTTCCCACTCACAAGGTGTTCTATGAAATGCCTGATACAACTCTCCTAAGCTTTTAACATACTTTACCAAAGACATTTGTTGTTAAAGGTGTTAAGATAGCCAATAGACTTGTTGGTAATGATTGCTTTCATATTATTCAACCAAAGACATTTGATGTTTGAAATGTGTTAGCAAATGAGCATTCATCTAGACATAGAGCTTGCTTAGAAATGTGTCTAGGCTTAAGGTTGATAGTTTGATTGATCATTTGCCATCTTTAGTTCGAAACTTGATCACCCAAGGTCTAATCCCTATACCCATGAGTTCTCTTTTCCTACAGTCAAGAAAGTTATTTTTTTATTGCATTCTATTATTAGTAGTAGTTTAAAACCATCCAAATTATCGGTTGCACTTAGATTAAGTAAGTACTTGCATTCTTGATGCTTTGAATCTCTCAGAACTGGTTTGACATTCACTCATACTACAACATTTGCTTTAGGAGCCTTGAAAACTCCTAACATCA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_56Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
269Start:
5079170End:
5079438Strand:
->B1_LTR-Gypsy_56
AGGAACTGATGTTCATAAAACAACGGTTCCACTCACACAATCGAAGATATCGCAATAGAATCAACCTTCAAATTGATATGAGAATCACAAGTTTACAGAGTTCTAGAGAGAGAAAGTTCTTTACACAATTTTCTGAATGATCTGAAAGAAAGATTGAAAAACAGAGTTTATACGAGTTTGTTAGCATCGTAACAAACTCTTATTCGCCACCGTACACGTGTCAACATCTTCTTCCCCTTCTTTATTCGAATCTTCCCTCCATTCTTCTT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_57Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
4547Start:
5079483End:
5084029Strand:
->B1_LTR-Gypsy_57
ATCCTTCCCCTCCAAACAACCTTGACCTCAAGGTTTAAAATGAGGAAACTTCTTCTCAATGTCAAACAAATACTCCCAAGTTGCTTCTGCAATCGTTTCATTCGTCCACTTGATCAACACCATTGTTGCTGCACGGCCTTGGCGTTGAACCATCTTGCGTTCCAGAACTGACTCAGGTTCTTTCAACAAAACATCATAGTTCATGCGAGGTAGTTCAGTAGCCACTTGCATATTTCCCACAAGCTCTTTCAGTTGTGAAACATGAAACACCGGGTGGATTAAAGAGGATGTAGGTAACTCAAGCTTGTAAGCTACTTTTCCACATCTGTCGAGAATTTTATACGGACCAAAGTACTTCGGTGCTAACTTCTGATTTCCCCTTATCACCAAAGACTTCTGACGATATGGTTGTAACTTCACGAATACGTAATCCCCAATCTCAAAATTTCTATCAGACCGATGGAGATCAGCATTCTGTTGCATCCTGTGCTGCGCCCGCATTAGATGAAACTTGAGAATCAGAATCATGTTCTCTCGTTCCTGTAAAGTTTTAGCCACCACTGCTACCTTCGATTCACCAGGCAAATAAGGTAGATGGACAGGAGGAGGCTGACCATATACTGCTTCAAACGGAGTAAGTTGCGTTGATGTGTGAAAGTTCGTGTTGTACCAGAATTCAGCCAGAGGAATCCATTTAGACCACAGATGCGGTCTATCACTGCACATGCATCTCAAATAAGTTTCCAGACATCTGTTCACAACTTCTGTTTGACCGTCACTCTGAGGGTGATACGCCGAAGAGAAATTTAAACCCACTCCTTGTAATGTGAATAACTCTTTCCAGAACTCGCTGAGAAAGACAGCATCACGGTCACTAACAATGGTTCTCGGAAGACCATGTAACTTGAAGATGTTGTCTAAGAACGCTTGAGCTACCGACAAAGCAGTATAAGGATGTGAGAGACATAAGAAGTGAGCTGCCTTAGAGAGTCGATCTACGACCACCAGAATTACAGATTTCCCAAAAGACAATGGGAGTCCCTCAATGAAATCCATAGAGATGTCTGTCCAAATGCTGTCAGGTATGGGTAAGGGTTGTATCAGACCTGGGGAAGCTGCATTATCGTATTTGCAGGTCTGACAAACTCCACATTGCCTGATATAAGCATGAATCTCTTTTGATAATCCTTTCCAATAAAACAATCCCTTCACTCTCTGCAACGTAGCATCTCGTCCTGAATGACCCCCAACTCCAGAGTTATGAAGCCATTGTAAAATCTTATTCCTTAGCTCGGGTATTGCAGGAACAACAATCTTACTTTTCCTTCTCAAAACGTTCTGCACCCATGAATAAAACTTCTTTCCCTTCGGGTTACTCTTCAGCTTTTCAATTATCTGTTTCACCACCAAATCAGTTTCATAACCCTCTTGTATTTCCTTCATAAGATCACACTCAAGTACGGACATCGCCATGTGTAAAACCTCTGATCCTTCCACCCTAGACAGAGCATCTGCAGCGACATTTTCTTTACCCTGGCGGTATTGAATTTCATAATCGAACTCAAGCAACTTCGGTAGCCATTGTTGCTGTATAGGGGTGTTTAACCTTTGCTCCAATAGATATTTAAGACTCTTCTGATCCGTCTTAATCACAAAATGTCGGGAGAGCAAATAATGCCGCCATTTCTGTACTGCAAACACTACCGCCAGAAGCTCTTTTTCGTATATAGAAAGATGAAGTTGTTTTCCCTTCAAGTGTCTACTTATGTAAGCTAGAGGGTGACCTTCTTGCATAAGAACAGCGCCAATCCCACTACCACTTGCATCAGTTTCTACCACGAATGTCTTATCAAACTGAGGTAAAGCTAAGACTGGAGCATGACATAAGGCTTTCTTCAATTCATCAAATGCCTGTTGAGCTTCTGCGCACCACTCAAATGCATCTTTCTTAGTTAACGTTGTCAATGGTCTTGCAATTGTACCAAAGTCTTTAACAAACCTCCTATAGTAGCCTGCTAACCCCAAAAATCCTTTCAGTTGCTTCACCTTCGACGGTTCAGGCCACTCTTGTACAGCTCTTATCTTATTAGGATCTGTAGATATGCCTTTCTTCTCGATGTAGTGACCAAGGTACTCCACCTTACTAGTCGCAAAAGCACATTTACTTTCCTTAGCAAAGAGACTGTTACTTCTCATCACTTCAAATACCTTCTTGAGATGATCACAGTGTGACTCTAACGAGTTACTGTACACTAATATATCATCAAAGAAGATCAAAACAAACTTCCTCAAGAACTCCCTGAACACTGAATTCATAAGGCCTTGGAATGTTGCAGGAGCATTTGTGAGGCCAAAGGGCATCACTATGTATTCATAATGACCACTATGAGTTTTGAAAGCTGTTTTGTGTATATCATCAACCTCCATTCTAACCTGATGATAACCAGCTCGCAAATCTATCTTAGAATAGATCATTGATCCTCCAAGCTCATCCATCAAATCCTCAATTAGTGGTATAGGGAATCGATTCTTTATGGTCAACTCATTCAACCTTCGATAGTCAACACATAATCTCCAAGTTCCATCCTTCTTCTTGACTAAAACAACAGGAGAAGCATAAGGACTGCTGCTTGGTTGAATCGTACCACTCTGTAACATCTCTTGGACTATTTTGTCTATCTCATTCTTCTGGTACAACGCGTACCTGTACGGCCTTTGATTAACTGGATTTGCACCTTCTTGTAATGGTATCCTGTGGTTATGGTGCTCTCGAAATGGTGGCAATTGTGTTGGCTCTCGAAATATGTCCGCATACTCTGCCAAGAGCTTTCGAATTGCAGGTTCCATATCACTCTGATCCTCAGCCACCTCTACTGCACATAACTCCATCTCCTTTTCCTCATTTGCTTCACAAGCGTAGATCATTGATAGTTGAGGTTCTGAACCCATAATCTTACTGATCTTGTTTGCCTTAGATTCACGAACTGATCCCGGGTGAATGCCATTCAAAGTTACTCTCTTAGAACCAAATTTGAACTGCATAATCAGTTTATCAAAATCCCAAATGATAGGTCCTAGTGTTCTCAACCACTGCACGCCGAGTACCATATCACAGTTTCCCAACGCAATGACCATGAAGTCTGCTTGAAACACATGATGCTGGAAATTCCATTGTAACTTCTCAATTCGTCCTGTTACACGTAGTTGCCCTCCATCAGCCACTGTTACTCTGGCTAATCCCGGAGGTTTCACCTTGCATCCCAAGCGCTCTGCCACTCTAGTATCCATAAAGTTGTGAGTTGAACCCGAATCTATTAACACAAAGATTGGTCTTTTACTATGAATTCCCTTGACTTTCATAGTAGAATAGTCAGAAGTGCCTGTCACTGCATTTACAGATATATGAGCAATATCGCAATTCTCCTGTTGCTCCAATATGGCTCGTACTTCTGCATCTTCTACCTCTTCTTCTTCTTCAACAGAATCCAACAAATATAACTGCGCTTTCTTATGAGTTAAGGCATGAGCTGGAGAGAATTTCTCATCACAGAAATAACAAAGACCTTTAGCCCTTCTTTCACTCATTTCAGCTGGTGTTAAGAATTTCCTTGGTTGCAGTATGGGGTTCTTAACTTGTTCCGTCTTAGTAGAACTCATTGCCTTCACTTCATCTTCTTTCTTTGCATTCCCATTGTTCTTATTGAAGTTACTCTTGATCCCTGACCATGGTGATTGCTTCTTAGGGTGCGCCATTTCATACAACCGTCCCAAAACAAAGCATTGCCGTACAGATTGAGGTTGAAACATTCGCACATGCATTTGTGTATCATTCCTCAAACCCGCTAAGTAAGCACTGATCAAATACTGCTCTGAAAGTTTTACTCTGGCCCTGATGACTTCAAATTTCTCATTATACTCCGTGATACCATCCGTTTCCTGCAGATGTTTCAGCTCAGCAATAGGATCATCAAGTACCTCTTCAAATCTCTCCAACAACAAAAGTCTGTAGGATTTCCACTCCATCAACAATTCAGTATTAATATCTGATTGCATAATCGCTTGATGCCAAGTACTAGCAGGTGCATCAAAATGAATCGATGAAATTCTCACTTTCAAATCTTCCGGAGTTCCATCGATGAGAAAAAATTCCTCAACCTTGAACAACCACTCCCTAACCTTATCACCATTAAAACGTGGAAAATCCAATCTTCCTAGTCTCGTCATTCCAGTGTAGTGAGTGTTCGTACCAGATCTCGAAGAGCGAGGGTGATTGATTCCATTATCTTGAACGTCTTGATTCGGATCACGCTGAGATCGCTCGATGCTGGTGATCGCCCTCTCTGTTTTCTCTGAAATAGCTTGAATCGCTTCGAATATGTCAGCTACGCTTCGATCGATCTTCGTGTTCTGGTCCGCGATCGTCTCTTCCATTCGAATAATCCTTGATCCAAGTGCTTCTGAAGTTTCTCGAACAACTGCCTCCTTCAACATTTGTTGTGCTCTCGTTTCCGCCATTGATGCCGAGGATGACGAAGCTCTGATACCTT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_58Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
269Start:
5084063End:
5084331Strand:
->B1_LTR-Gypsy_58
AGGAACTGATGTTCATAAAACAACGGTTCCACTCACACAATCGAAGATATCGCAATAGAATCAACCTTCAAATTGATATGAGAATCACAAGTTTACAGAGTTCTAGAGAGAGAAAGTTCTTTACACAATTTTCTGAATGATCTGAAAGAAAGATTGAAAAACAGAGTTTATACGAGTTTGTTAGCATCGTAACAAACTCTTATTCGCCACCGTACACGTGTCAACATCTTCTTCCCCTTCTTTATTCGAATCTTCCCTCCATTCTTCTT
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_59Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
229Start:
5089751End:
5089979Strand:
->B1_LTR-Gypsy_59
GGATCTGACTTGTGTAACCGCAGCGATTGCGGATGCGGTTGTGGGCGGTTACGGATGCGGGTGGTTGCGGTTTTATGTATTTTTAAAAAATTTGTACGATGGGTACAACGGTTAGAAATTGATACGTTTGCGGGATATTTATGACTGGTTCACCATCAAATCCAGCAGTGGTAAAATAATAAATTAATAATATTTATATTTCATATAATTATAAAAATATGAAAAATCA
Brassica nigra (Ni100_V1.0)
ID:
B1_LTR-Gypsy_60Class:
RetrotransposonsOrder:
LTRSuperfamily:
LTR-GypsyLength:
84Start:
5248501End:
5248584Strand:
+>B1_LTR-Gypsy_60
ATTTGCTTCATGTATGTCTTCTATTTAAAAACCTAAAAAGAGACGGTCTAAACTACCCAAAAGAAAACTTGTGTTGTGTTTTTT