TBGR-Browse-Bna-SINE.SINE

ID	Class	Order	Superfamily	Length	Start	End	Strand
scaffoldC04_SINE_61	Retrotransposons	SINE	SINE	159	19797623	19797781	+
scaffoldC04_SINE_62	Retrotransposons	SINE	SINE	113	36566840	36566952	-
scaffoldC04_SINE_63	Retrotransposons	SINE	SINE	153	37766544	37766696	+
scaffoldC04_SINE_64	Retrotransposons	SINE	SINE	149	39947711	39947859	+
scaffoldC04_SINE_65	Retrotransposons	SINE	SINE	83	40915542	40915624	-
scaffoldC04_SINE_66	Retrotransposons	SINE	SINE	163	42018616	42018778	-
scaffoldC04_SINE_67	Retrotransposons	SINE	SINE	162	51434943	51435104	-
scaffoldC04_SINE_68	Retrotransposons	SINE	SINE	161	55541264	55541424	-
scaffoldC04_SINE_69	Retrotransposons	SINE	SINE	161	69395044	69395204	+
scaffoldC04_SINE_70	Retrotransposons	SINE	SINE	160	69961498	69961657	+
scaffoldC05_SINE_71	Retrotransposons	SINE	SINE	166	12590668	12590833	+
scaffoldC05_SINE_72	Retrotransposons	SINE	SINE	188	28653235	28653422	+
scaffoldC05_SINE_73	Retrotransposons	SINE	SINE	159	35752683	35752841	-
scaffoldC05_SINE_74	Retrotransposons	SINE	SINE	162	38834822	38834983	+
scaffoldC05_SINE_75	Retrotransposons	SINE	SINE	101	39031593	39031693	-
scaffoldC05_SINE_76	Retrotransposons	SINE	SINE	101	39534356	39534456	+
scaffoldC05_SINE_77	Retrotransposons	SINE	SINE	123	50698153	50698275	+
scaffoldC05_SINE_78	Retrotransposons	SINE	SINE	159	52843732	52843890	-
scaffoldC05_SINE_79	Retrotransposons	SINE	SINE	100	53272876	53272975	+
scaffoldC06_SINE_80	Retrotransposons	SINE	SINE	101	17961549	17961649	+

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_61

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

19797623

End:

19797781

Strand:

+

>scaffoldC04_SINE_61

ATCCAGGACCTCGTAGTCCCGTGGTACTACGTCCTTGGGGAGTGGAGGTCGGCTGTTCGACTCGCGTGGAGGGGGAGGCGTGTCCAGGGCCCGTAAAAAGGTACAGACAAAGGCTGACGCCGGACTTAGGTGCTGGCCGCAAGGTCAACACCTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_62

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

113

Start:

36566840

End:

36566952

Strand:

-

>scaffoldC04_SINE_62

TTAACCAGGGGAATGGGTTCACACCTTCGGTCCTAATCCTCCCCCTAGGCCCGGAGCCAGCCTGCGTCTGTATCTGTTAAGGCTCTGGACACTCCTCCCACGGTGGGTCGAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_63

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

153

Start:

37766544

End:

37766696

Strand:

+

>scaffoldC04_SINE_63

GAGCTCGTAGTCCAGTGGTACTACCTCCGGGAGGGGAGGTCGGCTGTTCGACTCGCGGGGAGGGGGAGGCGTGCCCAGGGCCCGTAAAAAGGTACAGGCAAAGGCTGGCGCCGGGCCTAGGTGGGGGGCCGCAAGGTCAACACCTGGTTAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_64

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

149

Start:

39947711

End:

39947859

Strand:

+

>scaffoldC04_SINE_64

ACCCAGGACCTCGTAGTCCAGTGGTATCCTACTTGGGGAGGGGAGGTGACCGGTTCGACTCGCGGGGAGGGGGAGGCGTGTCCAGGGCCCGTAAAAAGGTACAGACAAAGGCTGGCGCCGGGCCTAGGTGGTGGGCCGCAAGGTCAACA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_65

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

83

Start:

40915542

End:

40915624

Strand:

-

>scaffoldC04_SINE_65

CTAGGCCCGGAGCTAGCCTTTGTCTGTACCTTTTACGGTATTGGACACTCTTCCATGTCCAAGACTCGAACCGATGACCTTTC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_66

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

163

Start:

42018616

End:

42018778

Strand:

-

>scaffoldC04_SINE_66

TTAACCAGGTGTTGACCAGCCTTCGGCCAGCCCACCACCTAGGCCCGACGCCAGCCTGCGCCTGTACCGGTTAGGGCCCTGGGCACGCCTTCCCGCCTGCGAATCGAACAGCTGACCTCCCAAGGTTGAGGGGCAGGTACCACTGGACTATCGAGTCCGGGTA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_67

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

162

Start:

51434943

End:

51435104

Strand:

-

>scaffoldC04_SINE_67

GATTAACCAGGTGTTGACCTTGCGGCCCCCCACCTAGGCCCGGCGCCAGCCTTTGCCTGTACCTTTTTACGGGCCCTGGGCACGCCTCCCCCTCCCCGCAAGTCGAACAGCCGACCTCCCTTCCCCAAGGAGGTAGTACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_68

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

161

Start:

55541264

End:

55541424

Strand:

-

>scaffoldC04_SINE_68

GATTAACCAGGTGTTGACCTTGCGGCCCCCCACCTAGGCCCGGCGCCAGCTTTTGCCTGTACCCACAAGAGGCCCTGGGCACGCCTCCCCCTCCCCGCGAGTCGAACAGCCGACCTCCCCTCCCCAAGGAGGTAGTACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_69

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

161

Start:

69395044

End:

69395204

Strand:

+

>scaffoldC04_SINE_69

ACCCAGGACCTCGTAGTCCAGTGGTACTACCTCCTTGAGAAGGGGAGGTCGGATATTCGACTCGCGGGGAGGGGGAGGCGTGCCCAGGACCTCATGTGGGTACAGGCAAAGGCTGGCGCCGGGCCTAGGTGGGGGGCCGCAAGATCAACACCTGGTTAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC04_SINE_70

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

160

Start:

69961498

End:

69961657

Strand:

+

>scaffoldC04_SINE_70

ACCCAGGACCTCGTAGTCCAGTGGTACTATCTTCTTGGGAAGGAGAGGTCGGCTGTTCGACTCGCGTGGAGGGGGATGCGTGTCCAGAGCCCGTAAAAAGGTACAGACAAAAGCTGGCGCCGGGCCTAGGTGGTGGGCCGCAAAGTCAACACCTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_71

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

166

Start:

12590668

End:

12590833

Strand:

+

>scaffoldC05_SINE_71

ACCCGGACTCGATAGTCTAGTGGTACCTGCCCCTCAACTTTGGGAGGGAGGTCAGCTGTTCGATTCGCAGGCGGGGAGGCATGCCTAGGGCCCTAACCGGTACAGGCGCAGGCTGGCGCCGGACCTAGGTGGTGGGCTGGCCGAAGGTTTGTCAACACCTGGTTAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_72

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

188

Start:

28653235

End:

28653422

Strand:

+

>scaffoldC05_SINE_72

TACCCGGGCTTGATAGTCCAGTGGTACTTGGGCTTCCGCCTTGAGCTCGGCTGGAGGTCTGGGGTTCGAGCTAAGATAGAGGACTCTTGAGCGAGGAAGCGTGCCCAGGGCCCTAACCGGTACAGGCGCAGGCTGGCGTCGGGCCTAGGTGGTGGACTGACCGAAGACTGGTCAACACCTGGTTAAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_73

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

35752683

End:

35752841

Strand:

-

>scaffoldC05_SINE_73

ATTAACCAGGTGTTGACCTTGCGGCCCACCACCTAGGCCCGGCGCCAGCCTTTGTCTGTACCTTCTTACGGGCCCTGGACACGCCTCCCCCTCCCCGCGAGTCGAACCGGTCACCTCCCCTCCACAAGGAGGATACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_74

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

162

Start:

38834822

End:

38834983

Strand:

+

>scaffoldC05_SINE_74

ACCCAGGACCTCGTAGTCCAGTGGTACTACCTCCTTGGGGAGGGGAGGTCGGCTGTTCGACTCGCGGGGAGGGGGAGGCGTGTCCAGAGCCCGTAACAAGGTACAGACAAAGGCTGGCGCCGGGCCTAGGTGGGGGGCCGCAAGGTCAACACCTGGTTAATC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_75

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

39031593

End:

39031693

Strand:

-

>scaffoldC05_SINE_75

GTTTAACCAGGTGGTGGGTTCGGGCCTTCGGCCCTACTCCCTCCCCCTAGGCCCGGAGGCAGCCTGCGTCTGTACCGGTTAAGGCCCTGGACACTCCTCCC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_76

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

39534356

End:

39534456

Strand:

+

>scaffoldC05_SINE_76

GGGAGGAGTGTCCAGGACCTTAACCGGTACAGACGCAGACTGGCTCCGGACCTAGGGGGAGGGAGTAGGGCCGAAGGCCCGAACCCACCACCTGGTTAAAC

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_77

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

123

Start:

50698153

End:

50698275

Strand:

+

>scaffoldC05_SINE_77

GAGAGGTCACGAGTTCGAGTCTCGGGCGGGGAGGAGTATCCAGGACCGTAATGGTACAGACGCAGGCTGGCTCCGGGCCTAGGAGGGGATTAGGGCCGAAGGCCCGAACCCCGCCTGGTTAAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_78

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

159

Start:

52843732

End:

52843890

Strand:

-

>scaffoldC05_SINE_78

GATTAACCAGGTGTTAACCTTGCGGCCCCCCACCTAGGCTCGGCGCCAGCCTTTGCCTGTACTTTTTTACGGGCCCTGAGCACGCCTCCCCTTCTCCGCGAGTCGAACAGCCGACCTCCCCTCCCGGAGGTAGTACCACTGGACTACGAGGTCCTGGGT

Brassica napus (ZS11_V2.0)

ID:

scaffoldC05_SINE_79

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

100

Start:

53272876

End:

53272975

Strand:

+

>scaffoldC05_SINE_79

GGGAGGAGTGTCCAGGGCCTTAACCGGTACAGACGCAGGCTGGCTCCGGGCCTAGGGGGAGGGAGTAGGGCCGAAGGCCCGAACCCACCACCTGGTTAAA

Brassica napus (ZS11_V2.0)

ID:

scaffoldC06_SINE_80

Class:

Retrotransposons

Order:

SINE

Superfamily:

SINE

Length:

101

Start:

17961549

End:

17961649

Strand:

+

>scaffoldC06_SINE_80

GGGAGGAGTGTCCAGGGCCTTAACCGGTACAGACGCAGGCTGGCTCCGGGCCTAGGGGGAGGGAGTAGGGCCGAAGGCCCGAACCCACCACCTGGTTAAAC