ID Class Order Superfamily Length Start End Strand View
utg867_LTR-Gypsy_123541 RetrotransposonsLTRLTR-Gypsy16412186401218803+
utg867_LTR-Gypsy_123542 RetrotransposonsLTRLTR-Gypsy67312365861237258-
utg867_LTR-Gypsy_123543 RetrotransposonsLTRLTR-Gypsy64612624891263134-
utg867_LTR-Gypsy_123544 RetrotransposonsLTRLTR-Gypsy79012707321271521-
utg867_LTR-Gypsy_123545 RetrotransposonsLTRLTR-Gypsy31512715761271890-
utg9837_LTR-Gypsy_123546 RetrotransposonsLTRLTR-Gypsy1411624716387+
utg9837_LTR-Gypsy_123547 RetrotransposonsLTRLTR-Gypsy1397525875396+
utg9987_LTR-Gypsy_123548 RetrotransposonsLTRLTR-Gypsy291200490+
utg9987_LTR-Gypsy_123549 RetrotransposonsLTRLTR-Gypsy89467297622+
utg9987_LTR-Gypsy_123550 RetrotransposonsLTRLTR-Gypsy64986759323+
utg9987_LTR-Gypsy_123551 RetrotransposonsLTRLTR-Gypsy29299783100074+
utg9987_LTR-Gypsy_123552 RetrotransposonsLTRLTR-Gypsy213105090105302+
utg9987_LTR-Gypsy_123553 RetrotransposonsLTRLTR-Gypsy906106340107245+
utg9987_LTR-Gypsy_123554 RetrotransposonsLTRLTR-Gypsy925108018108942+

< 6174 6175 6176 6177 6178 > Total 6178


Brassica nigra (Ni100_V1.0)

ID:

utg867_LTR-Gypsy_123541

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

164

Start:

1218640  

End:

1218803

Strand:

+

>utg867_LTR-Gypsy_123541

CTTTCTTGTGACTAATCTGTTTCCTTTTGATGTAGGAGATACAGATTTGAGGTCAAATCTTTTCAAAGGAGGAGGGGATGATGCAACCCAGATTAGCTATGCAACCTTGGACGAGCTGAAACCACTTGAGGAGACTAAGCACGAGCGGAAACCAGCTAAGGACA

Brassica nigra (Ni100_V1.0)

ID:

utg867_LTR-Gypsy_123542

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

673

Start:

1236586  

End:

1237258

Strand:

-

>utg867_LTR-Gypsy_123542

AACACTTAGACTATCCAAAATTACTTGTTGATGTTGATAGAGATCAGAACATAAACAAGGCAAATTATGATCAAACAAGATTCAGAGAATGCTTTGAAAAGAAAAGAGTTTGATGATTTTATTAGGGAATTTCGTCCATCATATAAAGAAAAGAAGACTGTACATGCACAGCTTCTTGGAAACACACAAAACAATTAATACAAACAAAGACTAAAGTTCAAATTTAAAAGATAGGCTCCCCTCCTTTATTTTGGACGAAAATTGGACTAGAAATGGGCCTGGTTTCATCAAGAGGCTAATGTGTAGTGTTGTGGCCAAGCTTTATTAAAAACCTTGCTTAGAAAACCCAATAGGACAAAACTAAGCCAAGGAAAGGAGTGCAAGTCACAACACCTCTCTTGATGAAAATCTAAGTGACTTGGATCACAACCAGTGTAGTTGGATCAGCAAACCTTAGACTGCCCTGAATAATGTAGAGTAGACATAGGAAAACTTGTTGGAATCTTGCTTGTCTCGACCTAGTCATTGGACCAAGTAGAATGCTCAAGTCCTGGTCTCTTGCTTCTCCTTCTTTGAACTGTTCCATGATGTCTTCTTCTTCATCCTTAATTTCTGGTTCAAGCTGTTCCTTCTCCTTAGTTCCATTGCTGGTCAGGATCATATCATCTTCTCC

Brassica nigra (Ni100_V1.0)

ID:

utg867_LTR-Gypsy_123543

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

646

Start:

1262489  

End:

1263134

Strand:

-

>utg867_LTR-Gypsy_123543

TGATTGGACCAAACTCACGAGGGCTGATCCAACAAGCTAAGGCGGGATCGAACCGGCACGATAGGACCGAGACCGGGACGAGGGCCGCGGATCGACGCCAGGCCGACCCGCGACGGTGCCGCCGGGCGCCAGGCCGGGTGCCGCCGGCGCCAGGCCAGCCAGCGTCCAGCGTGCCGCCGGCACCAGGCCAGCCCGCGTCCCGGGTGCCGCCGGGCGCCAGGCCGGGTGCCGCCGGCGCCAGGCCAGCCAGCGTCCCGCTGCCGCCGGGCGCCAGGCCGCCCGTCCGCCGCCGGGCGCCAGGCCGTGGTGCCGCCGGGCGCCAGGCCAGCCAGCGTCCGCCGGGCGCCAGGCCAACCCGCTGCCCCGCTGCCGCCGGCGCCAGGCCGGGTGCCGCCGGCGCCAGGCCGCCCGCGGACGGGTGCCGCCGCGCCAGGCCGGTGCCGCCGGGCGCCTGGCCAGCCCGCGTGCCGCCGGGCGCCAGGCCGGGTGCCGCTGGCGCCAGGCCAGCCAGCGCCCGCATGCCGCCGGGCGCCAGGCCGGGTGCCGCTGGCGCCAGGCCGCCCGCTGCGGACGGCCGCCGGGCGCCAGGCGGGTGCCGCCGGCGCCAGGCCAGCCAGCGTCCAGCGTGCCGCCGGCGCCAGGCCGG

Brassica nigra (Ni100_V1.0)

ID:

utg867_LTR-Gypsy_123544

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

790

Start:

1270732  

End:

1271521

Strand:

-

>utg867_LTR-Gypsy_123544

GGATCGCCGCCGGGCGCCAGGCCGGGTGCCGCCGCGCCAGGCCGGGTGCCGCCGGGCGCCAGGCCGGTGCCGCCGGGCGCCAGGCCAGCCCGCTGCCCCGCGCCAGCCGGGTGCCGCCGGCGCCAGGCCAGCCCGCTGCCGCCGCCGGGCGCCAGGCCGGGTGCCGCGGGCGCCATGCCGCCCGCTGCCCTGTGTCGCCGGGCGCCAGGCCGGTGCCGCCGGCGCCAGGCCAGCCTGCCCCGCTGCCGCCGGCGCCAGGCCAACCCGCTGCCCCGCATGCCGCCGGGCGCCAGGCCGCCCGCTGGACGGTGCTGCCGGCGCCAGGCCGGGTGCCGCCGGCGCCAGGCCAGCCCGCTGCCCCGCATGCCGCCGGGCGCCAGGCCGGGTGCCCCGCGCCAGCCAGCCCGCTGCCCGTGCGCGCCGCGCCAGGCCGCCCGCTGGATGGTGCCGCCGGGCGCCAGGCCGGTGCCGCCGGGCGCTAAACAAGCTCGCTGCCCCGCTGCCGCCGCTGCCAGGCCGGGTGCCGCCGCACCAGGCCAGCCCGCCGCACAGGCCAGCCCGCCGACTCAAGCTAGCCGCCGCACCAGGCCAGGGTGCCGCCGGCGCCAGGCCGCCCGCGTGCCGCCGGCGCCAGGCCGCCGCCGGCGCCAGGCCAGCCCTGCCGCCGGCGCCAGGCCGGGTGCCGCCGGGCGCCAGGCCAGCCCGCTGCCCCGCTGCCGCCGCGCCAGGCCGGTTGCCGCCGGGCGCCATGCCGCCCGCTGGCCCCGCGGTGTCGCCGGTGCCAGGCCGG

Brassica nigra (Ni100_V1.0)

ID:

utg867_LTR-Gypsy_123545

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

315

Start:

1271576  

End:

1271890

Strand:

-

>utg867_LTR-Gypsy_123545

CCCGCTGATGTGCCGCCGGGCGCCAGGCCGGTGCCGCCGGCGCCAAACAAGCCCGCTGCCCCGCTGCCGCCGGCGCCAGGCCGGGTGCCGCCGGCACCAGGCCAGCCCGCTGCCCCGCCGCCGCCAGGCCGGTGCCGCCGGGCGCCAGGCCGGTGCCGCCGGGCGCCAAGCCGCCCGCCCCCGCTGCCGCCGCGCCAGGCCGCCTTGTCGTCCGTGGGTTTTTCGTTGTTCGATCTTTCCCTCGCCGCCGCTTACGGAAATCTTTAAGTTTCGGGAAGGTCCTTAGCCGTAGATTTCGAGATAACCGTTTTTGAC

Brassica nigra (Ni100_V1.0)

ID:

utg9837_LTR-Gypsy_123546

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

141

Start:

16247  

End:

16387

Strand:

+

>utg9837_LTR-Gypsy_123546

TTTTAAGTTTTCCTTTTTTCTTATAAGTTTATCTTTCCTTTTCTTAATCAGTTTTGATATTTCTTCTTTCTTCTATATAATGTAGCCTTGCCGCAAGGGGTTTTTAGCAATCAATCAATAAACGTTTTCTTAAACCTGTTA

Brassica nigra (Ni100_V1.0)

ID:

utg9837_LTR-Gypsy_123547

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

139

Start:

75258  

End:

75396

Strand:

+

>utg9837_LTR-Gypsy_123547

TTTTAAGTTTTCCTTTTTCTTATAAGTTTATCTTTCCTTTTCTTAATCAGTTTTGATATTTCTTCTTTCTTCTATATAATGTAGCCTTGCCGCAAGGGTTTTTAGCAATCAATCAATAAACGTTTTCTTAAACCTGTTA

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123548

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

291

Start:

200  

End:

490

Strand:

+

>utg9987_LTR-Gypsy_123548

CTCCAGAAGTCAAGCTTTCAGTGGAAATAGAAAGATGTAGAATGACCTAAACAGAAAGATAAACGTTGTTCACAGTTAACTCTTAAAGAAATTTGATGCCCTTAATGATCACATTAAAAGGTTAGAGGGCCAGTCGCTGAAAGCGGGATTGCTATCAAGAGAGAAGTAGGATGCCTCCACGGGAGGATTGACACCAATCTGAGGCGTCATGTCAGTGCCATAATCTTAAGGAGCGGAAAAACCCTTTCCTCGAATTCTAAAGAAAACACTTCCTTAGATAAACCTGCTGAA

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123549

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

894

Start:

6729  

End:

7622

Strand:

+

>utg9987_LTR-Gypsy_123549

TACACCGACTGTGCACTCATAGAGACGTGGGACGACTACGACACCTTGTTCTACAATGCATGGCTGGACGTAGCCATTGAGCCTACACGGTTCATCGATCAGGCTACCGTGAAGAGGCTCGGGATCGAGTCAGATCTGACCGACATGATCGGGCAGCTGGGGTTTGGCTCCATGGCCACTCATCCGTACGAGCTTCATGTCTCTATGGTCAGACAGTTCATGGCCACAGCCCAGCTCACCTACCGTAACTCGAGGGCTAGGGGTTGCGGAGACGGCACTTTGTCCTTCCGCAAGAGGCATCAGATACAGTATCTCCATCACCGAACTCTACAAAGCTACGGGTTCACAGACCCCACTGCCACTGCCAGCTTCATCCCTGACTTCCCTGGACTACCGGAGTTCTGGGAGACACTTGGTACAGGTCCGTGGAGCTCCGGTTCAGCCACCCAGATGGACATTCGTCACCCCACCTTGCGCTACTTCATGAGGGCTCTCGCCAACACTCGTTTGTGTAAGATGGAGCCCAACAAGGTAAGGATACAAGAGCTCACACTGCTTTATGGTGCAGTGAATGGTTTAGTGGATCTGAGCCATCTCGATGCAGAGGACGGGGTGGTGATACCTAATCTTGGTGCCATCTTTGCTGAGCATCTGGTGGGGCTGAAGATGAAGCCATTCACGGGGATGAGCCAGAAGACGGAGACAGTGGGGAGCCTGCTGACACCGATCTTCATGCATCTGGGCATCCGTTTGGGCGAGGTACCGCCGTGATCACCCGGCTTTTCGGACGAGGGCGCACTCCCACTCGGGCTGGCTGAAGGACAACCTCTTCGGAGTTTCAGGAGAGGACCAGATACCTGCTGCAGCTGCCACACAGGCCCACCACAGACTTTG

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123550

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

649

Start:

8675  

End:

9323

Strand:

+

>utg9987_LTR-Gypsy_123550

GCAAGAAGCTACCAACAACACCTCTGATGCAGCTGGTAACATAGACGGCCGTTTCAAGCCAAACAATCAACACCCTACACCACCATCGATCGACAGAGCTCGACCAGCAATCGACAGGCGTCCAGAGTTTGGACGAAGAGCTTTCCGTTATGGAATTCGGAAGTTCTATTGGGAACAGAAAGATGAGTATGGAGTCTACAGAGATGAGTCTGGATATGCAAGGAGAGTAGATGGCAACATCATCAACATCTCCAAGGAAGATGTTAAAAACTTGCTAAGAAGAGTCTCGGTGGATGAGTGCTCTTACATCTGTCTTCCGGAATATGCCAATTCATTCACAAAGACTAGCTTGGTGTAGGAGATCTACACCAAAGATGAGATCAATAAGATAATCACTGGGATGATTAGTAATCAAAACTGGGAAAAGGAAACCATCAACAAGAGGATTGATGAGGCTCTAACTACACTCAACAACGAGCTCAATTGGCTGGTTAAAAGGAATGAGTACGTACAGAAGGACCTAGAAGCTCTCCGCAGAGTAAATGAAGTACGACAGAAGACTTCAGCATCGATCGATGGGAGCGCTGTTCCATCGTCGATACGCAATCTCACCAGTCGACAACCTACTCAAAGAAGGAAATTGATGAGC

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123551

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

292

Start:

99783  

End:

100074

Strand:

+

>utg9987_LTR-Gypsy_123551

CTCCAGAAGTCAAGCTTTCAGTGGAAATAGAAAGATGTAGAATGACCTAAACAGAAAGATAAACGTTGTTCACAGTTAACTCTTAAAGAAATTTGATGCCCTTAATGATCACATTAAAAGGTTAGAGGGCCAAGTCGCTGAAAACGGGATTGCTATCAAGAGAGAAGTAGGATGCCTCCCTGGGAGGATTGACACCAATCTGAGACGTCATGTCAGTGCCATAATCTTAAGGAGCGGAAAAACCCTTTCCTCGAATTCTAAAGAAAACACTTCCTTAGATAAACCTGCTGAA

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123552

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

213

Start:

105090  

End:

105302

Strand:

+

>utg9987_LTR-Gypsy_123552

GCTCGGGAGAGAGCACCCGCGCGGGACAAAAGCTGGACCGGATGCGCGGCCTGGAGTGCTCGGTCTCACTTACCCGCGCGGGACATGCCAGGAACGGACAGGACGGTGCCCGGCCTACAGTGCTCGGCCTCACTTACCCGCGGGGGACAGGCTAGGAACGGACAGGACGGTGCGCGGGCTGGAGTGCTCGGGTCAGTACACCCGCGAGACACA

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123553

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

906

Start:

106340  

End:

107245

Strand:

+

>utg9987_LTR-Gypsy_123553

TACACCGACTGTGCACTCATAGAGACGTGGGACGACTACGACACCTTGTTCTACAATGCATGGCTGGACGTAGCCATTGAGCCTACACTGTTCATCGATCAGGCTACCGTGAAGAGGCTCGTGATCGAATCGGATCTGACCGACATGATCGGGCAGCTGGGGTTTGGCTCCATGGCCACTCATCCGTACGAGCTTCATGTCTCTATGGTCAGACAGTTCATGGCCACAGCCCAGCTCACCTACCGTAACTCGAGGGCTAGGGTTGCAGGAGACGGCACTTTGTCCTTCTTCGCAAGAGGCATCAGATACAGTATCTCCATCACCGAACTCTACAAATCTACGGGTTCACAGACCCCACTGCCACTGCCAGCTTCATCCCTGACTTCCCTGGACTACCGGAGTTCTGGGAGACACTTGGTACAGGTCCGTGGAGCTCCGGTTCAGCCACCCAGATGGACATTCGTCACCCCACCTTGCGCTACTTCATGAGGGCTCTCGCCAACACTCGTTTGTGTAAGATGGAGCCCAACAAGGTAAGGATACAAGAGCTCACACTGCTTTATGGTGCAGTGAATGGTTTAGTGGATCTGAGCCATCTCGATGCAGAGGACGGGGTGGTGATACCTAATCTTGGTGCCATCTTTGCTGAGCATCTGGTGGGGCTGAAGATGAAGCCATTCACGGGGATGAGCCAGAAGACGGAGACAGTGGGGAGCCTGCTGACACCGATCTTCATGCATCTGGGCATTCGTTTGGACGAGGGTACCGCCGTGATCACCCGACGCTTTCTGGACGAGGCGCACCTACTCCACTCGGGCTGGCTGAAGGACAACCTCTTCTGGAGTTTCAGGAGAGAGGACCAGATACTTCTGCTGCAGCTGCCACACAGGCCCACCACAGATTTTG

Brassica nigra (Ni100_V1.0)

ID:

utg9987_LTR-Gypsy_123554

Class:

Retrotransposons

Order:

LTR

Superfamily:

LTR-Gypsy

Length:

925

Start:

108018  

End:

108942

Strand:

+

>utg9987_LTR-Gypsy_123554

ACCTTCCCCATCAATTAACAACACTGCTTCAACATCTATCGATATCCACCCTTCCACATCGATCGACATGAATACAAACCCTAGATCCGAGGTATGCAAACAAGACCCTATAGATTATGGAAATCTAACACCGGATGAGTTTGGTATTTTCAGGGATCCAAATGGCCATCCACGAACAATAGATGGAAGAATTCTTCAAGTATCAAGAGAAGATATTGCAGACATTCTTCAGGTTGCCAATGGACCAGACAACTTCTTCCTGCAACAACGCAACAATCCAGAACACCAGCAAGAAGCTACCAACAACACCTCTGATACAGCTGGTAACATAGACGGCCGTTTCAAGCCAAACAATCAACACCCTACACCACCATCGATCGACAGAGCTCGACCAGCGATCGACAGGCGTCCAGAGTTTGGACGAAGAGCTTTCCGTTATGGAATTCGGAAGTTCTATTGGGAACAGAAAGATGAGTATGGAGTCTACAGAGATGAGTCTGGATATGCAAGGGGAGTAGATGGCAACATCATCAACTTGCTAAAAACTTGCTAAGAAGAGCCTCGATGGATGAGTGCTCTTACATCTGTCTTCCGGAATATGCCAATTCATTCACAAAGACTAGCTTGGTGTAGGAGATCTACACCAAAGATGAGATCAATAAGATAATCACTGGGATGATTAGTAATCAAAACTGGGAAAAGGAAACCATCAACAAGAGGATTGATGAGGCTCTAACTACACTCAACAACGAGCTCAATTGGCTGGTCAAAAGGAATGAGTACGTACAGAAGGACCTAGAAGCTCTCCGCAGAGTAAATGAAGTACGACAGAAGACTTCAGCATCGATCGATGGGAACGCTGTTCCATCGATCGATACGCAGTCTCACCAGTCGACAACCTACTCAAAGAAGGAAATTGATGAGC